RNA–Protein interactions for RNA: ENST00000600719.5

RAB11B-204, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB11B, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-204ENST00000600719 NISCHQ9Y2I1 1504 aa34.95■■■■□ 3.19
RAB11B-204ENST00000600719 CCDC180Q9P1Z9 1646 aa30.87■■■□□ 2.53
RAB11B-204ENST00000600719 ABCC9O60706 1549 aa29.78■■■□□ 2.36
RAB11B-204ENST00000600719 ZCCHC6Q5VYS8 1495 aaKnown RBP29.2■■■□□ 2.26
RAB11B-204ENST00000600719 DCAF1Q9Y4B6 1507 aa28.96■■■□□ 2.23
RAB11B-204ENST00000600719 MYO15BQ96JP2 1530 aa28.94■■■□□ 2.22
RAB11B-204ENST00000600719 NACADO15069 1562 aa28.93■■■□□ 2.22
RAB11B-204ENST00000600719 DCAF8L2P0C7V8 631 aa28.93■■■□□ 2.22
RAB11B-204ENST00000600719 RB1CC1Q8TDY2 1594 aa28.84■■■□□ 2.21
RAB11B-204ENST00000600719 UNC13AQ9UPW8 1703 aa28.21■■■□□ 2.11
RAB11B-204ENST00000600719 SCRIBQ14160 1630 aa28.17■■■□□ 2.1
RAB11B-204ENST00000600719 BICRAQ9NZM4 1560 aa28.01■■■□□ 2.07
RAB11B-204ENST00000600719 PABPN1Q86U42 306 aaKnown RBP eCLIP27.91■■■□□ 2.06
RAB11B-204ENST00000600719 SHROOM4Q9ULL8 1493 aa27.79■■■□□ 2.04
RAB11B-204ENST00000600719 EIF4G1Q04637 1599 aaKnown RBP27.19■■□□□ 1.94
RAB11B-204ENST00000600719 CECR2Q9BXF3 1484 aa27.19■■□□□ 1.94
RAB11B-204ENST00000600719 BAZ1AQ9NRL2 1556 aaPredicted RBP27.03■■□□□ 1.92
RAB11B-204ENST00000600719 DNAJC5BQ9UF47 199 aa27.03■■□□□ 1.92
RAB11B-204ENST00000600719 SMARCA4P51532 1647 aa27.01■■□□□ 1.92
RAB11B-204ENST00000600719 CC2D2AQ9P2K1 1620 aa26.98■■□□□ 1.91
RAB11B-204ENST00000600719 MROH2BQ7Z745 1585 aa26.94■■□□□ 1.9
RAB11B-204ENST00000600719 RSF1Q96T23 1441 aaPredicted RBP26.8■■□□□ 1.88
RAB11B-204ENST00000600719 PEG3Q9GZU2 1588 aa26.79■■□□□ 1.88
RAB11B-204ENST00000600719 ATAD2BQ9ULI0 1458 aa26.78■■□□□ 1.88
RAB11B-204ENST00000600719 SMARCA2P51531 1590 aa26.75■■□□□ 1.87
RAB11B-204ENST00000600719 NCAPD3P42695 1498 aa26.72■■□□□ 1.87
RAB11B-204ENST00000600719 WIZO95785 1651 aa26.66■■□□□ 1.86
RAB11B-204ENST00000600719 HMGXB3Q12766 1538 aa26.6■■□□□ 1.85
RAB11B-204ENST00000600719 BAZ1BQ9UIG0 1483 aaKnown RBP26.54■■□□□ 1.84
RAB11B-204ENST00000600719 TOP2AP11388 1531 aaKnown RBP26.39■■□□□ 1.82
RAB11B-204ENST00000600719 SUPT5HO00267 1087 aaKnown RBP26.35■■□□□ 1.81
RAB11B-204ENST00000600719 CCDC88BA6NC98 1476 aa26.11■■□□□ 1.77
RAB11B-204ENST00000600719 CADPSQ9ULU8 1353 aa25.94■■□□□ 1.74
RAB11B-204ENST00000600719 NESP48681 1621 aa25.92■■□□□ 1.74
RAB11B-204ENST00000600719 LAMC3Q9Y6N6 1575 aa25.9■■□□□ 1.74
RAB11B-204ENST00000600719 CFTRP13569 1480 aa25.89■■□□□ 1.73
RAB11B-204ENST00000600719 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
RAB11B-204ENST00000600719 PRDM2Q13029 1718 aa25.68■■□□□ 1.7
RAB11B-204ENST00000600719 FANCD2Q9BXW9 1451 aa25.62■■□□□ 1.69
RAB11B-204ENST00000600719 KIF21AQ7Z4S6 1674 aa25.61■■□□□ 1.69
RAB11B-204ENST00000600719 ERCC6Q03468 1493 aa25.6■■□□□ 1.69
RAB11B-204ENST00000600719 CEP164Q9UPV0 1460 aa25.53■■□□□ 1.68
RAB11B-204ENST00000600719 THOC2Q8NI27 1593 aaKnown RBP25.44■■□□□ 1.66
RAB11B-204ENST00000600719 MRC2Q9UBG0 1479 aa25.43■■□□□ 1.66
RAB11B-204ENST00000600719 URB2Q14146 1524 aaKnown RBP25.37■■□□□ 1.65
RAB11B-204ENST00000600719 WDR62O43379 1518 aa25.35■■□□□ 1.65
RAB11B-204ENST00000600719 ABCC8Q09428 1581 aa25.27■■□□□ 1.64
RAB11B-204ENST00000600719 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
RAB11B-204ENST00000600719 DNMBPQ6XZF7 1577 aa25.27■■□□□ 1.64
RAB11B-204ENST00000600719 CUX1P39880 1505 aa25.25■■□□□ 1.63
RAB11B-204ENST00000600719 CUX2O14529 1486 aa25.23■■□□□ 1.63
RAB11B-204ENST00000600719 WRNQ14191 1432 aaPredicted RBP eCLIP25.21■■□□□ 1.63
RAB11B-204ENST00000600719 SYNJ1O43426 1573 aa25.15■■□□□ 1.62
RAB11B-204ENST00000600719 TOP2BQ02880 1626 aa25.14■■□□□ 1.61
RAB11B-204ENST00000600719 BIVM-ERCC5R4GMW8 1640 aa25.12■■□□□ 1.61
RAB11B-204ENST00000600719 POLA1P09884 1462 aaPredicted RBP25.09■■□□□ 1.61
RAB11B-204ENST00000600719 FGD5Q6ZNL6 1462 aa25.08■■□□□ 1.6
RAB11B-204ENST00000600719 IFT140Q96RY7 1462 aa25■■□□□ 1.59
RAB11B-204ENST00000600719 TARBP1Q13395 1621 aaKnown RBP24.99■■□□□ 1.59
RAB11B-204ENST00000600719 SOGA1O94964 1423 aa24.98■■□□□ 1.59
RAB11B-204ENST00000600719 RAD54L2Q9Y4B4 1467 aa24.96■■□□□ 1.59
RAB11B-204ENST00000600719 CHIC1Q5VXU3 224 aa24.89■■□□□ 1.58
RAB11B-204ENST00000600719 TRIM41Q8WV44 630 aa24.88■■□□□ 1.57
RAB11B-204ENST00000600719 ABCA10Q8WWZ4 1543 aa24.87■■□□□ 1.57
RAB11B-204ENST00000600719 ZNF608Q9ULD9 1512 aaPredicted RBP24.86■■□□□ 1.57
RAB11B-204ENST00000600719 WDR97A6NE52 1622 aa24.86■■□□□ 1.57
RAB11B-204ENST00000600719 TDRD9Q8NDG6 1382 aaKnown RBP24.79■■□□□ 1.56
RAB11B-204ENST00000600719 AQRO60306 1485 aaKnown RBP eCLIP24.77■■□□□ 1.561e-11■■□□□ 13.3
RAB11B-204ENST00000600719 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
RAB11B-204ENST00000600719 ABCA5Q8WWZ7 1642 aa24.74■■□□□ 1.55
RAB11B-204ENST00000600719 GAPVD1Q14C86 1478 aa24.7■■□□□ 1.54
RAB11B-204ENST00000600719 KIF27Q86VH2 1401 aa24.65■■□□□ 1.54
RAB11B-204ENST00000600719 GRIN2BQ13224 1484 aa24.64■■□□□ 1.53
RAB11B-204ENST00000600719 PBRM1Q86U86 1689 aa24.59■■□□□ 1.53
RAB11B-204ENST00000600719 RUSC2Q8N2Y8 1516 aa24.59■■□□□ 1.53
RAB11B-204ENST00000600719 ERICH3Q5RHP9 1530 aa24.57■■□□□ 1.52
RAB11B-204ENST00000600719 IGF1RP08069 1367 aa24.54■■□□□ 1.52
RAB11B-204ENST00000600719 SNAPC4Q5SXM2 1469 aa24.53■■□□□ 1.52
RAB11B-204ENST00000600719 MAGI1Q96QZ7 1491 aaPredicted RBP24.53■■□□□ 1.52
RAB11B-204ENST00000600719 EEA1Q15075 1411 aa24.46■■□□□ 1.51
RAB11B-204ENST00000600719 ADAMTS12P58397 1594 aa24.45■■□□□ 1.5
RAB11B-204ENST00000600719 SYNJ2O15056 1496 aa24.44■■□□□ 1.5
RAB11B-204ENST00000600719 FHAD1B1AJZ9 1412 aa24.43■■□□□ 1.5
RAB11B-204ENST00000600719 CUL7Q14999 1698 aa24.41■■□□□ 1.5
RAB11B-204ENST00000600719 CSRNP3Q8WYN3 585 aa24.37■■□□□ 1.49
RAB11B-204ENST00000600719 CARMIL1Q5VZK9 1371 aa24.37■■□□□ 1.49
RAB11B-204ENST00000600719 CHD1O14646 1710 aa24.36■■□□□ 1.49
RAB11B-204ENST00000600719 CHMP7Q8WUX9 453 aaPredicted RBP24.35■■□□□ 1.49
RAB11B-204ENST00000600719 FBLN2P98095 1184 aa24.33■■□□□ 1.49
RAB11B-204ENST00000600719 FAM9AQ8IZU1 332 aaPredicted RBP24.33■■□□□ 1.49
RAB11B-204ENST00000600719 GRIN2AQ12879 1464 aa24.32■■□□□ 1.48
RAB11B-204ENST00000600719 PRXQ9BXM0 1461 aa24.32■■□□□ 1.48
RAB11B-204ENST00000600719 RAPGEF2Q9Y4G8 1499 aa24.26■■□□□ 1.47
RAB11B-204ENST00000600719 OSCARQ8IYS5 282 aa24.25■■□□□ 1.47
RAB11B-204ENST00000600719 NUP160Q12769 1436 aa24.22■■□□□ 1.47
RAB11B-204ENST00000600719 CEP170Q5SW79 1584 aa24.2■■□□□ 1.46
RAB11B-204ENST00000600719 KIF21BO75037 1637 aa24.18■■□□□ 1.46
RAB11B-204ENST00000600719 CLASP1Q7Z460 1538 aa24.15■■□□□ 1.46
RAB11B-204ENST00000600719 KIAA0586Q9BVV6 1533 aa24.09■■□□□ 1.45
RAB11B-204ENST00000600719 GOLGA3Q08378 1498 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms