RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 NISCHQ9Y2I1 1504 aa18.42■□□□□ 0.54
SIN3A-201ENST00000360439 DCAF8L2P0C7V8 631 aa18.02■□□□□ 0.48
SIN3A-201ENST00000360439 PELP1Q8IZL8 1130 aaKnown RBP17.02■□□□□ 0.32
SIN3A-201ENST00000360439 MYT1Q01538 1121 aa16.93■□□□□ 0.3
SIN3A-201ENST00000360439 SHROOM4Q9ULL8 1493 aa16.68■□□□□ 0.26
SIN3A-201ENST00000360439 SUPT5HO00267 1087 aaKnown RBP16.47■□□□□ 0.23
SIN3A-201ENST00000360439 ABCC9O60706 1549 aa16.27■□□□□ 0.2
SIN3A-201ENST00000360439 PABPN1Q86U42 306 aaKnown RBP eCLIP15.88■□□□□ 0.13
SIN3A-201ENST00000360439 TTBK1Q5TCY1 1321 aaPredicted RBP15.83■□□□□ 0.12
SIN3A-201ENST00000360439 ERICH6Q7L0X2 663 aa15.82■□□□□ 0.12
SIN3A-201ENST00000360439 EHMT2Q96KQ7 1210 aa15.72■□□□□ 0.11
SIN3A-201ENST00000360439 CCDC180Q9P1Z9 1646 aa15.49■□□□□ 0.07
SIN3A-201ENST00000360439 FAM9AQ8IZU1 332 aaPredicted RBP15.46■□□□□ 0.07
SIN3A-201ENST00000360439 ZCCHC6Q5VYS8 1495 aaKnown RBP15.43■□□□□ 0.06
SIN3A-201ENST00000360439 SLC24A1O60721 1099 aa15.34■□□□□ 0.05
SIN3A-201ENST00000360439 CENPBP07199 599 aaPredicted RBP15.33■□□□□ 0.04
SIN3A-201ENST00000360439 PRKCSHP14314 528 aaPredicted RBP15.33■□□□□ 0.04
SIN3A-201ENST00000360439 TRIM41Q8WV44 630 aa15.31■□□□□ 0.04
SIN3A-201ENST00000360439 RANGAP1P46060 587 aaPredicted RBP15.29■□□□□ 0.04
SIN3A-201ENST00000360439 HRCP23327 699 aa15.27■□□□□ 0.04
SIN3A-201ENST00000360439 CHIC1Q5VXU3 224 aa15.26■□□□□ 0.03
SIN3A-201ENST00000360439 PCGF6Q9BYE7 350 aa15.25■□□□□ 0.03
SIN3A-201ENST00000360439 BCL11AQ9H165 835 aa15.24■□□□□ 0.03
SIN3A-201ENST00000360439 ZEB1P37275 1124 aaPredicted RBP15.23■□□□□ 0.03
SIN3A-201ENST00000360439 SCRIBQ14160 1630 aa15.22■□□□□ 0.03
SIN3A-201ENST00000360439 RB1CC1Q8TDY2 1594 aa15.18■□□□□ 0.02
SIN3A-201ENST00000360439 APLP2Q06481 763 aa15.14■□□□□ 0.01
SIN3A-201ENST00000360439 ATP1B4Q9UN42 357 aaPredicted RBP15.09■□□□□ 0.01
SIN3A-201ENST00000360439 UBTFP17480 764 aaKnown RBP15.06■□□□□ 0
SIN3A-201ENST00000360439 TRIM26Q12899 539 aaPredicted RBP15.05■□□□□ -0
SIN3A-201ENST00000360439 PPARGC1BQ86YN6 1023 aaKnown RBP15.05■□□□□ -0
SIN3A-201ENST00000360439 NACADO15069 1562 aa15.03■□□□□ -0
SIN3A-201ENST00000360439 DCAF1Q9Y4B6 1507 aa14.99□□□□□ -0.01
SIN3A-201ENST00000360439 SCAF1Q9H7N4 1312 aaKnown RBP14.87□□□□□ -0.03
SIN3A-201ENST00000360439 EIF5BO60841 1220 aaKnown RBP14.86□□□□□ -0.03
SIN3A-201ENST00000360439 FBLN2P98095 1184 aa14.86□□□□□ -0.03
SIN3A-201ENST00000360439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.8□□□□□ -0.04
SIN3A-201ENST00000360439 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
SIN3A-201ENST00000360439 GTF3C3Q9Y5Q9 886 aa14.79□□□□□ -0.04
SIN3A-201ENST00000360439 MYO15BQ96JP2 1530 aa14.77□□□□□ -0.04
SIN3A-201ENST00000360439 LOC105371045A0A1W2PR82 267 aa14.76□□□□□ -0.05
SIN3A-201ENST00000360439 YTHDC1Q96MU7 727 aaKnown RBP14.69□□□□□ -0.06
SIN3A-201ENST00000360439 CCER1Q8TC90 406 aaPredicted RBP14.63□□□□□ -0.07
SIN3A-201ENST00000360439 MYT1LQ9UL68 1186 aa14.62□□□□□ -0.07
SIN3A-201ENST00000360439 BAZ1BQ9UIG0 1483 aaKnown RBP14.56□□□□□ -0.08
SIN3A-201ENST00000360439 CECR2Q9BXF3 1484 aa14.52□□□□□ -0.09
SIN3A-201ENST00000360439 RSF1Q96T23 1441 aaPredicted RBP14.49□□□□□ -0.09
SIN3A-201ENST00000360439 ACIN1Q9UKV3 1341 aaKnown RBP14.49□□□□□ -0.09
SIN3A-201ENST00000360439 ERCC6Q03468 1493 aa14.48□□□□□ -0.09
SIN3A-201ENST00000360439 ANP32EQ9BTT0 268 aa14.45□□□□□ -0.1
SIN3A-201ENST00000360439 BAZ1AQ9NRL2 1556 aaPredicted RBP14.43□□□□□ -0.1
SIN3A-201ENST00000360439 P3H3Q8IVL6 736 aa14.4□□□□□ -0.1
SIN3A-201ENST00000360439 ITGAEP38570 1179 aa14.4□□□□□ -0.1
SIN3A-201ENST00000360439 ARID3CA6NKF2 412 aa14.39□□□□□ -0.11
SIN3A-201ENST00000360439 CHMP7Q8WUX9 453 aaPredicted RBP14.37□□□□□ -0.11
SIN3A-201ENST00000360439 DAXXQ9UER7 740 aaPredicted RBP14.37□□□□□ -0.11
SIN3A-201ENST00000360439 PODXL2Q9NZ53 605 aa14.36□□□□□ -0.11
SIN3A-201ENST00000360439 CSRNP3Q8WYN3 585 aa14.35□□□□□ -0.11
SIN3A-201ENST00000360439 NEUROD1Q13562 356 aa14.29□□□□□ -0.12
SIN3A-201ENST00000360439 GLIPR1L2Q4G1C9 344 aa14.29□□□□□ -0.12
SIN3A-201ENST00000360439 MROH2BQ7Z745 1585 aa14.28□□□□□ -0.12
SIN3A-201ENST00000360439 NPM1P06748 294 aaKnown RBP eCLIP14.26□□□□□ -0.13
SIN3A-201ENST00000360439 CCDC136Q96JN2 1154 aa14.26□□□□□ -0.13
SIN3A-201ENST00000360439 SMARCA2P51531 1590 aa14.25□□□□□ -0.13
SIN3A-201ENST00000360439 DIEXFQ68CQ4 756 aaKnown RBP14.24□□□□□ -0.13
SIN3A-201ENST00000360439 EEA1Q15075 1411 aa14.23□□□□□ -0.13
SIN3A-201ENST00000360439 ANO8Q9HCE9 1232 aaPredicted RBP14.19□□□□□ -0.14
SIN3A-201ENST00000360439 PLEKHG5O94827 1062 aa14.18□□□□□ -0.14
SIN3A-201ENST00000360439 PDS5BQ9NTI5 1447 aa14.18□□□□□ -0.14
SIN3A-201ENST00000360439 FAM50AQ14320 339 aaKnown RBP14.17□□□□□ -0.14
SIN3A-201ENST00000360439 ATAD2BQ9ULI0 1458 aa14.15□□□□□ -0.14
SIN3A-201ENST00000360439 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.15□□□□□ -0.14
SIN3A-201ENST00000360439 RTL5Q5HYW3 569 aaPredicted RBP14.15□□□□□ -0.14
SIN3A-201ENST00000360439 WRNQ14191 1432 aaPredicted RBP eCLIP14.14□□□□□ -0.15
SIN3A-201ENST00000360439 PKNOX2Q96KN3 472 aa14.1□□□□□ -0.15
SIN3A-201ENST00000360439 RTN4Q9NQC3 1192 aaKnown RBP14.1□□□□□ -0.15
SIN3A-201ENST00000360439 DNAJC5BQ9UF47 199 aa14.1□□□□□ -0.15
SIN3A-201ENST00000360439 CDK11AQ9UQ88 783 aaPredicted RBP14.09□□□□□ -0.15
SIN3A-201ENST00000360439 NEFLP07196 543 aa14.09□□□□□ -0.15
SIN3A-201ENST00000360439 ZNF777Q9ULD5 760 aaPredicted RBP14.09□□□□□ -0.15
SIN3A-201ENST00000360439 CCDC88BA6NC98 1476 aa14.09□□□□□ -0.15
SIN3A-201ENST00000360439 CADPSQ9ULU8 1353 aa14.09□□□□□ -0.15
SIN3A-201ENST00000360439 ZNF316A6NFI3 1004 aaPredicted RBP14.09□□□□□ -0.15
SIN3A-201ENST00000360439 TNIKQ9UKE5 1360 aa14.06□□□□□ -0.16
SIN3A-201ENST00000360439 EIF4G1Q04637 1599 aaKnown RBP14.06□□□□□ -0.16
SIN3A-201ENST00000360439 WIZO95785 1651 aa14.06□□□□□ -0.16
SIN3A-201ENST00000360439 GOLGA3Q08378 1498 aa14.05□□□□□ -0.16
SIN3A-201ENST00000360439 A0A0U1RQG5 324 aaPredicted RBP14.05□□□□□ -0.16
SIN3A-201ENST00000360439 SMARCA4P51532 1647 aa14.05□□□□□ -0.16
SIN3A-201ENST00000360439 CEP162Q5TB80 1403 aa14.04□□□□□ -0.16
SIN3A-201ENST00000360439 TOP2AP11388 1531 aaKnown RBP14.02□□□□□ -0.16
SIN3A-201ENST00000360439 BCANQ96GW7 911 aa14.01□□□□□ -0.17
SIN3A-201ENST00000360439 CLSPNQ9HAW4 1339 aa14□□□□□ -0.17
SIN3A-201ENST00000360439 KIF27Q86VH2 1401 aa14□□□□□ -0.17
SIN3A-201ENST00000360439 TRIM52Q96A61 297 aa13.99□□□□□ -0.17
SIN3A-201ENST00000360439 TDRD9Q8NDG6 1382 aaKnown RBP13.98□□□□□ -0.17
SIN3A-201ENST00000360439 KCNH8Q96L42 1107 aa13.98□□□□□ -0.17
SIN3A-201ENST00000360439 PLPPR3Q6T4P5 718 aa13.98□□□□□ -0.17
SIN3A-201ENST00000360439 CEP164Q9UPV0 1460 aa13.95□□□□□ -0.18
SIN3A-201ENST00000360439 TRHP20396 242 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms