RNA–Protein interactions for RNA: ENST00000568190.1

SIN3A-209, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-209ENST00000568190 NISCHQ9Y2I1 1504 aa20.07■□□□□ 0.8
SIN3A-209ENST00000568190 CCDC180Q9P1Z9 1646 aa17.89■□□□□ 0.45
SIN3A-209ENST00000568190 ABCC9O60706 1549 aa17.16■□□□□ 0.34
SIN3A-209ENST00000568190 ZCCHC6Q5VYS8 1495 aaKnown RBP16.77■□□□□ 0.28
SIN3A-209ENST00000568190 MYO15BQ96JP2 1530 aa16.73■□□□□ 0.27
SIN3A-209ENST00000568190 NACADO15069 1562 aa16.72■□□□□ 0.27
SIN3A-209ENST00000568190 DCAF1Q9Y4B6 1507 aa16.7■□□□□ 0.26
SIN3A-209ENST00000568190 RB1CC1Q8TDY2 1594 aa16.68■□□□□ 0.26
SIN3A-209ENST00000568190 DCAF8L2P0C7V8 631 aa16.46■□□□□ 0.23
SIN3A-209ENST00000568190 UNC13AQ9UPW8 1703 aa16.37■□□□□ 0.21
SIN3A-209ENST00000568190 SCRIBQ14160 1630 aa16.19■□□□□ 0.18
SIN3A-209ENST00000568190 BICRAQ9NZM4 1560 aa16.18■□□□□ 0.18
SIN3A-209ENST00000568190 SHROOM4Q9ULL8 1493 aa16.1■□□□□ 0.17
SIN3A-209ENST00000568190 PABPN1Q86U42 306 aaKnown RBP eCLIP15.97■□□□□ 0.15
SIN3A-209ENST00000568190 EIF4G1Q04637 1599 aaKnown RBP15.72■□□□□ 0.11
SIN3A-209ENST00000568190 CC2D2AQ9P2K1 1620 aa15.61■□□□□ 0.09
SIN3A-209ENST00000568190 BAZ1AQ9NRL2 1556 aaPredicted RBP15.57■□□□□ 0.08
SIN3A-209ENST00000568190 SMARCA4P51532 1647 aa15.57■□□□□ 0.08
SIN3A-209ENST00000568190 CECR2Q9BXF3 1484 aa15.55■□□□□ 0.08
SIN3A-209ENST00000568190 DNAJC5BQ9UF47 199 aa15.55■□□□□ 0.08
SIN3A-209ENST00000568190 PEG3Q9GZU2 1588 aa15.47■□□□□ 0.07
SIN3A-209ENST00000568190 SMARCA2P51531 1590 aa15.44■□□□□ 0.06
SIN3A-209ENST00000568190 MROH2BQ7Z745 1585 aa15.44■□□□□ 0.06
SIN3A-209ENST00000568190 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
SIN3A-209ENST00000568190 NCAPD3P42695 1498 aa15.39■□□□□ 0.05
SIN3A-209ENST00000568190 HMGXB3Q12766 1538 aa15.38■□□□□ 0.05
SIN3A-209ENST00000568190 RSF1Q96T23 1441 aaPredicted RBP15.31■□□□□ 0.04
SIN3A-209ENST00000568190 WIZO95785 1651 aa15.29■□□□□ 0.04
SIN3A-209ENST00000568190 BAZ1BQ9UIG0 1483 aaKnown RBP15.27■□□□□ 0.04
SIN3A-209ENST00000568190 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
SIN3A-209ENST00000568190 LAMC3Q9Y6N6 1575 aa15□□□□□ -0.01
SIN3A-209ENST00000568190 CCDC88BA6NC98 1476 aa14.93□□□□□ -0.02
SIN3A-209ENST00000568190 PRDM2Q13029 1718 aa14.92□□□□□ -0.02
SIN3A-209ENST00000568190 CADPSQ9ULU8 1353 aa14.9□□□□□ -0.02
SIN3A-209ENST00000568190 NESP48681 1621 aa14.9□□□□□ -0.02
SIN3A-209ENST00000568190 CFTRP13569 1480 aa14.89□□□□□ -0.03
SIN3A-209ENST00000568190 SUPT5HO00267 1087 aaKnown RBP14.87□□□□□ -0.03
SIN3A-209ENST00000568190 KIF21AQ7Z4S6 1674 aa14.84□□□□□ -0.03
SIN3A-209ENST00000568190 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.04
SIN3A-209ENST00000568190 ERCC6Q03468 1493 aa14.79□□□□□ -0.04
SIN3A-209ENST00000568190 THOC2Q8NI27 1593 aaKnown RBP14.76□□□□□ -0.05
SIN3A-209ENST00000568190 FANCD2Q9BXW9 1451 aa14.74□□□□□ -0.05
SIN3A-209ENST00000568190 CEP164Q9UPV0 1460 aa14.72□□□□□ -0.05
SIN3A-209ENST00000568190 MRC2Q9UBG0 1479 aa14.68□□□□□ -0.06
SIN3A-209ENST00000568190 WDR62O43379 1518 aa14.67□□□□□ -0.06
SIN3A-209ENST00000568190 CUX2O14529 1486 aa14.66□□□□□ -0.06
SIN3A-209ENST00000568190 URB2Q14146 1524 aaKnown RBP14.6□□□□□ -0.07
SIN3A-209ENST00000568190 ABCC8Q09428 1581 aa14.58□□□□□ -0.08
SIN3A-209ENST00000568190 DNMBPQ6XZF7 1577 aa14.57□□□□□ -0.08
SIN3A-209ENST00000568190 TOPBP1Q92547 1522 aa14.54□□□□□ -0.08
SIN3A-209ENST00000568190 CUX1P39880 1505 aa14.49□□□□□ -0.09
SIN3A-209ENST00000568190 BIVM-ERCC5R4GMW8 1640 aa14.47□□□□□ -0.09
SIN3A-209ENST00000568190 TOP2BQ02880 1626 aa14.44□□□□□ -0.1
SIN3A-209ENST00000568190 POLA1P09884 1462 aaPredicted RBP14.43□□□□□ -0.1
SIN3A-209ENST00000568190 WRNQ14191 1432 aaPredicted RBP eCLIP14.42□□□□□ -0.1
SIN3A-209ENST00000568190 TARBP1Q13395 1621 aaKnown RBP14.42□□□□□ -0.1
SIN3A-209ENST00000568190 IFT140Q96RY7 1462 aa14.41□□□□□ -0.1
SIN3A-209ENST00000568190 SYNJ1O43426 1573 aa14.41□□□□□ -0.1
SIN3A-209ENST00000568190 FGD5Q6ZNL6 1462 aa14.39□□□□□ -0.11
SIN3A-209ENST00000568190 WDR97A6NE52 1622 aa14.38□□□□□ -0.11
SIN3A-209ENST00000568190 EIF4G3O43432 1585 aaKnown RBP14.32□□□□□ -0.12
SIN3A-209ENST00000568190 SOGA1O94964 1423 aa14.32□□□□□ -0.12
SIN3A-209ENST00000568190 ABCA10Q8WWZ4 1543 aa14.31□□□□□ -0.12
SIN3A-209ENST00000568190 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
SIN3A-209ENST00000568190 ZNF608Q9ULD9 1512 aaPredicted RBP14.29□□□□□ -0.12
SIN3A-209ENST00000568190 ABCA5Q8WWZ7 1642 aa14.27□□□□□ -0.12
SIN3A-209ENST00000568190 DNAJC5Q9H3Z4 198 aa14.26□□□□□ -0.13
SIN3A-209ENST00000568190 PBRM1Q86U86 1689 aa14.23□□□□□ -0.13
SIN3A-209ENST00000568190 AQRO60306 1485 aaKnown RBP eCLIP14.2□□□□□ -0.14
SIN3A-209ENST00000568190 GAPVD1Q14C86 1478 aa14.19□□□□□ -0.14
SIN3A-209ENST00000568190 TDRD9Q8NDG6 1382 aaKnown RBP14.19□□□□□ -0.14
SIN3A-209ENST00000568190 GRIN2BQ13224 1484 aa14.18□□□□□ -0.14
SIN3A-209ENST00000568190 MAGI1Q96QZ7 1491 aaPredicted RBP14.16□□□□□ -0.14
SIN3A-209ENST00000568190 ERICH3Q5RHP9 1530 aa14.15□□□□□ -0.14
SIN3A-209ENST00000568190 CHD1O14646 1710 aa14.12□□□□□ -0.15
SIN3A-209ENST00000568190 SNAPC4Q5SXM2 1469 aa14.12□□□□□ -0.15
SIN3A-209ENST00000568190 KIF27Q86VH2 1401 aa14.11□□□□□ -0.15
SIN3A-209ENST00000568190 ADAMTS12P58397 1594 aa14.1□□□□□ -0.15
SIN3A-209ENST00000568190 TRIM41Q8WV44 630 aa14.09□□□□□ -0.15
SIN3A-209ENST00000568190 CUL7Q14999 1698 aa14.08□□□□□ -0.16
SIN3A-209ENST00000568190 SYNJ2O15056 1496 aa14.08□□□□□ -0.16
SIN3A-209ENST00000568190 FHAD1B1AJZ9 1412 aa14.04□□□□□ -0.16
SIN3A-209ENST00000568190 CHIC1Q5VXU3 224 aa14.02□□□□□ -0.17
SIN3A-209ENST00000568190 IGF1RP08069 1367 aa14.01□□□□□ -0.17
SIN3A-209ENST00000568190 GRIN2AQ12879 1464 aa14□□□□□ -0.17
SIN3A-209ENST00000568190 EEA1Q15075 1411 aa13.98□□□□□ -0.17
SIN3A-209ENST00000568190 CLASP1Q7Z460 1538 aa13.97□□□□□ -0.17
SIN3A-209ENST00000568190 RUSC2Q8N2Y8 1516 aa13.97□□□□□ -0.17
SIN3A-209ENST00000568190 OSCARQ8IYS5 282 aa13.97□□□□□ -0.17
SIN3A-209ENST00000568190 CHMP7Q8WUX9 453 aaPredicted RBP13.95□□□□□ -0.18
SIN3A-209ENST00000568190 NUP160Q12769 1436 aa13.95□□□□□ -0.18
SIN3A-209ENST00000568190 CEP170Q5SW79 1584 aa13.94□□□□□ -0.18
SIN3A-209ENST00000568190 CARMIL1Q5VZK9 1371 aa13.92□□□□□ -0.18
SIN3A-209ENST00000568190 FBLN2P98095 1184 aa13.91□□□□□ -0.18
SIN3A-209ENST00000568190 PRXQ9BXM0 1461 aa13.91□□□□□ -0.18
SIN3A-209ENST00000568190 RAPGEF2Q9Y4G8 1499 aa13.89□□□□□ -0.19
SIN3A-209ENST00000568190 SHROOM2Q13796 1616 aa13.89□□□□□ -0.19
SIN3A-209ENST00000568190 KIF21BO75037 1637 aa13.86□□□□□ -0.19
SIN3A-209ENST00000568190 CTTNBP2Q8WZ74 1663 aa13.85□□□□□ -0.19
SIN3A-209ENST00000568190 KIAA0586Q9BVV6 1533 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms