RNA–Protein interactions for RNA: ENST00000460706.5

PTBP2-205, Transcript of polypyrimidine tract binding protein 2, humanhuman

TSL 2

Gene PTBP2, Length 1,129 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP2-205ENST00000460706 AEBP2Q6ZN18 517 aaPredicted RBP32.84■■■□□ 2.85
PTBP2-205ENST00000460706 CHIC1Q5VXU3 224 aa31.48■■■□□ 2.63
PTBP2-205ENST00000460706 NISCHQ9Y2I1 1504 aa28.94■■■□□ 2.22
PTBP2-205ENST00000460706 SENP3Q9H4L4 574 aaPredicted RBP27.86■■■□□ 2.05
PTBP2-205ENST00000460706 PHF23Q9BUL5 403 aaPredicted RBP27.68■■■□□ 2.02
PTBP2-205ENST00000460706 ABCC9O60706 1549 aa26.12■■□□□ 1.77
PTBP2-205ENST00000460706 FOXD1Q16676 465 aa25.99■■□□□ 1.75
PTBP2-205ENST00000460706 CCDC180Q9P1Z9 1646 aa25.99■■□□□ 1.75
PTBP2-205ENST00000460706 PLPPR3Q6T4P5 718 aa25.27■■□□□ 1.64
PTBP2-205ENST00000460706 RB1CC1Q8TDY2 1594 aa24.76■■□□□ 1.55
PTBP2-205ENST00000460706 PPP6R1Q9UPN7 881 aa24.62■■□□□ 1.53
PTBP2-205ENST00000460706 DCAF8L2P0C7V8 631 aa24.61■■□□□ 1.53
PTBP2-205ENST00000460706 ADRA2BP18089 450 aa24.56■■□□□ 1.52
PTBP2-205ENST00000460706 NACADO15069 1562 aa24.54■■□□□ 1.52
PTBP2-205ENST00000460706 DNAJC5BQ9UF47 199 aa24.47■■□□□ 1.51
PTBP2-205ENST00000460706 PIAS4Q8N2W9 510 aaPredicted RBP24.36■■□□□ 1.49
PTBP2-205ENST00000460706 PABPN1Q86U42 306 aaKnown RBP eCLIP24.32■■□□□ 1.48
PTBP2-205ENST00000460706 UNC13AQ9UPW8 1703 aa24.29■■□□□ 1.48
PTBP2-205ENST00000460706 MYO15BQ96JP2 1530 aa24.1■■□□□ 1.45
PTBP2-205ENST00000460706 MSH5O43196 834 aa24.1■■□□□ 1.45
PTBP2-205ENST00000460706 BICRAQ9NZM4 1560 aa24.04■■□□□ 1.44
PTBP2-205ENST00000460706 ZCCHC6Q5VYS8 1495 aaKnown RBP23.99■■□□□ 1.43
PTBP2-205ENST00000460706 DCAF1Q9Y4B6 1507 aa23.81■■□□□ 1.4
PTBP2-205ENST00000460706 SCRIBQ14160 1630 aa23.8■■□□□ 1.4
PTBP2-205ENST00000460706 SHROOM4Q9ULL8 1493 aa23.6■■□□□ 1.37
PTBP2-205ENST00000460706 CC2D2AQ9P2K1 1620 aa23.55■■□□□ 1.36
PTBP2-205ENST00000460706 CECR2Q9BXF3 1484 aa23.48■■□□□ 1.35
PTBP2-205ENST00000460706 EIF4G1Q04637 1599 aaKnown RBP23.47■■□□□ 1.35
PTBP2-205ENST00000460706 POTEDQ86YR6 584 aa22.98■■□□□ 1.27
PTBP2-205ENST00000460706 NCAPD3P42695 1498 aa22.63■■□□□ 1.21
PTBP2-205ENST00000460706 SMARCA4P51532 1647 aa22.63■■□□□ 1.21
PTBP2-205ENST00000460706 ATAD2BQ9ULI0 1458 aa22.61■■□□□ 1.21
PTBP2-205ENST00000460706 SMARCA2P51531 1590 aa22.55■■□□□ 1.2
PTBP2-205ENST00000460706 ERCC6Q03468 1493 aa22.54■■□□□ 1.2
PTBP2-205ENST00000460706 HMGXB3Q12766 1538 aa22.5■■□□□ 1.19
PTBP2-205ENST00000460706 BAZ1AQ9NRL2 1556 aaPredicted RBP22.47■■□□□ 1.19
PTBP2-205ENST00000460706 MAPK8IP2Q13387 824 aaPredicted RBP22.47■■□□□ 1.19
PTBP2-205ENST00000460706 BAZ1BQ9UIG0 1483 aaKnown RBP22.44■■□□□ 1.18
PTBP2-205ENST00000460706 NESP48681 1621 aa22.42■■□□□ 1.18
PTBP2-205ENST00000460706 DNAJC5Q9H3Z4 198 aa22.42■■□□□ 1.18
PTBP2-205ENST00000460706 CUX2O14529 1486 aa22.41■■□□□ 1.18
PTBP2-205ENST00000460706 MROH2BQ7Z745 1585 aa22.35■■□□□ 1.17
PTBP2-205ENST00000460706 SCAF1Q9H7N4 1312 aaKnown RBP22.33■■□□□ 1.17
PTBP2-205ENST00000460706 PEG3Q9GZU2 1588 aa22.32■■□□□ 1.16
PTBP2-205ENST00000460706 PPP4R3CPQ6ZMV5 832 aa22.25■■□□□ 1.15
PTBP2-205ENST00000460706 LAMC3Q9Y6N6 1575 aa22.17■■□□□ 1.14
PTBP2-205ENST00000460706 DMRT2Q9Y5R5 561 aa22.17■■□□□ 1.14
PTBP2-205ENST00000460706 THOC2Q8NI27 1593 aaKnown RBP22.16■■□□□ 1.14
PTBP2-205ENST00000460706 KIF21AQ7Z4S6 1674 aa22.16■■□□□ 1.14
PTBP2-205ENST00000460706 WIZO95785 1651 aa22.13■■□□□ 1.13
PTBP2-205ENST00000460706 PDS5BQ9NTI5 1447 aa22.04■■□□□ 1.12
PTBP2-205ENST00000460706 CADPSQ9ULU8 1353 aa21.98■■□□□ 1.11
PTBP2-205ENST00000460706 MRC2Q9UBG0 1479 aa21.9■■□□□ 1.1
PTBP2-205ENST00000460706 RSF1Q96T23 1441 aaPredicted RBP21.84■■□□□ 1.09
PTBP2-205ENST00000460706 WDR62O43379 1518 aa21.82■■□□□ 1.08
PTBP2-205ENST00000460706 CEP164Q9UPV0 1460 aa21.81■■□□□ 1.08
PTBP2-205ENST00000460706 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
PTBP2-205ENST00000460706 TOP2AP11388 1531 aaKnown RBP21.78■■□□□ 1.08
PTBP2-205ENST00000460706 CFTRP13569 1480 aa21.71■■□□□ 1.07
PTBP2-205ENST00000460706 CNKSR2Q8WXI2 1034 aa21.71■■□□□ 1.07
PTBP2-205ENST00000460706 URB2Q14146 1524 aaKnown RBP21.61■■□□□ 1.05
PTBP2-205ENST00000460706 TRIM41Q8WV44 630 aa21.6■■□□□ 1.05
PTBP2-205ENST00000460706 PRDM2Q13029 1718 aa21.58■■□□□ 1.05
PTBP2-205ENST00000460706 CCDC88BA6NC98 1476 aa21.54■■□□□ 1.04
PTBP2-205ENST00000460706 HOXD11P31277 338 aaPredicted RBP21.49■■□□□ 1.03
PTBP2-205ENST00000460706 NCBP3Q53F19 620 aaKnown RBP21.43■■□□□ 1.02
PTBP2-205ENST00000460706 RNF216Q9NWF9 866 aaPredicted RBP21.41■■□□□ 1.02
PTBP2-205ENST00000460706 OSCARQ8IYS5 282 aa21.4■■□□□ 1.02
PTBP2-205ENST00000460706 TOPBP1Q92547 1522 aa21.37■■□□□ 1.01
PTBP2-205ENST00000460706 ZNF608Q9ULD9 1512 aaPredicted RBP21.37■■□□□ 1.01
PTBP2-205ENST00000460706 IFT140Q96RY7 1462 aa21.34■■□□□ 1.01
PTBP2-205ENST00000460706 DNMBPQ6XZF7 1577 aa21.28■■□□□ 1
PTBP2-205ENST00000460706 DCAF8L1A6NGE4 600 aa21.28■■□□□ 1
PTBP2-205ENST00000460706 EIF4G3O43432 1585 aaKnown RBP21.26■□□□□ 0.99
PTBP2-205ENST00000460706 ABCC8Q09428 1581 aa21.23■□□□□ 0.99
PTBP2-205ENST00000460706 NPM3O75607 178 aaKnown RBP21.21■□□□□ 0.99
PTBP2-205ENST00000460706 RIMBP3CA6NJZ7 1639 aa21.19■□□□□ 0.98
PTBP2-205ENST00000460706 RIMBP3BA6NNM3 1639 aa21.19■□□□□ 0.98
PTBP2-205ENST00000460706 RIMBP3Q9UFD9 1639 aa21.19■□□□□ 0.98
PTBP2-205ENST00000460706 AQRO60306 1485 aaKnown RBP eCLIP21.18■□□□□ 0.981e-6■■■■□ 23.7
PTBP2-205ENST00000460706 TARBP1Q13395 1621 aaKnown RBP21.17■□□□□ 0.98
PTBP2-205ENST00000460706 KCNA4P22459 653 aa21.16■□□□□ 0.98
PTBP2-205ENST00000460706 CHD1O14646 1710 aa21.15■□□□□ 0.98
PTBP2-205ENST00000460706 POLA1P09884 1462 aaPredicted RBP21.14■□□□□ 0.98
PTBP2-205ENST00000460706 RAD54L2Q9Y4B4 1467 aa21.12■□□□□ 0.97
PTBP2-205ENST00000460706 FBLN2P98095 1184 aa21.11■□□□□ 0.97
PTBP2-205ENST00000460706 ARHGEF11O15085 1522 aa21.1■□□□□ 0.97
PTBP2-205ENST00000460706 SOGA1O94964 1423 aa21.04■□□□□ 0.96
PTBP2-205ENST00000460706 TDRD9Q8NDG6 1382 aaKnown RBP21.04■□□□□ 0.96
PTBP2-205ENST00000460706 FGD5Q6ZNL6 1462 aa21.03■□□□□ 0.96
PTBP2-205ENST00000460706 CUX1P39880 1505 aa21■□□□□ 0.95
PTBP2-205ENST00000460706 SUPT5HO00267 1087 aaKnown RBP21■□□□□ 0.95
PTBP2-205ENST00000460706 CYB5RLQ6IPT4 315 aa20.97■□□□□ 0.95
PTBP2-205ENST00000460706 SNAPC4Q5SXM2 1469 aa20.96■□□□□ 0.95
PTBP2-205ENST00000460706 ARAP1Q96P48 1450 aa20.89■□□□□ 0.94
PTBP2-205ENST00000460706 WDR97A6NE52 1622 aa20.87■□□□□ 0.93
PTBP2-205ENST00000460706 CHMP7Q8WUX9 453 aaPredicted RBP20.87■□□□□ 0.93
PTBP2-205ENST00000460706 GRIN2BQ13224 1484 aa20.85■□□□□ 0.93
PTBP2-205ENST00000460706 PBRM1Q86U86 1689 aa20.85■□□□□ 0.93
PTBP2-205ENST00000460706 MAGI1Q96QZ7 1491 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms