Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.33□□□□□ -0.111e-9■■■□□ 18.5
SRSF1Q07955 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC7.36□□□□□ -1.231e-9■■■□□ 18.5
SRSF1Q07955 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC7.3□□□□□ -1.241e-9■■■□□ 18.5
SRSF1Q07955 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.241e-9■■■□□ 18.5
SRSF1Q07955 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC6.82□□□□□ -1.321e-9■■■□□ 18.5
SRSF1Q07955 MAP4K4-209ENST00000421882 3416 ntTSL 56.64□□□□□ -1.351e-9■■■□□ 18.5
SRSF1Q07955 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC6.55□□□□□ -1.361e-9■■■□□ 18.5
SRSF1Q07955 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC6.38□□□□□ -1.391e-9■■■□□ 18.5
SRSF1Q07955 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC5.93□□□□□ -1.461e-9■■■□□ 18.5
SRSF1Q07955 MAP4K4-207ENST00000417294 4251 ntTSL 55.21□□□□□ -1.581e-9■■■□□ 18.5
SRSF1Q07955 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.16■□□□□ 0.661e-10■■■□□ 18.5
SRSF1Q07955 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.01■□□□□ 0.631e-10■■■□□ 18.5
SRSF1Q07955 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.3■□□□□ 0.041e-10■■■□□ 18.5
SRSF1Q07955 TPT1-AS1-220ENST00000524062 2285 ntTSL 212.7□□□□□ -0.381e-10■■■□□ 18.5
SRSF1Q07955 TPT1-AS1-204ENST00000434849 2369 ntTSL 211.08□□□□□ -0.641e-10■■■□□ 18.5
SRSF1Q07955 TPT1-AS1-205ENST00000517509 3456 ntTSL 2 BASIC9.29□□□□□ -0.921e-10■■■□□ 18.5
SRSF1Q07955 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC8.39□□□□□ -1.071e-10■■■□□ 18.5
SRSF1Q07955 TPT1-AS1-218ENST00000523445 856 ntTSL 5 BASIC7.98□□□□□ -1.131e-10■■■□□ 18.5
SRSF1Q07955 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.88□□□□□ -1.151e-10■■■□□ 18.5
SRSF1Q07955 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.41□□□□□ -1.221e-10■■■□□ 18.5
SRSF1Q07955 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.34□□□□□ -1.711e-10■■■□□ 18.5
SRSF1Q07955 ZNF330-203ENST00000506302 1180 ntTSL 211.91□□□□□ -0.56e-9■■■□□ 18.5
SRSF1Q07955 ZNF330-201ENST00000262990 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.846e-9■■■□□ 18.5
SRSF1Q07955 SEC31A-231ENST00000510310 584 ntTSL 421.62■■□□□ 1.052e-6■■■□□ 18.5
SRSF1Q07955 SEC31A-223ENST00000507816 546 ntTSL 420.28■□□□□ 0.842e-6■■■□□ 18.5
SRSF1Q07955 GAK-219ENST00000512325 577 ntTSL 320.1■□□□□ 0.819e-6■■■□□ 18.5
SRSF1Q07955 SEC31A-221ENST00000507340 587 ntTSL 419.5■□□□□ 0.712e-6■■■□□ 18.5
SRSF1Q07955 CTTN-206ENST00000482755 1087 ntTSL 219.17■□□□□ 0.669e-6■■■□□ 18.5
SRSF1Q07955 SHCBP1-205ENST00000566016 1482 ntTSL 1 (best)19.14■□□□□ 0.652e-8■■■□□ 18.5
SRSF1Q07955 SHCBP1-203ENST00000564272 530 ntTSL 318.9■□□□□ 0.622e-8■■■□□ 18.5
SRSF1Q07955 TNFAIP2-203ENST00000559195 572 ntTSL 518.58■□□□□ 0.569e-6■■■□□ 18.5
SRSF1Q07955 ASNS-204ENST00000414884 584 ntTSL 218.55■□□□□ 0.563e-6■■■□□ 18.5
SRSF1Q07955 ASNS-211ENST00000451771 562 ntTSL 218.52■□□□□ 0.563e-6■■■□□ 18.5
SRSF1Q07955 CTTN-211ENST00000527622 597 ntTSL 418.19■□□□□ 0.59e-6■■■□□ 18.5
SRSF1Q07955 SEC31A-225ENST00000507867 682 ntTSL 317.92■□□□□ 0.462e-6■■■□□ 18.5
SRSF1Q07955 SEC31A-233ENST00000511975 564 ntTSL 417.92■□□□□ 0.462e-6■■■□□ 18.5
SRSF1Q07955 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.239e-6■■■□□ 18.5
SRSF1Q07955 TNFAIP2-202ENST00000558056 421 ntTSL 515.54■□□□□ 0.089e-6■■■□□ 18.5
SRSF1Q07955 PDE3B-205ENST00000534317 5521 ntTSL 1 (best)15.45■□□□□ 0.069e-6■■■□□ 18.5
SRSF1Q07955 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.039e-6■■■□□ 18.5
SRSF1Q07955 SEC31A-238ENST00000514326 847 ntTSL 314.76□□□□□ -0.052e-6■■■□□ 18.5
SRSF1Q07955 LINC00896-202ENST00000609602 2128 ntBASIC14.62□□□□□ -0.079e-6■■■□□ 18.5
SRSF1Q07955 SEC31A-214ENST00000505434 569 ntTSL 414.55□□□□□ -0.082e-6■■■□□ 18.5
SRSF1Q07955 ZNF160-210ENST00000599637 565 ntTSL 414.46□□□□□ -0.099e-6■■■□□ 18.5
SRSF1Q07955 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.129e-6■■■□□ 18.5
SRSF1Q07955 TNFAIP2-205ENST00000559406 1799 ntTSL 514.24□□□□□ -0.139e-6■■■□□ 18.5
SRSF1Q07955 TNFAIP2-207ENST00000560562 1429 ntTSL 1 (best)13.36□□□□□ -0.279e-6■■■□□ 18.5
SRSF1Q07955 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.539e-6■■■□□ 18.5
SRSF1Q07955 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.552e-8■■■□□ 18.5
SRSF1Q07955 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.589e-6■■■□□ 18.5
SRSF1Q07955 GAK-210ENST00000507991 328 ntTSL 59.8□□□□□ -0.849e-6■■■□□ 18.5
SRSF1Q07955 TGS1-201ENST00000260129 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.939e-6■■■□□ 18.5
SRSF1Q07955 ZNF160-201ENST00000355147 1304 ntTSL 1 (best) BASIC8.77□□□□□ -1.019e-6■■■□□ 18.5
SRSF1Q07955 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.099e-6■■■□□ 18.5
SRSF1Q07955 ZNF160-214ENST00000601421 4688 ntTSL 1 (best) BASIC7.72□□□□□ -1.179e-6■■■□□ 18.5
SRSF1Q07955 TGS1-203ENST00000523948 3159 ntTSL 1 (best)7.36□□□□□ -1.239e-6■■■□□ 18.5
SRSF1Q07955 TTC17-206ENST00000525135 1048 ntTSL 26.67□□□□□ -1.349e-6■■■□□ 18.5
SRSF1Q07955 SEC31A-219ENST00000506497 926 ntTSL 36.25□□□□□ -1.412e-6■■■□□ 18.5
SRSF1Q07955 RBM14-208ENST00000496694 562 ntTSL 56.06□□□□□ -1.449e-6■■■□□ 18.5
SRSF1Q07955 ZNF160-215ENST00000601982 668 ntTSL 35.68□□□□□ -1.59e-6■■■□□ 18.5
SRSF1Q07955 ZNF160-209ENST00000599247 1926 ntTSL 1 (best)5.63□□□□□ -1.519e-6■■■□□ 18.5
SRSF1Q07955 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.519e-6■■■□□ 18.5
SRSF1Q07955 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.569e-6■■■□□ 18.5
SRSF1Q07955 SEC31A-210ENST00000503058 706 ntTSL 55.18□□□□□ -1.582e-6■■■□□ 18.5
SRSF1Q07955 GOLGA4-211ENST00000498250 560 ntTSL 24.9□□□□□ -1.639e-6■■■□□ 18.5
SRSF1Q07955 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.649e-6■■■□□ 18.5
SRSF1Q07955 SLC7A11-202ENST00000509248 797 ntTSL 53.77□□□□□ -1.819e-6■■■□□ 18.5
SRSF1Q07955 SUPT16H-207ENST00000557394 2324 ntTSL 28.86□□□□□ -0.991e-7■■■□□ 18.4
SRSF1Q07955 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.31e-7■■■□□ 18.4
SRSF1Q07955 ZNF692-226ENST00000533647 548 ntTSL 321.19■□□□□ 0.982e-8■■■□□ 18.4
SRSF1Q07955 ZNF692-220ENST00000496411 1064 ntTSL 319.63■□□□□ 0.732e-8■■■□□ 18.4
SRSF1Q07955 ZNF692-219ENST00000496231 656 ntTSL 319.03■□□□□ 0.642e-8■■■□□ 18.4
SRSF1Q07955 ZNF692-214ENST00000483223 901 ntTSL 316.79■□□□□ 0.282e-8■■■□□ 18.4
SRSF1Q07955 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.173e-10■■■□□ 18.4
SRSF1Q07955 INTS10-202ENST00000517546 864 ntTSL 212.28□□□□□ -0.443e-10■■■□□ 18.4
SRSF1Q07955 INTS10-206ENST00000520670 623 ntTSL 510.63□□□□□ -0.713e-10■■■□□ 18.4
SRSF1Q07955 INTS10-209ENST00000521008 572 ntTSL 310.23□□□□□ -0.773e-10■■■□□ 18.4
SRSF1Q07955 INTS10-216ENST00000523772 777 ntTSL 59.49□□□□□ -0.893e-10■■■□□ 18.4
SRSF1Q07955 INTS10-207ENST00000520827 631 ntTSL 37.8□□□□□ -1.163e-10■■■□□ 18.4
SRSF1Q07955 MVD-214ENST00000567064 758 ntTSL 317.18■□□□□ 0.346e-9■■■□□ 18.4
SRSF1Q07955 MVD-208ENST00000563785 888 ntTSL 216.7■□□□□ 0.266e-9■■■□□ 18.4
SRSF1Q07955 MVD-217ENST00000569177 870 ntTSL 516.26■□□□□ 0.196e-9■■■□□ 18.4
SRSF1Q07955 MVD-206ENST00000563170 904 ntTSL 315.21■□□□□ 0.036e-9■■■□□ 18.4
SRSF1Q07955 MVD-215ENST00000568133 853 ntTSL 315.19■□□□□ 0.026e-9■■■□□ 18.4
SRSF1Q07955 CHD2-223ENST00000636306 1755 ntTSL 58.71□□□□□ -1.014e-7■■■□□ 18.4
SRSF1Q07955 TTLL3-231ENST00000496246 507 ntTSL 410.46□□□□□ -0.732e-13■■■□□ 18.4
SRSF1Q07955 TTLL3-226ENST00000474948 603 ntTSL 49.46□□□□□ -0.92e-13■■■□□ 18.4
SRSF1Q07955 SPG7-217ENST00000568151 544 ntTSL 421.35■■□□□ 1.012e-6■■■□□ 18.4
SRSF1Q07955 SPG7-214ENST00000566371 581 ntTSL 320.17■□□□□ 0.822e-6■■■□□ 18.4
SRSF1Q07955 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.24■□□□□ 0.031e-6■■■□□ 18.4
SRSF1Q07955 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.331e-6■■■□□ 18.4
SRSF1Q07955 SFSWAP-204ENST00000535399 778 ntTSL 220.82■□□□□ 0.925e-8■■■□□ 18.4
SRSF1Q07955 SFSWAP-203ENST00000535236 5593 ntTSL 1 (best)15.09■□□□□ 0.015e-8■■■□□ 18.4
SRSF1Q07955 SFSWAP-207ENST00000538548 2636 ntTSL 514.62□□□□□ -0.075e-8■■■□□ 18.4
SRSF1Q07955 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.515e-8■■■□□ 18.4
SRSF1Q07955 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.65e-8■■■□□ 18.4
SRSF1Q07955 SFSWAP-209ENST00000540469 3536 ntTSL 310.04□□□□□ -0.85e-8■■■□□ 18.4
SRSF1Q07955 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.433e-8■■■□□ 18.3
SRSF1Q07955 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.793e-8■■■□□ 18.3
SRSF1Q07955 NUP85-205ENST00000577561 524 ntTSL 318.11■□□□□ 0.492e-9■■■□□ 18.3
Retrieved 100 of 14,836 protein–RNA pairs in 108.3 ms