RNA–Protein interactions for RNA: ENST00000506497.5

SEC31A-219, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 3

Gene SEC31A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-219ENST00000506497 AEBP2Q6ZN18 517 aaPredicted RBP28.27■■■□□ 2.12
SEC31A-219ENST00000506497 CHIC1Q5VXU3 224 aa26.93■■□□□ 1.9
SEC31A-219ENST00000506497 SENP3Q9H4L4 574 aaPredicted RBP24.13■■□□□ 1.45
SEC31A-219ENST00000506497 PHF23Q9BUL5 403 aaPredicted RBP23.84■■□□□ 1.41
SEC31A-219ENST00000506497 FOXD1Q16676 465 aa22.47■■□□□ 1.19
SEC31A-219ENST00000506497 PLPPR3Q6T4P5 718 aa21.59■■□□□ 1.05
SEC31A-219ENST00000506497 PPP6R1Q9UPN7 881 aa21.08■□□□□ 0.97
SEC31A-219ENST00000506497 PIAS4Q8N2W9 510 aaPredicted RBP21.06■□□□□ 0.96
SEC31A-219ENST00000506497 ADRA2BP18089 450 aa21.04■□□□□ 0.96
SEC31A-219ENST00000506497 MSH5O43196 834 aa21.01■□□□□ 0.95
SEC31A-219ENST00000506497 POTEDQ86YR6 584 aa20.62■□□□□ 0.89
SEC31A-219ENST00000506497 MAPK8IP2Q13387 824 aaPredicted RBP19.3■□□□□ 0.68
SEC31A-219ENST00000506497 SCAF1Q9H7N4 1312 aaKnown RBP19.26■□□□□ 0.67
SEC31A-219ENST00000506497 DMRT2Q9Y5R5 561 aa19.13■□□□□ 0.65
SEC31A-219ENST00000506497 PPP4R3CPQ6ZMV5 832 aa18.94■□□□□ 0.62
SEC31A-219ENST00000506497 CNKSR2Q8WXI2 1034 aa18.55■□□□□ 0.56
SEC31A-219ENST00000506497 DCAF8L1A6NGE4 600 aa18.46■□□□□ 0.55
SEC31A-219ENST00000506497 HOXD11P31277 338 aaPredicted RBP18.44■□□□□ 0.54
SEC31A-219ENST00000506497 RNF216Q9NWF9 866 aaPredicted RBP18.35■□□□□ 0.53
SEC31A-219ENST00000506497 NCBP3Q53F19 620 aaKnown RBP18.26■□□□□ 0.51
SEC31A-219ENST00000506497 CACNB1Q02641 598 aaPredicted RBP18.03■□□□□ 0.48
SEC31A-219ENST00000506497 NPM3O75607 178 aaKnown RBP17.96■□□□□ 0.47
SEC31A-219ENST00000506497 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
SEC31A-219ENST00000506497 DNAJC5BQ9UF47 199 aa17.75■□□□□ 0.43
SEC31A-219ENST00000506497 KCNA4P22459 653 aa17.71■□□□□ 0.43
SEC31A-219ENST00000506497 C1QBPQ07021 282 aaKnown RBP17.67■□□□□ 0.42
SEC31A-219ENST00000506497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.66■□□□□ 0.424e-9■■■□□ 16.4
SEC31A-219ENST00000506497 NISCHQ9Y2I1 1504 aa17.49■□□□□ 0.39
SEC31A-219ENST00000506497 U3KPZ7 1027 aaPredicted RBP17.24■□□□□ 0.35
SEC31A-219ENST00000506497 SLC4A2P04920 1241 aa17.11■□□□□ 0.33
SEC31A-219ENST00000506497 CAPN15O75808 1086 aa17■□□□□ 0.31
SEC31A-219ENST00000506497 SPINK5Q9NQ38 1064 aaPredicted RBP16.99■□□□□ 0.31
SEC31A-219ENST00000506497 DSG3P32926 999 aa16.82■□□□□ 0.28
SEC31A-219ENST00000506497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.81■□□□□ 0.28
SEC31A-219ENST00000506497 APLP2Q06481 763 aa16.81■□□□□ 0.28
SEC31A-219ENST00000506497 HNRNPUL2Q1KMD3 747 aaKnown RBP16.81■□□□□ 0.28
SEC31A-219ENST00000506497 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
SEC31A-219ENST00000506497 SLC4A1APQ9BWU0 796 aaKnown RBP16.75■□□□□ 0.27
SEC31A-219ENST00000506497 SAMD1Q6SPF0 538 aaPredicted RBP16.71■□□□□ 0.27
SEC31A-219ENST00000506497 ZNF219Q9P2Y4 722 aaPredicted RBP16.68■□□□□ 0.26
SEC31A-219ENST00000506497 MYCNP04198 464 aaPredicted RBP16.62■□□□□ 0.25
SEC31A-219ENST00000506497 ABCB7O75027 752 aa16.61■□□□□ 0.25
SEC31A-219ENST00000506497 FOXD4L1Q9NU39 408 aa16.49■□□□□ 0.23
SEC31A-219ENST00000506497 POLA2Q14181 598 aa16.3■□□□□ 0.2
SEC31A-219ENST00000506497 ZBTB22O15209 634 aa16.25■□□□□ 0.19
SEC31A-219ENST00000506497 ATF5Q9Y2D1 282 aaPredicted RBP16.22■□□□□ 0.19
SEC31A-219ENST00000506497 RBM42Q9BTD8 480 aaKnown RBP16.07■□□□□ 0.16
SEC31A-219ENST00000506497 POTEHQ6S545 545 aa16.02■□□□□ 0.16
SEC31A-219ENST00000506497 ATXN8OSP0DMR3 200 aa15.95■□□□□ 0.14
SEC31A-219ENST00000506497 ZBTB12Q9Y330 459 aaPredicted RBP15.95■□□□□ 0.14
SEC31A-219ENST00000506497 OSCARQ8IYS5 282 aa15.77■□□□□ 0.12
SEC31A-219ENST00000506497 AKT1S1Q96B36 256 aa15.7■□□□□ 0.1
SEC31A-219ENST00000506497 CHRDL2Q6WN34 429 aa15.68■□□□□ 0.1
SEC31A-219ENST00000506497 FBLN2P98095 1184 aa15.63■□□□□ 0.09
SEC31A-219ENST00000506497 CSRNP3Q8WYN3 585 aa15.59■□□□□ 0.09
SEC31A-219ENST00000506497 REM2Q8IYK8 340 aaPredicted RBP15.56■□□□□ 0.08
SEC31A-219ENST00000506497 EHMT2Q96KQ7 1210 aa15.51■□□□□ 0.07
SEC31A-219ENST00000506497 MKRN4PQ13434 485 aaPredicted RBP15.46■□□□□ 0.07
SEC31A-219ENST00000506497 SPDYE2BA6NHP3 402 aa15.45■□□□□ 0.06
SEC31A-219ENST00000506497 SPDYE6P0CI01 402 aa15.45■□□□□ 0.06
SEC31A-219ENST00000506497 SPDYE2Q495Y8 402 aa15.45■□□□□ 0.06
SEC31A-219ENST00000506497 PITPNM1O00562 1244 aa15.4■□□□□ 0.06
SEC31A-219ENST00000506497 ZNF692Q9BU19 519 aaPredicted RBP15.33■□□□□ 0.04
SEC31A-219ENST00000506497 PIP4P2Q8N4L2 257 aa15.32■□□□□ 0.04
SEC31A-219ENST00000506497 CCDC180Q9P1Z9 1646 aa15.26■□□□□ 0.03
SEC31A-219ENST00000506497 SSUH2Q9Y2M2 353 aa15.23■□□□□ 0.03
SEC31A-219ENST00000506497 FXR2P51116 673 aaKnown RBP eCLIP15.21■□□□□ 0.03
SEC31A-219ENST00000506497 CLEC11AQ9Y240 323 aa15.21■□□□□ 0.03
SEC31A-219ENST00000506497 SPDYE1Q8NFV5 336 aaPredicted RBP15.19■□□□□ 0.02
SEC31A-219ENST00000506497 PABPN1Q86U42 306 aaKnown RBP eCLIP15.1■□□□□ 0.01
SEC31A-219ENST00000506497 HAX1O00165 279 aa15.07■□□□□ 0
SEC31A-219ENST00000506497 PRKAR2AP13861 404 aaKnown RBP15.03■□□□□ -0
SEC31A-219ENST00000506497 SP7Q8TDD2 431 aaPredicted RBP15.02■□□□□ -0
SEC31A-219ENST00000506497 PRR29P0C7W0 189 aa14.95□□□□□ -0.02
SEC31A-219ENST00000506497 CHADLQ6NUI6 762 aa14.88□□□□□ -0.03
SEC31A-219ENST00000506497 EVX2Q03828 476 aa14.84□□□□□ -0.03
SEC31A-219ENST00000506497 SPDYE4A6NLX3 237 aa14.83□□□□□ -0.04
SEC31A-219ENST00000506497 ZCCHC6Q5VYS8 1495 aaKnown RBP14.74□□□□□ -0.05
SEC31A-219ENST00000506497 C19orf67A6NJJ6 358 aa14.73□□□□□ -0.05
SEC31A-219ENST00000506497 STAG3Q9UJ98 1225 aa14.68□□□□□ -0.06
SEC31A-219ENST00000506497 FARP1Q9Y4F1 1045 aaPredicted RBP14.65□□□□□ -0.06
SEC31A-219ENST00000506497 CD44P16070 742 aaKnown RBP14.55□□□□□ -0.08
SEC31A-219ENST00000506497 CREBZFQ9NS37 354 aa14.55□□□□□ -0.08
SEC31A-219ENST00000506497 DCAF1Q9Y4B6 1507 aa14.53□□□□□ -0.08
SEC31A-219ENST00000506497 GABBR2O75899 941 aa14.52□□□□□ -0.09
SEC31A-219ENST00000506497 SLC24A1O60721 1099 aa14.48□□□□□ -0.09
SEC31A-219ENST00000506497 PROM2Q8N271 834 aa14.38□□□□□ -0.11
SEC31A-219ENST00000506497 ZRANB1Q9UGI0 708 aa14.38□□□□□ -0.11
SEC31A-219ENST00000506497 MYO15BQ96JP2 1530 aa14.35□□□□□ -0.11
SEC31A-219ENST00000506497 NPM1P06748 294 aaKnown RBP eCLIP14.33□□□□□ -0.12
SEC31A-219ENST00000506497 DCAF8L2P0C7V8 631 aa14.33□□□□□ -0.12
SEC31A-219ENST00000506497 PAK3O75914 559 aaPredicted RBP14.29□□□□□ -0.12
SEC31A-219ENST00000506497 CLCN6P51797 869 aa14.29□□□□□ -0.12
SEC31A-219ENST00000506497 ZNF579Q8NAF0 562 aaKnown RBP14.29□□□□□ -0.12
SEC31A-219ENST00000506497 MNX1P50219 401 aaPredicted RBP14.27□□□□□ -0.13
SEC31A-219ENST00000506497 ABCC9O60706 1549 aa14.25□□□□□ -0.13
SEC31A-219ENST00000506497 SHROOM4Q9ULL8 1493 aa14.25□□□□□ -0.13
SEC31A-219ENST00000506497 DCBLD2Q96PD2 775 aa14.2□□□□□ -0.14
SEC31A-219ENST00000506497 NACADO15069 1562 aa14.2□□□□□ -0.14
SEC31A-219ENST00000506497 FKBP8Q14318 412 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms