RNA–Protein interactions for RNA: ENST00000429976.5

TRANK1-201, Transcript of tetratricopeptide repeat and ankyrin repeat containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRANK1, Length 10,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1-201ENST00000429976 DCAF8L2P0C7V8 631 aa16.93■□□□□ 0.3
TRANK1-201ENST00000429976 SUPT5HO00267 1087 aaKnown RBP16.25■□□□□ 0.19
TRANK1-201ENST00000429976 EHMT2Q96KQ7 1210 aa16.15■□□□□ 0.18
TRANK1-201ENST00000429976 SHROOM4Q9ULL8 1493 aa15.97■□□□□ 0.15
TRANK1-201ENST00000429976 PELP1Q8IZL8 1130 aaKnown RBP15.93■□□□□ 0.14
TRANK1-201ENST00000429976 TTBK1Q5TCY1 1321 aaPredicted RBP15.64■□□□□ 0.09
TRANK1-201ENST00000429976 ERICH6Q7L0X2 663 aa15.63■□□□□ 0.09
TRANK1-201ENST00000429976 MYT1Q01538 1121 aa15.5■□□□□ 0.07
TRANK1-201ENST00000429976 PCGF6Q9BYE7 350 aa15.48■□□□□ 0.07
TRANK1-201ENST00000429976 APLP2Q06481 763 aa15.44■□□□□ 0.06
TRANK1-201ENST00000429976 FAM9AQ8IZU1 332 aaPredicted RBP15.44■□□□□ 0.06
TRANK1-201ENST00000429976 NISCHQ9Y2I1 1504 aa15.41■□□□□ 0.06
TRANK1-201ENST00000429976 RANGAP1P46060 587 aaPredicted RBP15.28■□□□□ 0.04
TRANK1-201ENST00000429976 CENPBP07199 599 aaPredicted RBP15.24■□□□□ 0.03
TRANK1-201ENST00000429976 YTHDC1Q96MU7 727 aaKnown RBP15.21■□□□□ 0.03
TRANK1-201ENST00000429976 CCER1Q8TC90 406 aaPredicted RBP15.2■□□□□ 0.02
TRANK1-201ENST00000429976 ATP1B4Q9UN42 357 aaPredicted RBP15.01□□□□□ -0.01
TRANK1-201ENST00000429976 ZEB1P37275 1124 aaPredicted RBP14.99□□□□□ -0.01
TRANK1-201ENST00000429976 NEFLP07196 543 aa14.96□□□□□ -0.02
TRANK1-201ENST00000429976 PPARGC1BQ86YN6 1023 aaKnown RBP14.93□□□□□ -0.02
TRANK1-201ENST00000429976 TRIM41Q8WV44 630 aa14.88□□□□□ -0.03
TRANK1-201ENST00000429976 UBTFP17480 764 aaKnown RBP14.81□□□□□ -0.04
TRANK1-201ENST00000429976 DAXXQ9UER7 740 aaPredicted RBP14.73□□□□□ -0.05
TRANK1-201ENST00000429976 POLR3GLQ9BT43 218 aa14.63□□□□□ -0.07
TRANK1-201ENST00000429976 CNGB1Q14028 1251 aaPredicted RBP14.61□□□□□ -0.07
TRANK1-201ENST00000429976 HRCP23327 699 aa14.58□□□□□ -0.08
TRANK1-201ENST00000429976 ITGAEP38570 1179 aa14.57□□□□□ -0.08
TRANK1-201ENST00000429976 TRIM26Q12899 539 aaPredicted RBP14.53□□□□□ -0.08
TRANK1-201ENST00000429976 HNRNPUL2Q1KMD3 747 aaKnown RBP14.42□□□□□ -0.1
TRANK1-201ENST00000429976 LOC105371045A0A1W2PR82 267 aa14.4□□□□□ -0.1
TRANK1-201ENST00000429976 ZNF316A6NFI3 1004 aaPredicted RBP14.37□□□□□ -0.11
TRANK1-201ENST00000429976 CHIC1Q5VXU3 224 aa14.36□□□□□ -0.11
TRANK1-201ENST00000429976 MYT1LQ9UL68 1186 aa14.36□□□□□ -0.11
TRANK1-201ENST00000429976 RTL5Q5HYW3 569 aaPredicted RBP14.34□□□□□ -0.11
TRANK1-201ENST00000429976 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.33□□□□□ -0.12
TRANK1-201ENST00000429976 BCANQ96GW7 911 aa14.31□□□□□ -0.12
TRANK1-201ENST00000429976 SLC4A1APQ9BWU0 796 aaKnown RBP14.28□□□□□ -0.12
TRANK1-201ENST00000429976 DIEXFQ68CQ4 756 aaKnown RBP14.25□□□□□ -0.13
TRANK1-201ENST00000429976 CLSPNQ9HAW4 1339 aa14.25□□□□□ -0.13
TRANK1-201ENST00000429976 GTF3C3Q9Y5Q9 886 aa14.15□□□□□ -0.14
TRANK1-201ENST00000429976 BCL11AQ9H165 835 aa14.13□□□□□ -0.15
TRANK1-201ENST00000429976 NEUROD1Q13562 356 aa14.08□□□□□ -0.16
TRANK1-201ENST00000429976 FAM50AQ14320 339 aaKnown RBP14.07□□□□□ -0.16
TRANK1-201ENST00000429976 EIF5BO60841 1220 aaKnown RBP14.02□□□□□ -0.16
TRANK1-201ENST00000429976 ZNF326Q5BKZ1 582 aaKnown RBP13.99□□□□□ -0.17
TRANK1-201ENST00000429976 TRIM52Q96A61 297 aa13.99□□□□□ -0.17
TRANK1-201ENST00000429976 CDK11AQ9UQ88 783 aaPredicted RBP13.96□□□□□ -0.17
TRANK1-201ENST00000429976 ANP32CO43423 234 aa13.9□□□□□ -0.18
TRANK1-201ENST00000429976 NPM2Q86SE8 214 aaKnown RBP13.88□□□□□ -0.19
TRANK1-201ENST00000429976 CANXP27824 592 aaKnown RBP13.87□□□□□ -0.19
TRANK1-201ENST00000429976 SLC24A1O60721 1099 aa13.85□□□□□ -0.19
TRANK1-201ENST00000429976 ZBTB47Q9UFB7 747 aaPredicted RBP13.82□□□□□ -0.2
TRANK1-201ENST00000429976 ACIN1Q9UKV3 1341 aaKnown RBP13.81□□□□□ -0.2
TRANK1-201ENST00000429976 ANP32AP39687 249 aaKnown RBP13.77□□□□□ -0.21
TRANK1-201ENST00000429976 ARID3CA6NKF2 412 aa13.72□□□□□ -0.21
TRANK1-201ENST00000429976 ARXQ96QS3 562 aa13.69□□□□□ -0.22
TRANK1-201ENST00000429976 FKBP8Q14318 412 aa13.68□□□□□ -0.22
TRANK1-201ENST00000429976 NBR1Q14596 966 aa13.65□□□□□ -0.22
TRANK1-201ENST00000429976 GLIPR1L2Q4G1C9 344 aa13.63□□□□□ -0.23
TRANK1-201ENST00000429976 P3H3Q8IVL6 736 aa13.62□□□□□ -0.23
TRANK1-201ENST00000429976 PABPN1Q86U42 306 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRANK1-201ENST00000429976 ANP32BQ92688 251 aaKnown RBP13.59□□□□□ -0.23
TRANK1-201ENST00000429976 FBLN2P98095 1184 aa13.58□□□□□ -0.24
TRANK1-201ENST00000429976 HSP90AA1P07900 732 aaKnown RBP13.56□□□□□ -0.24
TRANK1-201ENST00000429976 NEFMP07197 916 aa13.54□□□□□ -0.24
TRANK1-201ENST00000429976 SALL2Q9Y467 1007 aaPredicted RBP13.54□□□□□ -0.24
TRANK1-201ENST00000429976 FAM9BQ8IZU0 186 aa13.53□□□□□ -0.24
TRANK1-201ENST00000429976 ZNF777Q9ULD5 760 aaPredicted RBP13.53□□□□□ -0.24
TRANK1-201ENST00000429976 HNRNPUQ00839 825 aaKnown RBP eCLIP13.52□□□□□ -0.25
TRANK1-201ENST00000429976 IRX6P78412 446 aaPredicted RBP13.5□□□□□ -0.25
TRANK1-201ENST00000429976 DDX10Q13206 875 aaKnown RBP13.47□□□□□ -0.25
TRANK1-201ENST00000429976 SCAF1Q9H7N4 1312 aaKnown RBP13.46□□□□□ -0.25
TRANK1-201ENST00000429976 ABCC9O60706 1549 aa13.44□□□□□ -0.26
TRANK1-201ENST00000429976 UPF2Q9HAU5 1272 aaKnown RBP13.42□□□□□ -0.26
TRANK1-201ENST00000429976 TONSLQ96HA7 1378 aa13.42□□□□□ -0.26
TRANK1-201ENST00000429976 CCDC136Q96JN2 1154 aa13.4□□□□□ -0.26
TRANK1-201ENST00000429976 PLPPR3Q6T4P5 718 aa13.4□□□□□ -0.26
TRANK1-201ENST00000429976 AMER1Q5JTC6 1135 aaPredicted RBP13.4□□□□□ -0.26
TRANK1-201ENST00000429976 CHGAP10645 457 aaKnown RBP13.36□□□□□ -0.27
TRANK1-201ENST00000429976 HIRIP3Q9BW71 556 aaPredicted RBP13.35□□□□□ -0.27
TRANK1-201ENST00000429976 CDK11BP21127 795 aaKnown RBP13.33□□□□□ -0.27
TRANK1-201ENST00000429976 SENP3-EIF4A1A0A087X0R7 540 aa13.33□□□□□ -0.28
TRANK1-201ENST00000429976 MIER1Q8N108 512 aa13.32□□□□□ -0.28
TRANK1-201ENST00000429976 TULP1O00294 542 aaPredicted RBP13.31□□□□□ -0.28
TRANK1-201ENST00000429976 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
TRANK1-201ENST00000429976 SENP3Q9H4L4 574 aaPredicted RBP13.3□□□□□ -0.28
TRANK1-201ENST00000429976 CHIC2Q9UKJ5 165 aa13.3□□□□□ -0.28
TRANK1-201ENST00000429976 MRS2Q9HD23 443 aa13.28□□□□□ -0.28
TRANK1-201ENST00000429976 TMC1Q8TDI8 760 aa13.28□□□□□ -0.28
TRANK1-201ENST00000429976 TPRNQ4KMQ1 711 aa13.27□□□□□ -0.29
TRANK1-201ENST00000429976 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRANK1-201ENST00000429976 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.26□□□□□ -0.29
TRANK1-201ENST00000429976 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
TRANK1-201ENST00000429976 KDM2AQ9Y2K7 1162 aa13.25□□□□□ -0.29
TRANK1-201ENST00000429976 WDR43Q15061 677 aaKnown RBP eCLIP13.24□□□□□ -0.29
TRANK1-201ENST00000429976 DCAF1Q9Y4B6 1507 aa13.24□□□□□ -0.29
TRANK1-201ENST00000429976 RTN4Q9NQC3 1192 aaKnown RBP13.23□□□□□ -0.29
TRANK1-201ENST00000429976 SCRIBQ14160 1630 aa13.2□□□□□ -0.3
TRANK1-201ENST00000429976 PLEKHG5O94827 1062 aa13.19□□□□□ -0.3
TRANK1-201ENST00000429976 TNNT2P45379 298 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms