RNA–Protein interactions for RNA: ENST00000474948.5

TTLL3-226, Transcript of tubulin tyrosine ligase like 3, humanhuman

TSL 4

Gene TTLL3, Length 603 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTLL3-226ENST00000474948 NISCHQ9Y2I1 1504 aa23.49■■□□□ 1.35
TTLL3-226ENST00000474948 ABCC9O60706 1549 aa21.4■■□□□ 1.02
TTLL3-226ENST00000474948 CCDC180Q9P1Z9 1646 aa21.15■□□□□ 0.98
TTLL3-226ENST00000474948 DNAJC5BQ9UF47 199 aa20.33■□□□□ 0.85
TTLL3-226ENST00000474948 RB1CC1Q8TDY2 1594 aa20.28■□□□□ 0.84
TTLL3-226ENST00000474948 NACADO15069 1562 aa20.09■□□□□ 0.81
TTLL3-226ENST00000474948 DCAF8L2P0C7V8 631 aa20■□□□□ 0.79
TTLL3-226ENST00000474948 PABPN1Q86U42 306 aaKnown RBP eCLIP19.93■□□□□ 0.78
TTLL3-226ENST00000474948 UNC13AQ9UPW8 1703 aa19.76■□□□□ 0.75
TTLL3-226ENST00000474948 MYO15BQ96JP2 1530 aa19.74■□□□□ 0.75
TTLL3-226ENST00000474948 BICRAQ9NZM4 1560 aa19.66■□□□□ 0.74
TTLL3-226ENST00000474948 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
TTLL3-226ENST00000474948 DCAF1Q9Y4B6 1507 aa19.4■□□□□ 0.7
TTLL3-226ENST00000474948 ZCCHC6Q5VYS8 1495 aaKnown RBP19.39■□□□□ 0.69
TTLL3-226ENST00000474948 CECR2Q9BXF3 1484 aa19.32■□□□□ 0.68
TTLL3-226ENST00000474948 CC2D2AQ9P2K1 1620 aa19.32■□□□□ 0.68
TTLL3-226ENST00000474948 SCRIBQ14160 1630 aa19.24■□□□□ 0.67
TTLL3-226ENST00000474948 EIF4G1Q04637 1599 aaKnown RBP19.22■□□□□ 0.67
TTLL3-226ENST00000474948 DNAJC5Q9H3Z4 198 aa18.88■□□□□ 0.61
TTLL3-226ENST00000474948 CUX2O14529 1486 aa18.57■□□□□ 0.56
TTLL3-226ENST00000474948 NCAPD3P42695 1498 aa18.57■□□□□ 0.56
TTLL3-226ENST00000474948 ERCC6Q03468 1493 aa18.52■□□□□ 0.55
TTLL3-226ENST00000474948 ATAD2BQ9ULI0 1458 aa18.46■□□□□ 0.54
TTLL3-226ENST00000474948 SMARCA2P51531 1590 aa18.39■□□□□ 0.53
TTLL3-226ENST00000474948 HMGXB3Q12766 1538 aa18.37■□□□□ 0.53
TTLL3-226ENST00000474948 SMARCA4P51532 1647 aa18.34■□□□□ 0.53
TTLL3-226ENST00000474948 NESP48681 1621 aa18.31■□□□□ 0.52
TTLL3-226ENST00000474948 BAZ1BQ9UIG0 1483 aaKnown RBP18.26■□□□□ 0.51
TTLL3-226ENST00000474948 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
TTLL3-226ENST00000474948 PEG3Q9GZU2 1588 aa18.18■□□□□ 0.5
TTLL3-226ENST00000474948 LAMC3Q9Y6N6 1575 aa18.17■□□□□ 0.5
TTLL3-226ENST00000474948 THOC2Q8NI27 1593 aaKnown RBP18.14■□□□□ 0.49
TTLL3-226ENST00000474948 PDS5BQ9NTI5 1447 aa18.11■□□□□ 0.49
TTLL3-226ENST00000474948 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.48
TTLL3-226ENST00000474948 KIF21AQ7Z4S6 1674 aa18.04■□□□□ 0.48
TTLL3-226ENST00000474948 CADPSQ9ULU8 1353 aa18■□□□□ 0.47
TTLL3-226ENST00000474948 TRIM41Q8WV44 630 aa17.93■□□□□ 0.46
TTLL3-226ENST00000474948 MRC2Q9UBG0 1479 aa17.92■□□□□ 0.46
TTLL3-226ENST00000474948 WDR62O43379 1518 aa17.87■□□□□ 0.45
TTLL3-226ENST00000474948 WIZO95785 1651 aa17.83■□□□□ 0.45
TTLL3-226ENST00000474948 CEP164Q9UPV0 1460 aa17.81■□□□□ 0.44
TTLL3-226ENST00000474948 FANCD2Q9BXW9 1451 aa17.77■□□□□ 0.44
TTLL3-226ENST00000474948 OSCARQ8IYS5 282 aa17.74■□□□□ 0.43
TTLL3-226ENST00000474948 CFTRP13569 1480 aa17.72■□□□□ 0.43
TTLL3-226ENST00000474948 RSF1Q96T23 1441 aaPredicted RBP17.64■□□□□ 0.42
TTLL3-226ENST00000474948 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
TTLL3-226ENST00000474948 TOP2AP11388 1531 aaKnown RBP17.6■□□□□ 0.41
TTLL3-226ENST00000474948 IFT140Q96RY7 1462 aa17.47■□□□□ 0.39
TTLL3-226ENST00000474948 PRDM2Q13029 1718 aa17.47■□□□□ 0.39
TTLL3-226ENST00000474948 RIMBP3CA6NJZ7 1639 aa17.44■□□□□ 0.38
TTLL3-226ENST00000474948 RIMBP3BA6NNM3 1639 aa17.44■□□□□ 0.38
TTLL3-226ENST00000474948 RIMBP3Q9UFD9 1639 aa17.44■□□□□ 0.38
TTLL3-226ENST00000474948 ZNF608Q9ULD9 1512 aaPredicted RBP17.44■□□□□ 0.38
TTLL3-226ENST00000474948 CCDC88BA6NC98 1476 aa17.44■□□□□ 0.38
TTLL3-226ENST00000474948 TOPBP1Q92547 1522 aa17.4■□□□□ 0.38
TTLL3-226ENST00000474948 ABCC8Q09428 1581 aa17.39■□□□□ 0.37
TTLL3-226ENST00000474948 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
TTLL3-226ENST00000474948 CYB5RLQ6IPT4 315 aa17.33■□□□□ 0.36
TTLL3-226ENST00000474948 EIF4G3O43432 1585 aaKnown RBP17.31■□□□□ 0.36
TTLL3-226ENST00000474948 DNMBPQ6XZF7 1577 aa17.3■□□□□ 0.36
TTLL3-226ENST00000474948 AQRO60306 1485 aaKnown RBP eCLIP17.28■□□□□ 0.361e-16■□□□□ 8.7
TTLL3-226ENST00000474948 FBLN2P98095 1184 aa17.25■□□□□ 0.35
TTLL3-226ENST00000474948 TARBP1Q13395 1621 aaKnown RBP17.25■□□□□ 0.35
TTLL3-226ENST00000474948 CHD1O14646 1710 aa17.22■□□□□ 0.35
TTLL3-226ENST00000474948 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
TTLL3-226ENST00000474948 POLA1P09884 1462 aaPredicted RBP17.2■□□□□ 0.34
TTLL3-226ENST00000474948 ARAP1Q96P48 1450 aa17.18■□□□□ 0.34
TTLL3-226ENST00000474948 SOGA1O94964 1423 aa17.16■□□□□ 0.34
TTLL3-226ENST00000474948 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
TTLL3-226ENST00000474948 RAD54L2Q9Y4B4 1467 aa17.14■□□□□ 0.33
TTLL3-226ENST00000474948 CHMP7Q8WUX9 453 aaPredicted RBP17.1■□□□□ 0.33
TTLL3-226ENST00000474948 WDR97A6NE52 1622 aa17.07■□□□□ 0.32
TTLL3-226ENST00000474948 SNAPC4Q5SXM2 1469 aa17.06■□□□□ 0.32
TTLL3-226ENST00000474948 FGD5Q6ZNL6 1462 aa17.05■□□□□ 0.32
TTLL3-226ENST00000474948 MAGI1Q96QZ7 1491 aaPredicted RBP17.04■□□□□ 0.32
TTLL3-226ENST00000474948 CLASP1Q7Z460 1538 aa17.03■□□□□ 0.32
TTLL3-226ENST00000474948 SYNJ1O43426 1573 aa17.02■□□□□ 0.32
TTLL3-226ENST00000474948 GRIN2BQ13224 1484 aa17.02■□□□□ 0.32
TTLL3-226ENST00000474948 CUX1P39880 1505 aa17■□□□□ 0.31
TTLL3-226ENST00000474948 SYNJ2O15056 1496 aa16.99■□□□□ 0.31
TTLL3-226ENST00000474948 GAPVD1Q14C86 1478 aa16.93■□□□□ 0.3
TTLL3-226ENST00000474948 AEBP2Q6ZN18 517 aaPredicted RBP16.91■□□□□ 0.3
TTLL3-226ENST00000474948 PBRM1Q86U86 1689 aa16.88■□□□□ 0.29
TTLL3-226ENST00000474948 ABCA10Q8WWZ4 1543 aa16.86■□□□□ 0.29
TTLL3-226ENST00000474948 ABCA5Q8WWZ7 1642 aa16.82■□□□□ 0.28
TTLL3-226ENST00000474948 GRIN2AQ12879 1464 aa16.79■□□□□ 0.28
TTLL3-226ENST00000474948 WRNQ14191 1432 aaPredicted RBP eCLIP16.78■□□□□ 0.28
TTLL3-226ENST00000474948 ERCC6L2Q5T890 1561 aa16.74■□□□□ 0.27
TTLL3-226ENST00000474948 NUP160Q12769 1436 aa16.74■□□□□ 0.27
TTLL3-226ENST00000474948 CEP170Q5SW79 1584 aa16.72■□□□□ 0.27
TTLL3-226ENST00000474948 SUPT5HO00267 1087 aaKnown RBP16.71■□□□□ 0.27
TTLL3-226ENST00000474948 FHAD1B1AJZ9 1412 aa16.7■□□□□ 0.26
TTLL3-226ENST00000474948 ADAMTS12P58397 1594 aa16.7■□□□□ 0.26
TTLL3-226ENST00000474948 TOP2BQ02880 1626 aa16.67■□□□□ 0.26
TTLL3-226ENST00000474948 SHROOM2Q13796 1616 aa16.67■□□□□ 0.26
TTLL3-226ENST00000474948 BIVM-ERCC5R4GMW8 1640 aa16.65■□□□□ 0.26
TTLL3-226ENST00000474948 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
TTLL3-226ENST00000474948 JPH4Q96JJ6 628 aa16.63■□□□□ 0.25
TTLL3-226ENST00000474948 PRG4Q92954 1404 aaPredicted RBP16.62■□□□□ 0.25
TTLL3-226ENST00000474948 NPM1P06748 294 aaKnown RBP eCLIP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms