RNA–Protein interactions for RNA: ENST00000559406.5

TNFAIP2-205, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 1,799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-205ENST00000559406 NISCHQ9Y2I1 1504 aa38.49■■■■□ 3.75
TNFAIP2-205ENST00000559406 CCDC180Q9P1Z9 1646 aa33.88■■■■□ 3.01
TNFAIP2-205ENST00000559406 ABCC9O60706 1549 aa32.57■■■□□ 2.8
TNFAIP2-205ENST00000559406 ZCCHC6Q5VYS8 1495 aaKnown RBP32.22■■■□□ 2.75
TNFAIP2-205ENST00000559406 DCAF8L2P0C7V8 631 aa31.86■■■□□ 2.69
TNFAIP2-205ENST00000559406 DCAF1Q9Y4B6 1507 aa31.81■■■□□ 2.68
TNFAIP2-205ENST00000559406 MYO15BQ96JP2 1530 aa31.66■■■□□ 2.66
TNFAIP2-205ENST00000559406 NACADO15069 1562 aa31.66■■■□□ 2.66
TNFAIP2-205ENST00000559406 RB1CC1Q8TDY2 1594 aa31.53■■■□□ 2.64
TNFAIP2-205ENST00000559406 SCRIBQ14160 1630 aa31.07■■■□□ 2.56
TNFAIP2-205ENST00000559406 UNC13AQ9UPW8 1703 aa31.03■■■□□ 2.56
TNFAIP2-205ENST00000559406 SHROOM4Q9ULL8 1493 aa30.92■■■□□ 2.54
TNFAIP2-205ENST00000559406 BICRAQ9NZM4 1560 aa30.69■■■□□ 2.5
TNFAIP2-205ENST00000559406 PABPN1Q86U42 306 aaKnown RBP eCLIP30.56■■■□□ 2.48
TNFAIP2-205ENST00000559406 CECR2Q9BXF3 1484 aa29.99■■■□□ 2.39
TNFAIP2-205ENST00000559406 EIF4G1Q04637 1599 aaKnown RBP29.76■■■□□ 2.35
TNFAIP2-205ENST00000559406 SMARCA4P51532 1647 aa29.75■■■□□ 2.35
TNFAIP2-205ENST00000559406 BAZ1AQ9NRL2 1556 aaPredicted RBP29.74■■■□□ 2.35
TNFAIP2-205ENST00000559406 MROH2BQ7Z745 1585 aa29.74■■■□□ 2.35
TNFAIP2-205ENST00000559406 RSF1Q96T23 1441 aaPredicted RBP29.6■■■□□ 2.33
TNFAIP2-205ENST00000559406 CC2D2AQ9P2K1 1620 aa29.49■■■□□ 2.31
TNFAIP2-205ENST00000559406 WIZO95785 1651 aa29.49■■■□□ 2.31
TNFAIP2-205ENST00000559406 PEG3Q9GZU2 1588 aa29.41■■■□□ 2.3
TNFAIP2-205ENST00000559406 ATAD2BQ9ULI0 1458 aa29.38■■■□□ 2.29
TNFAIP2-205ENST00000559406 SUPT5HO00267 1087 aaKnown RBP29.38■■■□□ 2.29
TNFAIP2-205ENST00000559406 DNAJC5BQ9UF47 199 aa29.34■■■□□ 2.29
TNFAIP2-205ENST00000559406 SMARCA2P51531 1590 aa29.32■■■□□ 2.28
TNFAIP2-205ENST00000559406 NCAPD3P42695 1498 aa29.22■■■□□ 2.27
TNFAIP2-205ENST00000559406 BAZ1BQ9UIG0 1483 aaKnown RBP29.15■■■□□ 2.26
TNFAIP2-205ENST00000559406 HMGXB3Q12766 1538 aa29.14■■■□□ 2.26
TNFAIP2-205ENST00000559406 TOP2AP11388 1531 aaKnown RBP29.11■■■□□ 2.25
TNFAIP2-205ENST00000559406 CCDC88BA6NC98 1476 aa28.8■■■□□ 2.2
TNFAIP2-205ENST00000559406 NESP48681 1621 aa28.44■■■□□ 2.14
TNFAIP2-205ENST00000559406 CADPSQ9ULU8 1353 aa28.4■■■□□ 2.14
TNFAIP2-205ENST00000559406 CFTRP13569 1480 aa28.4■■■□□ 2.14
TNFAIP2-205ENST00000559406 LAMC3Q9Y6N6 1575 aa28.34■■■□□ 2.13
TNFAIP2-205ENST00000559406 PRDM2Q13029 1718 aa28.3■■■□□ 2.12
TNFAIP2-205ENST00000559406 KIF21AQ7Z4S6 1674 aa28.13■■■□□ 2.09
TNFAIP2-205ENST00000559406 FANCD2Q9BXW9 1451 aa28.11■■■□□ 2.09
TNFAIP2-205ENST00000559406 PDS5BQ9NTI5 1447 aa28.07■■■□□ 2.08
TNFAIP2-205ENST00000559406 ABCC8Q09428 1581 aa28.03■■■□□ 2.08
TNFAIP2-205ENST00000559406 CEP164Q9UPV0 1460 aa27.98■■■□□ 2.07
TNFAIP2-205ENST00000559406 ERCC6Q03468 1493 aa27.92■■■□□ 2.06
TNFAIP2-205ENST00000559406 WRNQ14191 1432 aaPredicted RBP eCLIP27.85■■■□□ 2.05
TNFAIP2-205ENST00000559406 CUX1P39880 1505 aa27.85■■■□□ 2.05
TNFAIP2-205ENST00000559406 SYNJ1O43426 1573 aa27.84■■■□□ 2.05
TNFAIP2-205ENST00000559406 URB2Q14146 1524 aaKnown RBP27.84■■■□□ 2.05
TNFAIP2-205ENST00000559406 CHIC1Q5VXU3 224 aa27.83■■■□□ 2.05
TNFAIP2-205ENST00000559406 THOC2Q8NI27 1593 aaKnown RBP27.82■■■□□ 2.04
TNFAIP2-205ENST00000559406 MRC2Q9UBG0 1479 aa27.8■■■□□ 2.04
TNFAIP2-205ENST00000559406 DNMBPQ6XZF7 1577 aa27.76■■■□□ 2.03
TNFAIP2-205ENST00000559406 TOPBP1Q92547 1522 aa27.76■■■□□ 2.03
TNFAIP2-205ENST00000559406 BIVM-ERCC5R4GMW8 1640 aa27.76■■■□□ 2.03
TNFAIP2-205ENST00000559406 TOP2BQ02880 1626 aa27.75■■■□□ 2.03
TNFAIP2-205ENST00000559406 WDR62O43379 1518 aa27.72■■■□□ 2.03
TNFAIP2-205ENST00000559406 TRIM41Q8WV44 630 aa27.63■■■□□ 2.01
TNFAIP2-205ENST00000559406 FGD5Q6ZNL6 1462 aa27.61■■■□□ 2.01
TNFAIP2-205ENST00000559406 POLA1P09884 1462 aaPredicted RBP27.57■■■□□ 2
TNFAIP2-205ENST00000559406 CUX2O14529 1486 aa27.51■■□□□ 1.99
TNFAIP2-205ENST00000559406 RAD54L2Q9Y4B4 1467 aa27.49■■□□□ 1.99
TNFAIP2-205ENST00000559406 TARBP1Q13395 1621 aaKnown RBP27.44■■□□□ 1.98
TNFAIP2-205ENST00000559406 SOGA1O94964 1423 aa27.43■■□□□ 1.98
TNFAIP2-205ENST00000559406 WDR97A6NE52 1622 aa27.4■■□□□ 1.98
TNFAIP2-205ENST00000559406 IFT140Q96RY7 1462 aa27.35■■□□□ 1.97
TNFAIP2-205ENST00000559406 ABCA10Q8WWZ4 1543 aa27.34■■□□□ 1.97
TNFAIP2-205ENST00000559406 RUSC2Q8N2Y8 1516 aa27.32■■□□□ 1.96
TNFAIP2-205ENST00000559406 ZNF608Q9ULD9 1512 aaPredicted RBP27.28■■□□□ 1.96
TNFAIP2-205ENST00000559406 TDRD9Q8NDG6 1382 aaKnown RBP27.24■■□□□ 1.95
TNFAIP2-205ENST00000559406 ABCA5Q8WWZ7 1642 aa27.23■■□□□ 1.95
TNFAIP2-205ENST00000559406 AQRO60306 1485 aaKnown RBP eCLIP27.19■■□□□ 1.948e-7■■■■■ 42.7
TNFAIP2-205ENST00000559406 EIF4G3O43432 1585 aaKnown RBP27.18■■□□□ 1.94
TNFAIP2-205ENST00000559406 KIF27Q86VH2 1401 aa27.17■■□□□ 1.94
TNFAIP2-205ENST00000559406 FAM9AQ8IZU1 332 aaPredicted RBP27.15■■□□□ 1.94
TNFAIP2-205ENST00000559406 GAPVD1Q14C86 1478 aa27.13■■□□□ 1.93
TNFAIP2-205ENST00000559406 PBRM1Q86U86 1689 aa27.11■■□□□ 1.93
TNFAIP2-205ENST00000559406 EEA1Q15075 1411 aa27.06■■□□□ 1.92
TNFAIP2-205ENST00000559406 IGF1RP08069 1367 aa27.04■■□□□ 1.92
TNFAIP2-205ENST00000559406 GRIN2BQ13224 1484 aa27.01■■□□□ 1.91
TNFAIP2-205ENST00000559406 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
TNFAIP2-205ENST00000559406 CSRNP3Q8WYN3 585 aa26.99■■□□□ 1.91
TNFAIP2-205ENST00000559406 SNAPC4Q5SXM2 1469 aa26.94■■□□□ 1.9
TNFAIP2-205ENST00000559406 CUL7Q14999 1698 aa26.9■■□□□ 1.9
TNFAIP2-205ENST00000559406 ADAMTS12P58397 1594 aa26.9■■□□□ 1.9
TNFAIP2-205ENST00000559406 PRXQ9BXM0 1461 aa26.89■■□□□ 1.89
TNFAIP2-205ENST00000559406 CARMIL1Q5VZK9 1371 aa26.86■■□□□ 1.89
TNFAIP2-205ENST00000559406 MAGI1Q96QZ7 1491 aaPredicted RBP26.85■■□□□ 1.89
TNFAIP2-205ENST00000559406 KIF21BO75037 1637 aa26.84■■□□□ 1.89
TNFAIP2-205ENST00000559406 FHAD1B1AJZ9 1412 aa26.81■■□□□ 1.88
TNFAIP2-205ENST00000559406 RAPGEF2Q9Y4G8 1499 aa26.81■■□□□ 1.88
TNFAIP2-205ENST00000559406 EHMT2Q96KQ7 1210 aa26.8■■□□□ 1.88
TNFAIP2-205ENST00000559406 SYNJ2O15056 1496 aa26.76■■□□□ 1.87
TNFAIP2-205ENST00000559406 LOC105371045A0A1W2PR82 267 aa26.75■■□□□ 1.87
TNFAIP2-205ENST00000559406 CHD1O14646 1710 aa26.75■■□□□ 1.87
TNFAIP2-205ENST00000559406 GOLGA3Q08378 1498 aa26.7■■□□□ 1.86
TNFAIP2-205ENST00000559406 GRIN2AQ12879 1464 aa26.7■■□□□ 1.86
TNFAIP2-205ENST00000559406 FBLN2P98095 1184 aa26.66■■□□□ 1.86
TNFAIP2-205ENST00000559406 CHMP7Q8WUX9 453 aaPredicted RBP26.66■■□□□ 1.86
TNFAIP2-205ENST00000559406 CEP170Q5SW79 1584 aa26.6■■□□□ 1.85
TNFAIP2-205ENST00000559406 CTTNBP2Q8WZ74 1663 aa26.56■■□□□ 1.84
TNFAIP2-205ENST00000559406 UBTFP17480 764 aaKnown RBP26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms