Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 MIR4767-201ENST00000582827 78 ntBASIC22.55■■□□□ 1.2
RARAP10276 AL136162.1-201ENST00000607711 1078 ntBASIC22.55■■□□□ 1.2
RARAP10276 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
RARAP10276 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RARAP10276 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RARAP10276 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RARAP10276 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.55■■□□□ 1.2
RARAP10276 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RARAP10276 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RARAP10276 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.54■■□□□ 1.2
RARAP10276 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
RARAP10276 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RARAP10276 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
RARAP10276 AC244015.2-201ENST00000616358 1861 ntBASIC22.54■■□□□ 1.2
RARAP10276 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RARAP10276 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RARAP10276 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RARAP10276 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RARAP10276 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
RARAP10276 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RARAP10276 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RARAP10276 AC087239.1-201ENST00000622671 572 ntBASIC22.53■■□□□ 1.2
RARAP10276 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.53■■□□□ 1.2
RARAP10276 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.52■■□□□ 1.2
RARAP10276 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RARAP10276 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RARAP10276 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.52■■□□□ 1.2
RARAP10276 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.52■■□□□ 1.2
RARAP10276 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
RARAP10276 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RARAP10276 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RARAP10276 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.52■■□□□ 1.2
RARAP10276 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RARAP10276 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RARAP10276 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.52■■□□□ 1.2
RARAP10276 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RARAP10276 AC005229.4-201ENST00000610085 2198 ntBASIC22.52■■□□□ 1.2
RARAP10276 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RARAP10276 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.51■■□□□ 1.19
RARAP10276 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RARAP10276 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
RARAP10276 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RARAP10276 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.51■■□□□ 1.19
RARAP10276 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
RARAP10276 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.51■■□□□ 1.19
RARAP10276 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.51■■□□□ 1.19
RARAP10276 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RARAP10276 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.51■■□□□ 1.19
RARAP10276 AC096631.2-201ENST00000436136 790 ntBASIC22.51■■□□□ 1.19
RARAP10276 AP005435.1-201ENST00000529293 1178 ntBASIC22.51■■□□□ 1.19
RARAP10276 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.51■■□□□ 1.19
RARAP10276 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.51■■□□□ 1.19
RARAP10276 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.51■■□□□ 1.19
RARAP10276 AC135279.3-201ENST00000610945 1311 ntBASIC22.51■■□□□ 1.19
RARAP10276 OXCT2P1-201ENST00000447263 1535 ntBASIC22.51■■□□□ 1.19
RARAP10276 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RARAP10276 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
RARAP10276 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.5■■□□□ 1.19
RARAP10276 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RARAP10276 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
RARAP10276 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RARAP10276 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RARAP10276 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RARAP10276 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.5■■□□□ 1.19
RARAP10276 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.5■■□□□ 1.19
RARAP10276 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RARAP10276 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RARAP10276 OR7E47P-201ENST00000546390 1422 ntBASIC22.49■■□□□ 1.19
RARAP10276 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.49■■□□□ 1.19
RARAP10276 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RARAP10276 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
RARAP10276 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.49■■□□□ 1.19
RARAP10276 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RARAP10276 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
RARAP10276 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.49■■□□□ 1.19
RARAP10276 BX842568.3-201ENST00000418104 571 ntBASIC22.49■■□□□ 1.19
RARAP10276 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.49■■□□□ 1.19
RARAP10276 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.49■■□□□ 1.19
RARAP10276 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RARAP10276 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RARAP10276 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.49■■□□□ 1.19
RARAP10276 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RARAP10276 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RARAP10276 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RARAP10276 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
RARAP10276 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.48■■□□□ 1.19
RARAP10276 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.48■■□□□ 1.19
RARAP10276 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.48■■□□□ 1.19
RARAP10276 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RARAP10276 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RARAP10276 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RARAP10276 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RARAP10276 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RARAP10276 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RARAP10276 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RARAP10276 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.47■■□□□ 1.19
RARAP10276 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RARAP10276 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.47■■□□□ 1.19
RARAP10276 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.47■■□□□ 1.19
RARAP10276 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms