RNA–Protein interactions for RNA: ENST00000543610.5

CCDC189-206, Transcript of coiled-coil domain containing 189, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC189, Length 1,967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-206ENST00000543610 NISCHQ9Y2I1 1504 aa46.09■■■■■ 4.97
CCDC189-206ENST00000543610 CCDC180Q9P1Z9 1646 aa39.76■■■■□ 3.95
CCDC189-206ENST00000543610 ZCCHC6Q5VYS8 1495 aaKnown RBP38.89■■■■□ 3.82
CCDC189-206ENST00000543610 SHROOM4Q9ULL8 1493 aa38.4■■■■□ 3.74
CCDC189-206ENST00000543610 DCAF8L2P0C7V8 631 aa38■■■■□ 3.67
CCDC189-206ENST00000543610 DCAF1Q9Y4B6 1507 aa37.99■■■■□ 3.67
CCDC189-206ENST00000543610 ABCC9O60706 1549 aa37.3■■■■□ 3.56
CCDC189-206ENST00000543610 SUPT5HO00267 1087 aaKnown RBP37.28■■■■□ 3.56
CCDC189-206ENST00000543610 MYO15BQ96JP2 1530 aa37.2■■■■□ 3.55
CCDC189-206ENST00000543610 SCRIBQ14160 1630 aa36.87■■■■□ 3.49
CCDC189-206ENST00000543610 NACADO15069 1562 aa36.83■■■■□ 3.49
CCDC189-206ENST00000543610 RB1CC1Q8TDY2 1594 aa36.37■■■■□ 3.41
CCDC189-206ENST00000543610 RSF1Q96T23 1441 aaPredicted RBP36.1■■■■□ 3.37
CCDC189-206ENST00000543610 CHIC1Q5VXU3 224 aa36.02■■■■□ 3.36
CCDC189-206ENST00000543610 CECR2Q9BXF3 1484 aa35.87■■■■□ 3.33
CCDC189-206ENST00000543610 UNC13AQ9UPW8 1703 aa35.84■■■■□ 3.33
CCDC189-206ENST00000543610 MROH2BQ7Z745 1585 aa35.73■■■■□ 3.31
CCDC189-206ENST00000543610 WIZO95785 1651 aa35.52■■■■□ 3.28
CCDC189-206ENST00000543610 BAZ1AQ9NRL2 1556 aaPredicted RBP35.51■■■■□ 3.28
CCDC189-206ENST00000543610 BICRAQ9NZM4 1560 aa35.35■■■■□ 3.25
CCDC189-206ENST00000543610 SMARCA4P51532 1647 aa35.3■■■■□ 3.24
CCDC189-206ENST00000543610 PABPN1Q86U42 306 aaKnown RBP eCLIP35.18■■■■□ 3.22
CCDC189-206ENST00000543610 TOP2AP11388 1531 aaKnown RBP35.05■■■■□ 3.2
CCDC189-206ENST00000543610 TRIM41Q8WV44 630 aa34.89■■■■□ 3.18
CCDC189-206ENST00000543610 EIF4G1Q04637 1599 aaKnown RBP34.84■■■■□ 3.17
CCDC189-206ENST00000543610 SMARCA2P51531 1590 aa34.8■■■■□ 3.16
CCDC189-206ENST00000543610 LOC105371045A0A1W2PR82 267 aa34.78■■■■□ 3.16
CCDC189-206ENST00000543610 CCDC88BA6NC98 1476 aa34.76■■■■□ 3.16
CCDC189-206ENST00000543610 PEG3Q9GZU2 1588 aa34.75■■■■□ 3.15
CCDC189-206ENST00000543610 ATAD2BQ9ULI0 1458 aa34.5■■■■□ 3.11
CCDC189-206ENST00000543610 FAM9AQ8IZU1 332 aaPredicted RBP34.43■■■■□ 3.1
CCDC189-206ENST00000543610 ABCC8Q09428 1581 aa34.39■■■■□ 3.1
CCDC189-206ENST00000543610 BAZ1BQ9UIG0 1483 aaKnown RBP34.37■■■■□ 3.09
CCDC189-206ENST00000543610 HMGXB3Q12766 1538 aa34.04■■■■□ 3.04
CCDC189-206ENST00000543610 EHMT2Q96KQ7 1210 aa34.03■■■■□ 3.04
CCDC189-206ENST00000543610 PCGF6Q9BYE7 350 aa34.01■■■■□ 3.03
CCDC189-206ENST00000543610 NCAPD3P42695 1498 aa34.01■■■■□ 3.03
CCDC189-206ENST00000543610 WRNQ14191 1432 aaPredicted RBP eCLIP33.95■■■■□ 3.02
CCDC189-206ENST00000543610 SOGA1O94964 1423 aa33.87■■■■□ 3.01
CCDC189-206ENST00000543610 SYNJ1O43426 1573 aa33.85■■■■□ 3.01
CCDC189-206ENST00000543610 EEA1Q15075 1411 aa33.77■■■■□ 3
CCDC189-206ENST00000543610 CC2D2AQ9P2K1 1620 aa33.73■■■□□ 2.99
CCDC189-206ENST00000543610 RUSC2Q8N2Y8 1516 aa33.73■■■□□ 2.99
CCDC189-206ENST00000543610 TRIM26Q12899 539 aaPredicted RBP33.68■■■□□ 2.98
CCDC189-206ENST00000543610 CSRNP3Q8WYN3 585 aa33.6■■■□□ 2.97
CCDC189-206ENST00000543610 HRCP23327 699 aa33.6■■■□□ 2.97
CCDC189-206ENST00000543610 TOP2BQ02880 1626 aa33.57■■■□□ 2.96
CCDC189-206ENST00000543610 BIVM-ERCC5R4GMW8 1640 aa33.52■■■□□ 2.96
CCDC189-206ENST00000543610 CFTRP13569 1480 aa33.51■■■□□ 2.95
CCDC189-206ENST00000543610 TNIKQ9UKE5 1360 aa33.45■■■□□ 2.95
CCDC189-206ENST00000543610 GOLGA3Q08378 1498 aa33.43■■■□□ 2.94
CCDC189-206ENST00000543610 PRDM2Q13029 1718 aa33.42■■■□□ 2.94
CCDC189-206ENST00000543610 CEP162Q5TB80 1403 aa33.41■■■□□ 2.94
CCDC189-206ENST00000543610 DNAJC5BQ9UF47 199 aa33.4■■■□□ 2.94
CCDC189-206ENST00000543610 KIF21BO75037 1637 aa33.37■■■□□ 2.93
CCDC189-206ENST00000543610 CUX1P39880 1505 aa33.34■■■□□ 2.93
CCDC189-206ENST00000543610 CEP164Q9UPV0 1460 aa33.34■■■□□ 2.93
CCDC189-206ENST00000543610 UBTFP17480 764 aaKnown RBP33.31■■■□□ 2.92
CCDC189-206ENST00000543610 CADPSQ9ULU8 1353 aa33.23■■■□□ 2.91
CCDC189-206ENST00000543610 PPARGC1BQ86YN6 1023 aaKnown RBP33.16■■■□□ 2.9
CCDC189-206ENST00000543610 RAPGEF2Q9Y4G8 1499 aa33.13■■■□□ 2.89
CCDC189-206ENST00000543610 KIF27Q86VH2 1401 aa32.98■■■□□ 2.87
CCDC189-206ENST00000543610 PRXQ9BXM0 1461 aa32.97■■■□□ 2.87
CCDC189-206ENST00000543610 ERICH3Q5RHP9 1530 aa32.97■■■□□ 2.87
CCDC189-206ENST00000543610 CLIP1P30622 1438 aa32.95■■■□□ 2.87
CCDC189-206ENST00000543610 FANCD2Q9BXW9 1451 aa32.92■■■□□ 2.86
CCDC189-206ENST00000543610 FGD5Q6ZNL6 1462 aa32.85■■■□□ 2.85
CCDC189-206ENST00000543610 NESP48681 1621 aa32.84■■■□□ 2.85
CCDC189-206ENST00000543610 CUX2O14529 1486 aa32.78■■■□□ 2.84
CCDC189-206ENST00000543610 TTBK1Q5TCY1 1321 aaPredicted RBP32.77■■■□□ 2.84
CCDC189-206ENST00000543610 VPS8Q8N3P4 1428 aa32.76■■■□□ 2.83
CCDC189-206ENST00000543610 LAMC3Q9Y6N6 1575 aa32.74■■■□□ 2.83
CCDC189-206ENST00000543610 DNMBPQ6XZF7 1577 aa32.73■■■□□ 2.83
CCDC189-206ENST00000543610 RANGAP1P46060 587 aaPredicted RBP32.69■■■□□ 2.82
CCDC189-206ENST00000543610 ZEB1P37275 1124 aaPredicted RBP32.65■■■□□ 2.82
CCDC189-206ENST00000543610 TOPBP1Q92547 1522 aa32.65■■■□□ 2.82
CCDC189-206ENST00000543610 IGF1RP08069 1367 aa32.63■■■□□ 2.81
CCDC189-206ENST00000543610 POLA1P09884 1462 aaPredicted RBP32.57■■■□□ 2.8
CCDC189-206ENST00000543610 ARAP1Q96P48 1450 aa32.56■■■□□ 2.8
CCDC189-206ENST00000543610 RAD54L2Q9Y4B4 1467 aa32.53■■■□□ 2.8
CCDC189-206ENST00000543610 ABCA10Q8WWZ4 1543 aa32.51■■■□□ 2.79
CCDC189-206ENST00000543610 CARMIL1Q5VZK9 1371 aa32.49■■■□□ 2.79
CCDC189-206ENST00000543610 URB2Q14146 1524 aaKnown RBP32.49■■■□□ 2.79
CCDC189-206ENST00000543610 PDS5BQ9NTI5 1447 aa32.46■■■□□ 2.79
CCDC189-206ENST00000543610 APLP2Q06481 763 aa32.44■■■□□ 2.78
CCDC189-206ENST00000543610 KIF21AQ7Z4S6 1674 aa32.43■■■□□ 2.78
CCDC189-206ENST00000543610 ARHGAP35Q9NRY4 1499 aa32.4■■■□□ 2.78
CCDC189-206ENST00000543610 WDR97A6NE52 1622 aa32.39■■■□□ 2.78
CCDC189-206ENST00000543610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.38■■■□□ 2.77
CCDC189-206ENST00000543610 CUL7Q14999 1698 aa32.29■■■□□ 2.76
CCDC189-206ENST00000543610 CCER1Q8TC90 406 aaPredicted RBP32.27■■■□□ 2.76
CCDC189-206ENST00000543610 ABCA5Q8WWZ7 1642 aa32.22■■■□□ 2.75
CCDC189-206ENST00000543610 TDRD9Q8NDG6 1382 aaKnown RBP32.13■■■□□ 2.73
CCDC189-206ENST00000543610 KANK4Q5T7N3 995 aaPredicted RBP32.12■■■□□ 2.73
CCDC189-206ENST00000543610 CTTNBP2Q8WZ74 1663 aa32.11■■■□□ 2.73
CCDC189-206ENST00000543610 GAPVD1Q14C86 1478 aa32.1■■■□□ 2.73
CCDC189-206ENST00000543610 TARBP1Q13395 1621 aaKnown RBP32.1■■■□□ 2.73
CCDC189-206ENST00000543610 HNRNPUL2Q1KMD3 747 aaKnown RBP32.07■■■□□ 2.72
CCDC189-206ENST00000543610 MRC2Q9UBG0 1479 aa32.03■■■□□ 2.72
CCDC189-206ENST00000543610 EFCAB5A4FU69 1503 aa31.98■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms