RNA–Protein interactions for RNA: ENST00000543610.5

CCDC189-206, Transcript of coiled-coil domain containing 189, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC189, Length 1,967 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-206ENST00000543610 NISCHQ9Y2I1 1504 aa46.09■■■■■ 4.97
CCDC189-206ENST00000543610 CCDC180Q9P1Z9 1646 aa39.76■■■■□ 3.95
CCDC189-206ENST00000543610 ZCCHC6Q5VYS8 1495 aaKnown RBP38.89■■■■□ 3.82
CCDC189-206ENST00000543610 SHROOM4Q9ULL8 1493 aa38.4■■■■□ 3.74
CCDC189-206ENST00000543610 DCAF8L2P0C7V8 631 aa38■■■■□ 3.67
CCDC189-206ENST00000543610 DCAF1Q9Y4B6 1507 aa37.99■■■■□ 3.67
CCDC189-206ENST00000543610 ABCC9O60706 1549 aa37.3■■■■□ 3.56
CCDC189-206ENST00000543610 SUPT5HO00267 1087 aaKnown RBP37.28■■■■□ 3.56
CCDC189-206ENST00000543610 MYO15BQ96JP2 1530 aa37.2■■■■□ 3.55
CCDC189-206ENST00000543610 SCRIBQ14160 1630 aa36.87■■■■□ 3.49
CCDC189-206ENST00000543610 NACADO15069 1562 aa36.83■■■■□ 3.49
CCDC189-206ENST00000543610 RB1CC1Q8TDY2 1594 aa36.37■■■■□ 3.41
CCDC189-206ENST00000543610 RSF1Q96T23 1441 aaPredicted RBP36.1■■■■□ 3.37
CCDC189-206ENST00000543610 CHIC1Q5VXU3 224 aa36.02■■■■□ 3.36
CCDC189-206ENST00000543610 CECR2Q9BXF3 1484 aa35.87■■■■□ 3.33
CCDC189-206ENST00000543610 UNC13AQ9UPW8 1703 aa35.84■■■■□ 3.33
CCDC189-206ENST00000543610 MROH2BQ7Z745 1585 aa35.73■■■■□ 3.31
CCDC189-206ENST00000543610 WIZO95785 1651 aa35.52■■■■□ 3.28
CCDC189-206ENST00000543610 BAZ1AQ9NRL2 1556 aaPredicted RBP35.51■■■■□ 3.28
CCDC189-206ENST00000543610 BICRAQ9NZM4 1560 aa35.35■■■■□ 3.25
CCDC189-206ENST00000543610 SMARCA4P51532 1647 aa35.3■■■■□ 3.24
CCDC189-206ENST00000543610 PABPN1Q86U42 306 aaKnown RBP eCLIP35.18■■■■□ 3.22
CCDC189-206ENST00000543610 TOP2AP11388 1531 aaKnown RBP35.05■■■■□ 3.2
CCDC189-206ENST00000543610 TRIM41Q8WV44 630 aa34.89■■■■□ 3.18
CCDC189-206ENST00000543610 EIF4G1Q04637 1599 aaKnown RBP34.84■■■■□ 3.17
CCDC189-206ENST00000543610 SMARCA2P51531 1590 aa34.8■■■■□ 3.16
CCDC189-206ENST00000543610 LOC105371045A0A1W2PR82 267 aa34.78■■■■□ 3.16
CCDC189-206ENST00000543610 CCDC88BA6NC98 1476 aa34.76■■■■□ 3.16
CCDC189-206ENST00000543610 PEG3Q9GZU2 1588 aa34.75■■■■□ 3.15
CCDC189-206ENST00000543610 ATAD2BQ9ULI0 1458 aa34.5■■■■□ 3.11
CCDC189-206ENST00000543610 FAM9AQ8IZU1 332 aaPredicted RBP34.43■■■■□ 3.1
CCDC189-206ENST00000543610 ABCC8Q09428 1581 aa34.39■■■■□ 3.1
CCDC189-206ENST00000543610 BAZ1BQ9UIG0 1483 aaKnown RBP34.37■■■■□ 3.09
CCDC189-206ENST00000543610 HMGXB3Q12766 1538 aa34.04■■■■□ 3.04
CCDC189-206ENST00000543610 EHMT2Q96KQ7 1210 aa34.03■■■■□ 3.04
CCDC189-206ENST00000543610 PCGF6Q9BYE7 350 aa34.01■■■■□ 3.03
CCDC189-206ENST00000543610 NCAPD3P42695 1498 aa34.01■■■■□ 3.03
CCDC189-206ENST00000543610 WRNQ14191 1432 aaPredicted RBP eCLIP33.95■■■■□ 3.02
CCDC189-206ENST00000543610 SOGA1O94964 1423 aa33.87■■■■□ 3.01
CCDC189-206ENST00000543610 SYNJ1O43426 1573 aa33.85■■■■□ 3.01
CCDC189-206ENST00000543610 EEA1Q15075 1411 aa33.77■■■■□ 3
CCDC189-206ENST00000543610 CC2D2AQ9P2K1 1620 aa33.73■■■□□ 2.99
CCDC189-206ENST00000543610 RUSC2Q8N2Y8 1516 aa33.73■■■□□ 2.99
CCDC189-206ENST00000543610 TRIM26Q12899 539 aaPredicted RBP33.68■■■□□ 2.98
CCDC189-206ENST00000543610 CSRNP3Q8WYN3 585 aa33.6■■■□□ 2.97
CCDC189-206ENST00000543610 HRCP23327 699 aa33.6■■■□□ 2.97
CCDC189-206ENST00000543610 TOP2BQ02880 1626 aa33.57■■■□□ 2.96
CCDC189-206ENST00000543610 BIVM-ERCC5R4GMW8 1640 aa33.52■■■□□ 2.96
CCDC189-206ENST00000543610 CFTRP13569 1480 aa33.51■■■□□ 2.95
CCDC189-206ENST00000543610 TNIKQ9UKE5 1360 aa33.45■■■□□ 2.95
CCDC189-206ENST00000543610 GOLGA3Q08378 1498 aa33.43■■■□□ 2.94
CCDC189-206ENST00000543610 PRDM2Q13029 1718 aa33.42■■■□□ 2.94
CCDC189-206ENST00000543610 CEP162Q5TB80 1403 aa33.41■■■□□ 2.94
CCDC189-206ENST00000543610 DNAJC5BQ9UF47 199 aa33.4■■■□□ 2.94
CCDC189-206ENST00000543610 KIF21BO75037 1637 aa33.37■■■□□ 2.93
CCDC189-206ENST00000543610 CUX1P39880 1505 aa33.34■■■□□ 2.93
CCDC189-206ENST00000543610 CEP164Q9UPV0 1460 aa33.34■■■□□ 2.93
CCDC189-206ENST00000543610 UBTFP17480 764 aaKnown RBP33.31■■■□□ 2.92
CCDC189-206ENST00000543610 CADPSQ9ULU8 1353 aa33.23■■■□□ 2.91
CCDC189-206ENST00000543610 PPARGC1BQ86YN6 1023 aaKnown RBP33.16■■■□□ 2.9
CCDC189-206ENST00000543610 RAPGEF2Q9Y4G8 1499 aa33.13■■■□□ 2.89
CCDC189-206ENST00000543610 KIF27Q86VH2 1401 aa32.98■■■□□ 2.87
CCDC189-206ENST00000543610 PRXQ9BXM0 1461 aa32.97■■■□□ 2.87
CCDC189-206ENST00000543610 ERICH3Q5RHP9 1530 aa32.97■■■□□ 2.87
CCDC189-206ENST00000543610 CLIP1P30622 1438 aa32.95■■■□□ 2.87
CCDC189-206ENST00000543610 FANCD2Q9BXW9 1451 aa32.92■■■□□ 2.86
CCDC189-206ENST00000543610 FGD5Q6ZNL6 1462 aa32.85■■■□□ 2.85
CCDC189-206ENST00000543610 NESP48681 1621 aa32.84■■■□□ 2.85
CCDC189-206ENST00000543610 CUX2O14529 1486 aa32.78■■■□□ 2.84
CCDC189-206ENST00000543610 TTBK1Q5TCY1 1321 aaPredicted RBP32.77■■■□□ 2.84
CCDC189-206ENST00000543610 VPS8Q8N3P4 1428 aa32.76■■■□□ 2.83
CCDC189-206ENST00000543610 LAMC3Q9Y6N6 1575 aa32.74■■■□□ 2.83
CCDC189-206ENST00000543610 DNMBPQ6XZF7 1577 aa32.73■■■□□ 2.83
CCDC189-206ENST00000543610 RANGAP1P46060 587 aaPredicted RBP32.69■■■□□ 2.82
CCDC189-206ENST00000543610 ZEB1P37275 1124 aaPredicted RBP32.65■■■□□ 2.82
CCDC189-206ENST00000543610 TOPBP1Q92547 1522 aa32.65■■■□□ 2.82
CCDC189-206ENST00000543610 IGF1RP08069 1367 aa32.63■■■□□ 2.81
CCDC189-206ENST00000543610 POLA1P09884 1462 aaPredicted RBP32.57■■■□□ 2.8
CCDC189-206ENST00000543610 ARAP1Q96P48 1450 aa32.56■■■□□ 2.8
CCDC189-206ENST00000543610 RAD54L2Q9Y4B4 1467 aa32.53■■■□□ 2.8
CCDC189-206ENST00000543610 ABCA10Q8WWZ4 1543 aa32.51■■■□□ 2.79
CCDC189-206ENST00000543610 CARMIL1Q5VZK9 1371 aa32.49■■■□□ 2.79
CCDC189-206ENST00000543610 URB2Q14146 1524 aaKnown RBP32.49■■■□□ 2.79
CCDC189-206ENST00000543610 PDS5BQ9NTI5 1447 aa32.46■■■□□ 2.79
CCDC189-206ENST00000543610 APLP2Q06481 763 aa32.44■■■□□ 2.78
CCDC189-206ENST00000543610 KIF21AQ7Z4S6 1674 aa32.43■■■□□ 2.78
CCDC189-206ENST00000543610 ARHGAP35Q9NRY4 1499 aa32.4■■■□□ 2.78
CCDC189-206ENST00000543610 WDR97A6NE52 1622 aa32.39■■■□□ 2.78
CCDC189-206ENST00000543610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.38■■■□□ 2.77
CCDC189-206ENST00000543610 CUL7Q14999 1698 aa32.29■■■□□ 2.76
CCDC189-206ENST00000543610 CCER1Q8TC90 406 aaPredicted RBP32.27■■■□□ 2.76
CCDC189-206ENST00000543610 ABCA5Q8WWZ7 1642 aa32.22■■■□□ 2.75
CCDC189-206ENST00000543610 TDRD9Q8NDG6 1382 aaKnown RBP32.13■■■□□ 2.73
CCDC189-206ENST00000543610 KANK4Q5T7N3 995 aaPredicted RBP32.12■■■□□ 2.73
CCDC189-206ENST00000543610 CTTNBP2Q8WZ74 1663 aa32.11■■■□□ 2.73
CCDC189-206ENST00000543610 GAPVD1Q14C86 1478 aa32.1■■■□□ 2.73
CCDC189-206ENST00000543610 TARBP1Q13395 1621 aaKnown RBP32.1■■■□□ 2.73
CCDC189-206ENST00000543610 HNRNPUL2Q1KMD3 747 aaKnown RBP32.07■■■□□ 2.72
CCDC189-206ENST00000543610 MRC2Q9UBG0 1479 aa32.03■■■□□ 2.72
CCDC189-206ENST00000543610 EFCAB5A4FU69 1503 aa31.98■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 180.1 ms