Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.68■■□□□ 1.06
PRAMEP78395 AC135279.3-201ENST00000610945 1311 ntBASIC21.68■■□□□ 1.06
PRAMEP78395 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEP78395 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEP78395 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEP78395 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PRAMEP78395 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
PRAMEP78395 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEP78395 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEP78395 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEP78395 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.67■■□□□ 1.06
PRAMEP78395 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEP78395 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.67■■□□□ 1.06
PRAMEP78395 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.67■■□□□ 1.06
PRAMEP78395 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.67■■□□□ 1.06
PRAMEP78395 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.67■■□□□ 1.06
PRAMEP78395 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEP78395 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEP78395 OR7E47P-201ENST00000546390 1422 ntBASIC21.66■■□□□ 1.06
PRAMEP78395 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.66■■□□□ 1.06
PRAMEP78395 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
PRAMEP78395 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEP78395 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PRAMEP78395 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.66■■□□□ 1.06
PRAMEP78395 AP005435.1-201ENST00000529293 1178 ntBASIC21.66■■□□□ 1.06
PRAMEP78395 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEP78395 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEP78395 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PRAMEP78395 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEP78395 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEP78395 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PRAMEP78395 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.65■■□□□ 1.06
PRAMEP78395 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEP78395 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEP78395 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEP78395 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PRAMEP78395 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEP78395 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEP78395 AC096631.2-201ENST00000436136 790 ntBASIC21.65■■□□□ 1.06
PRAMEP78395 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.65■■□□□ 1.06
PRAMEP78395 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEP78395 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PRAMEP78395 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.65■■□□□ 1.06
PRAMEP78395 OXCT2P1-201ENST00000447263 1535 ntBASIC21.65■■□□□ 1.06
PRAMEP78395 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEP78395 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
PRAMEP78395 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PRAMEP78395 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PRAMEP78395 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRAMEP78395 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
PRAMEP78395 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRAMEP78395 BX842568.3-201ENST00000418104 571 ntBASIC21.64■■□□□ 1.05
PRAMEP78395 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.64■■□□□ 1.05
PRAMEP78395 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.64■■□□□ 1.05
PRAMEP78395 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.64■■□□□ 1.05
PRAMEP78395 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
PRAMEP78395 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.64■■□□□ 1.05
PRAMEP78395 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRAMEP78395 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.64■■□□□ 1.05
PRAMEP78395 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRAMEP78395 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.64■■□□□ 1.05
PRAMEP78395 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.64■■□□□ 1.05
PRAMEP78395 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRAMEP78395 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
PRAMEP78395 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEP78395 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.63■■□□□ 1.05
PRAMEP78395 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEP78395 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.63■■□□□ 1.05
PRAMEP78395 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PRAMEP78395 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEP78395 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEP78395 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.63■■□□□ 1.05
PRAMEP78395 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEP78395 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEP78395 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.63■■□□□ 1.05
PRAMEP78395 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEP78395 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEP78395 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEP78395 FBXW4P1-201ENST00000426721 2239 ntBASIC21.62■■□□□ 1.05
PRAMEP78395 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEP78395 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.62■■□□□ 1.05
PRAMEP78395 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.62■■□□□ 1.05
PRAMEP78395 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.62■■□□□ 1.05
PRAMEP78395 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.62■■□□□ 1.05
PRAMEP78395 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PRAMEP78395 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.61■■□□□ 1.05
PRAMEP78395 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEP78395 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEP78395 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.61■■□□□ 1.05
PRAMEP78395 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEP78395 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.61■■□□□ 1.05
PRAMEP78395 PBX2P1-201ENST00000493219 1291 ntBASIC21.61■■□□□ 1.05
PRAMEP78395 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEP78395 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEP78395 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.61■■□□□ 1.05
PRAMEP78395 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.61■■□□□ 1.05
PRAMEP78395 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEP78395 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEP78395 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEP78395 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms