RNA–Protein interactions for RNA: ENST00000437827.1

SNRK-203, Transcript of SNF related kinase, humanhuman

TSL 2 BASIC

Gene SNRK, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-203ENST00000437827 NISCHQ9Y2I1 1504 aa49.95■■■■■ 5.59
SNRK-203ENST00000437827 CCDC180Q9P1Z9 1646 aa43.74■■■■■ 4.59
SNRK-203ENST00000437827 ZCCHC6Q5VYS8 1495 aaKnown RBP41.93■■■■■ 4.3
SNRK-203ENST00000437827 ABCC9O60706 1549 aa41.5■■■■■ 4.23
SNRK-203ENST00000437827 DCAF1Q9Y4B6 1507 aa41.39■■■■■ 4.22
SNRK-203ENST00000437827 DCAF8L2P0C7V8 631 aa41.07■■■■■ 4.17
SNRK-203ENST00000437827 MYO15BQ96JP2 1530 aa41.05■■■■■ 4.16
SNRK-203ENST00000437827 NACADO15069 1562 aa40.79■■■■■ 4.12
SNRK-203ENST00000437827 RB1CC1Q8TDY2 1594 aa40.48■■■■■ 4.07
SNRK-203ENST00000437827 SHROOM4Q9ULL8 1493 aa40.3■■■■■ 4.04
SNRK-203ENST00000437827 SCRIBQ14160 1630 aa40.05■■■■■ 4
SNRK-203ENST00000437827 UNC13AQ9UPW8 1703 aa39.66■■■■□ 3.94
SNRK-203ENST00000437827 BICRAQ9NZM4 1560 aa39.32■■■■□ 3.88
SNRK-203ENST00000437827 PABPN1Q86U42 306 aaKnown RBP eCLIP39.02■■■■□ 3.84
SNRK-203ENST00000437827 CECR2Q9BXF3 1484 aa38.79■■■■□ 3.8
SNRK-203ENST00000437827 RSF1Q96T23 1441 aaPredicted RBP38.61■■■■□ 3.77
SNRK-203ENST00000437827 SUPT5HO00267 1087 aaKnown RBP38.61■■■■□ 3.77
SNRK-203ENST00000437827 BAZ1AQ9NRL2 1556 aaPredicted RBP38.58■■■■□ 3.77
SNRK-203ENST00000437827 MROH2BQ7Z745 1585 aa38.55■■■■□ 3.76
SNRK-203ENST00000437827 SMARCA4P51532 1647 aa38.45■■■■□ 3.75
SNRK-203ENST00000437827 WIZO95785 1651 aa38.18■■■■□ 3.7
SNRK-203ENST00000437827 EIF4G1Q04637 1599 aaKnown RBP38.12■■■■□ 3.69
SNRK-203ENST00000437827 PEG3Q9GZU2 1588 aa38.09■■■■□ 3.69
SNRK-203ENST00000437827 ATAD2BQ9ULI0 1458 aa37.91■■■■□ 3.66
SNRK-203ENST00000437827 SMARCA2P51531 1590 aa37.87■■■■□ 3.65
SNRK-203ENST00000437827 TOP2AP11388 1531 aaKnown RBP37.83■■■■□ 3.65
SNRK-203ENST00000437827 NCAPD3P42695 1498 aa37.67■■■■□ 3.62
SNRK-203ENST00000437827 BAZ1BQ9UIG0 1483 aaKnown RBP37.63■■■■□ 3.61
SNRK-203ENST00000437827 CC2D2AQ9P2K1 1620 aa37.6■■■■□ 3.61
SNRK-203ENST00000437827 HMGXB3Q12766 1538 aa37.6■■■■□ 3.61
SNRK-203ENST00000437827 CCDC88BA6NC98 1476 aa37.41■■■■□ 3.58
SNRK-203ENST00000437827 CHIC1Q5VXU3 224 aa36.91■■■■□ 3.5
SNRK-203ENST00000437827 DNAJC5BQ9UF47 199 aa36.91■■■■□ 3.5
SNRK-203ENST00000437827 CFTRP13569 1480 aa36.74■■■■□ 3.47
SNRK-203ENST00000437827 CADPSQ9ULU8 1353 aa36.63■■■■□ 3.45
SNRK-203ENST00000437827 PRDM2Q13029 1718 aa36.5■■■■□ 3.43
SNRK-203ENST00000437827 ABCC8Q09428 1581 aa36.48■■■■□ 3.43
SNRK-203ENST00000437827 LAMC3Q9Y6N6 1575 aa36.41■■■■□ 3.42
SNRK-203ENST00000437827 TRIM41Q8WV44 630 aa36.38■■■■□ 3.41
SNRK-203ENST00000437827 NESP48681 1621 aa36.36■■■■□ 3.41
SNRK-203ENST00000437827 WRNQ14191 1432 aaPredicted RBP eCLIP36.32■■■■□ 3.4
SNRK-203ENST00000437827 FANCD2Q9BXW9 1451 aa36.21■■■■□ 3.39
SNRK-203ENST00000437827 SYNJ1O43426 1573 aa36.2■■■■□ 3.38
SNRK-203ENST00000437827 TOP2BQ02880 1626 aa36.1■■■■□ 3.37
SNRK-203ENST00000437827 PDS5BQ9NTI5 1447 aa36.1■■■■□ 3.37
SNRK-203ENST00000437827 BIVM-ERCC5R4GMW8 1640 aa36.08■■■■□ 3.37
SNRK-203ENST00000437827 CUX1P39880 1505 aa36.07■■■■□ 3.36
SNRK-203ENST00000437827 CEP164Q9UPV0 1460 aa36■■■■□ 3.35
SNRK-203ENST00000437827 KIF21AQ7Z4S6 1674 aa35.94■■■■□ 3.34
SNRK-203ENST00000437827 DNMBPQ6XZF7 1577 aa35.85■■■■□ 3.33
SNRK-203ENST00000437827 TOPBP1Q92547 1522 aa35.8■■■■□ 3.32
SNRK-203ENST00000437827 URB2Q14146 1524 aaKnown RBP35.79■■■■□ 3.32
SNRK-203ENST00000437827 SOGA1O94964 1423 aa35.74■■■■□ 3.31
SNRK-203ENST00000437827 FGD5Q6ZNL6 1462 aa35.7■■■■□ 3.31
SNRK-203ENST00000437827 MRC2Q9UBG0 1479 aa35.66■■■■□ 3.3
SNRK-203ENST00000437827 EEA1Q15075 1411 aa35.66■■■■□ 3.3
SNRK-203ENST00000437827 RUSC2Q8N2Y8 1516 aa35.62■■■■□ 3.29
SNRK-203ENST00000437827 POLA1P09884 1462 aaPredicted RBP35.61■■■■□ 3.29
SNRK-203ENST00000437827 FAM9AQ8IZU1 332 aaPredicted RBP35.6■■■■□ 3.29
SNRK-203ENST00000437827 ERCC6Q03468 1493 aa35.59■■■■□ 3.29
SNRK-203ENST00000437827 WDR62O43379 1518 aa35.54■■■■□ 3.28
SNRK-203ENST00000437827 THOC2Q8NI27 1593 aaKnown RBP35.5■■■■□ 3.27
SNRK-203ENST00000437827 ABCA10Q8WWZ4 1543 aa35.43■■■■□ 3.26
SNRK-203ENST00000437827 RAD54L2Q9Y4B4 1467 aa35.43■■■■□ 3.26
SNRK-203ENST00000437827 KIF27Q86VH2 1401 aa35.43■■■■□ 3.26
SNRK-203ENST00000437827 CSRNP3Q8WYN3 585 aa35.42■■■■□ 3.26
SNRK-203ENST00000437827 LOC105371045A0A1W2PR82 267 aa35.4■■■■□ 3.26
SNRK-203ENST00000437827 CUX2O14529 1486 aa35.38■■■■□ 3.25
SNRK-203ENST00000437827 WDR97A6NE52 1622 aa35.36■■■■□ 3.25
SNRK-203ENST00000437827 TARBP1Q13395 1621 aaKnown RBP35.32■■■■□ 3.24
SNRK-203ENST00000437827 KIF21BO75037 1637 aa35.22■■■■□ 3.23
SNRK-203ENST00000437827 IFT140Q96RY7 1462 aa35.18■■■■□ 3.22
SNRK-203ENST00000437827 IGF1RP08069 1367 aa35.17■■■■□ 3.22
SNRK-203ENST00000437827 ABCA5Q8WWZ7 1642 aa35.17■■■■□ 3.22
SNRK-203ENST00000437827 PRXQ9BXM0 1461 aa35.17■■■■□ 3.22
SNRK-203ENST00000437827 GOLGA3Q08378 1498 aa35.11■■■■□ 3.21
SNRK-203ENST00000437827 TDRD9Q8NDG6 1382 aaKnown RBP35.1■■■■□ 3.21
SNRK-203ENST00000437827 ERICH3Q5RHP9 1530 aa35.07■■■■□ 3.2
SNRK-203ENST00000437827 GAPVD1Q14C86 1478 aa35.06■■■■□ 3.2
SNRK-203ENST00000437827 RAPGEF2Q9Y4G8 1499 aa35.04■■■■□ 3.2
SNRK-203ENST00000437827 EHMT2Q96KQ7 1210 aa35.02■■■■□ 3.2
SNRK-203ENST00000437827 ZNF608Q9ULD9 1512 aaPredicted RBP34.98■■■■□ 3.19
SNRK-203ENST00000437827 TNIKQ9UKE5 1360 aa34.96■■■■□ 3.19
SNRK-203ENST00000437827 CARMIL1Q5VZK9 1371 aa34.95■■■■□ 3.19
SNRK-203ENST00000437827 AQRO60306 1485 aaKnown RBP eCLIP34.94■■■■□ 3.187e-6■■□□□ 13.1
SNRK-203ENST00000437827 CUL7Q14999 1698 aa34.93■■■■□ 3.18
SNRK-203ENST00000437827 PBRM1Q86U86 1689 aa34.88■■■■□ 3.17
SNRK-203ENST00000437827 EIF4G3O43432 1585 aaKnown RBP34.87■■■■□ 3.17
SNRK-203ENST00000437827 GRIN2BQ13224 1484 aa34.85■■■■□ 3.17
SNRK-203ENST00000437827 UBTFP17480 764 aaKnown RBP34.84■■■■□ 3.17
SNRK-203ENST00000437827 CEP162Q5TB80 1403 aa34.72■■■■□ 3.15
SNRK-203ENST00000437827 ADAMTS12P58397 1594 aa34.72■■■■□ 3.15
SNRK-203ENST00000437827 FHAD1B1AJZ9 1412 aa34.7■■■■□ 3.15
SNRK-203ENST00000437827 SNAPC4Q5SXM2 1469 aa34.63■■■■□ 3.13
SNRK-203ENST00000437827 MAGI1Q96QZ7 1491 aaPredicted RBP34.61■■■■□ 3.13
SNRK-203ENST00000437827 CLIP1P30622 1438 aa34.52■■■■□ 3.12
SNRK-203ENST00000437827 SYNJ2O15056 1496 aa34.47■■■■□ 3.11
SNRK-203ENST00000437827 CTTNBP2Q8WZ74 1663 aa34.47■■■■□ 3.11
SNRK-203ENST00000437827 GRIN2AQ12879 1464 aa34.44■■■■□ 3.1
SNRK-203ENST00000437827 ARHGAP35Q9NRY4 1499 aa34.32■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms