Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
PCDHGA2Q9Y5H1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PCDHGA2Q9Y5H1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
PCDHGA2Q9Y5H1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PCDHGA2Q9Y5H1 MIR4449-201ENST00000578365 66 ntBASIC27.83■■■□□ 2.05
PCDHGA2Q9Y5H1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
PCDHGA2Q9Y5H1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PCDHGA2Q9Y5H1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27.8■■■□□ 2.04
PCDHGA2Q9Y5H1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PCDHGA2Q9Y5H1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.77■■■□□ 2.04
PCDHGA2Q9Y5H1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
PCDHGA2Q9Y5H1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.76■■■□□ 2.03
PCDHGA2Q9Y5H1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
PCDHGA2Q9Y5H1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.75■■■□□ 2.03
PCDHGA2Q9Y5H1 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
PCDHGA2Q9Y5H1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
PCDHGA2Q9Y5H1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PCDHGA2Q9Y5H1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
PCDHGA2Q9Y5H1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PCDHGA2Q9Y5H1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
PCDHGA2Q9Y5H1 MIR639-201ENST00000384974 98 ntBASIC27.71■■■□□ 2.03
PCDHGA2Q9Y5H1 DUX4L29-201ENST00000425409 679 ntBASIC27.7■■■□□ 2.02
PCDHGA2Q9Y5H1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
PCDHGA2Q9Y5H1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
PCDHGA2Q9Y5H1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
PCDHGA2Q9Y5H1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.68■■■□□ 2.02
PCDHGA2Q9Y5H1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.68■■■□□ 2.02
PCDHGA2Q9Y5H1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.67■■■□□ 2.02
PCDHGA2Q9Y5H1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.67■■■□□ 2.02
PCDHGA2Q9Y5H1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PCDHGA2Q9Y5H1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.65■■■□□ 2.02
PCDHGA2Q9Y5H1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.65■■■□□ 2.02
PCDHGA2Q9Y5H1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PCDHGA2Q9Y5H1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
PCDHGA2Q9Y5H1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PCDHGA2Q9Y5H1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PCDHGA2Q9Y5H1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PCDHGA2Q9Y5H1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PCDHGA2Q9Y5H1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.58■■■□□ 2.01
PCDHGA2Q9Y5H1 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PCDHGA2Q9Y5H1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
PCDHGA2Q9Y5H1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
PCDHGA2Q9Y5H1 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.56■■■□□ 2
PCDHGA2Q9Y5H1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.56■■■□□ 2
PCDHGA2Q9Y5H1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
PCDHGA2Q9Y5H1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PCDHGA2Q9Y5H1 HSD17B1P1-201ENST00000590052 955 ntBASIC27.55■■■□□ 2
PCDHGA2Q9Y5H1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.54■■■□□ 2
PCDHGA2Q9Y5H1 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PCDHGA2Q9Y5H1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.52■■■□□ 2
PCDHGA2Q9Y5H1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PCDHGA2Q9Y5H1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
PCDHGA2Q9Y5H1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
PCDHGA2Q9Y5H1 WASH5P-204ENST00000632292 975 ntBASIC27.51■■□□□ 1.99
PCDHGA2Q9Y5H1 AC021231.2-201ENST00000594613 730 ntBASIC27.5■■□□□ 1.99
PCDHGA2Q9Y5H1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.5■■□□□ 1.99
PCDHGA2Q9Y5H1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHGA2Q9Y5H1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.49■■□□□ 1.99
PCDHGA2Q9Y5H1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCDHGA2Q9Y5H1 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCDHGA2Q9Y5H1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.48■■□□□ 1.99
PCDHGA2Q9Y5H1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.48■■□□□ 1.99
PCDHGA2Q9Y5H1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.47■■□□□ 1.99
PCDHGA2Q9Y5H1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PCDHGA2Q9Y5H1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PCDHGA2Q9Y5H1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.46■■□□□ 1.99
PCDHGA2Q9Y5H1 MIR3648-2-201ENST00000581792 180 ntBASIC27.46■■□□□ 1.99
PCDHGA2Q9Y5H1 MIR3648-1-201ENST00000615959 180 ntBASIC27.46■■□□□ 1.99
PCDHGA2Q9Y5H1 AC016575.1-201ENST00000607026 382 ntBASIC27.45■■□□□ 1.98
PCDHGA2Q9Y5H1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.45■■□□□ 1.98
PCDHGA2Q9Y5H1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.45■■□□□ 1.98
PCDHGA2Q9Y5H1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
PCDHGA2Q9Y5H1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHGA2Q9Y5H1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.43■■□□□ 1.98
PCDHGA2Q9Y5H1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHGA2Q9Y5H1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.43■■□□□ 1.98
PCDHGA2Q9Y5H1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.43■■□□□ 1.98
PCDHGA2Q9Y5H1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHGA2Q9Y5H1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.42■■□□□ 1.98
PCDHGA2Q9Y5H1 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
PCDHGA2Q9Y5H1 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PCDHGA2Q9Y5H1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.39■■□□□ 1.98
PCDHGA2Q9Y5H1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
PCDHGA2Q9Y5H1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHGA2Q9Y5H1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.37■■□□□ 1.97
PCDHGA2Q9Y5H1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.36■■□□□ 1.97
PCDHGA2Q9Y5H1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.36■■□□□ 1.97
PCDHGA2Q9Y5H1 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHGA2Q9Y5H1 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHGA2Q9Y5H1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
PCDHGA2Q9Y5H1 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHGA2Q9Y5H1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHGA2Q9Y5H1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHGA2Q9Y5H1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.3■■□□□ 1.96
PCDHGA2Q9Y5H1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
PCDHGA2Q9Y5H1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHGA2Q9Y5H1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHGA2Q9Y5H1 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.29■■□□□ 1.96
PCDHGA2Q9Y5H1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHGA2Q9Y5H1 AC108673.1-201ENST00000510422 1159 ntBASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms