Protein–RNA interactions for Protein: Q9Y5G8

PCDHGA5, Protocadherin gamma-A5, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA5Q9Y5G8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHGA5Q9Y5G8 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHGA5Q9Y5G8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.33■■□□□ 1.97
PCDHGA5Q9Y5G8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHGA5Q9Y5G8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHGA5Q9Y5G8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.31■■□□□ 1.96
PCDHGA5Q9Y5G8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.31■■□□□ 1.96
PCDHGA5Q9Y5G8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.31■■□□□ 1.96
PCDHGA5Q9Y5G8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHGA5Q9Y5G8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHGA5Q9Y5G8 MIR4449-201ENST00000578365 66 ntBASIC27.3■■□□□ 1.96
PCDHGA5Q9Y5G8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHGA5Q9Y5G8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHGA5Q9Y5G8 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHGA5Q9Y5G8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHGA5Q9Y5G8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHGA5Q9Y5G8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHGA5Q9Y5G8 DUX4L29-201ENST00000425409 679 ntBASIC27.27■■□□□ 1.96
PCDHGA5Q9Y5G8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.27■■□□□ 1.96
PCDHGA5Q9Y5G8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.27■■□□□ 1.96
PCDHGA5Q9Y5G8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
PCDHGA5Q9Y5G8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.24■■□□□ 1.95
PCDHGA5Q9Y5G8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHGA5Q9Y5G8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.23■■□□□ 1.95
PCDHGA5Q9Y5G8 WASH5P-204ENST00000632292 975 ntBASIC27.23■■□□□ 1.95
PCDHGA5Q9Y5G8 MIR639-201ENST00000384974 98 ntBASIC27.22■■□□□ 1.95
PCDHGA5Q9Y5G8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.22■■□□□ 1.95
PCDHGA5Q9Y5G8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
PCDHGA5Q9Y5G8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.21■■□□□ 1.95
PCDHGA5Q9Y5G8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.21■■□□□ 1.95
PCDHGA5Q9Y5G8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.21■■□□□ 1.95
PCDHGA5Q9Y5G8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCDHGA5Q9Y5G8 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHGA5Q9Y5G8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHGA5Q9Y5G8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHGA5Q9Y5G8 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHGA5Q9Y5G8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.15■■□□□ 1.94
PCDHGA5Q9Y5G8 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHGA5Q9Y5G8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHGA5Q9Y5G8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHGA5Q9Y5G8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
PCDHGA5Q9Y5G8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHGA5Q9Y5G8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.1■■□□□ 1.93
PCDHGA5Q9Y5G8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHGA5Q9Y5G8 AC021231.2-201ENST00000594613 730 ntBASIC27.09■■□□□ 1.93
PCDHGA5Q9Y5G8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.07■■□□□ 1.92
PCDHGA5Q9Y5G8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHGA5Q9Y5G8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.07■■□□□ 1.92
PCDHGA5Q9Y5G8 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHGA5Q9Y5G8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHGA5Q9Y5G8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.06■■□□□ 1.92
PCDHGA5Q9Y5G8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
PCDHGA5Q9Y5G8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHGA5Q9Y5G8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHGA5Q9Y5G8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHGA5Q9Y5G8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.05■■□□□ 1.92
PCDHGA5Q9Y5G8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHGA5Q9Y5G8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHGA5Q9Y5G8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.03■■□□□ 1.92
PCDHGA5Q9Y5G8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHGA5Q9Y5G8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.02■■□□□ 1.92
PCDHGA5Q9Y5G8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.01■■□□□ 1.91
PCDHGA5Q9Y5G8 MIR3648-2-201ENST00000581792 180 ntBASIC27■■□□□ 1.91
PCDHGA5Q9Y5G8 HSD17B1P1-201ENST00000590052 955 ntBASIC27■■□□□ 1.91
PCDHGA5Q9Y5G8 MIR3648-1-201ENST00000615959 180 ntBASIC27■■□□□ 1.91
PCDHGA5Q9Y5G8 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHGA5Q9Y5G8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.99■■□□□ 1.91
PCDHGA5Q9Y5G8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHGA5Q9Y5G8 AC016575.1-201ENST00000607026 382 ntBASIC26.97■■□□□ 1.91
PCDHGA5Q9Y5G8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.97■■□□□ 1.91
PCDHGA5Q9Y5G8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHGA5Q9Y5G8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
PCDHGA5Q9Y5G8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.95■■□□□ 1.9
PCDHGA5Q9Y5G8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.95■■□□□ 1.9
PCDHGA5Q9Y5G8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PCDHGA5Q9Y5G8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHGA5Q9Y5G8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.94■■□□□ 1.9
PCDHGA5Q9Y5G8 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHGA5Q9Y5G8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.93■■□□□ 1.9
PCDHGA5Q9Y5G8 AC108673.1-201ENST00000510422 1159 ntBASIC26.93■■□□□ 1.9
PCDHGA5Q9Y5G8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.93■■□□□ 1.9
PCDHGA5Q9Y5G8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.93■■□□□ 1.9
PCDHGA5Q9Y5G8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PCDHGA5Q9Y5G8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
PCDHGA5Q9Y5G8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.9■■□□□ 1.9
PCDHGA5Q9Y5G8 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHGA5Q9Y5G8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.9
PCDHGA5Q9Y5G8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.89■■□□□ 1.9
PCDHGA5Q9Y5G8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHGA5Q9Y5G8 LINC01971-201ENST00000617888 1048 ntBASIC26.88■■□□□ 1.89
PCDHGA5Q9Y5G8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHGA5Q9Y5G8 DUX4L11-201ENST00000611504 1267 ntBASIC26.86■■□□□ 1.89
PCDHGA5Q9Y5G8 DUX4L12-201ENST00000614593 1267 ntBASIC26.86■■□□□ 1.89
PCDHGA5Q9Y5G8 DUX4L14-201ENST00000621227 1267 ntBASIC26.86■■□□□ 1.89
PCDHGA5Q9Y5G8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.84■■□□□ 1.89
PCDHGA5Q9Y5G8 CR559946.2-201ENST00000623684 991 ntBASIC26.83■■□□□ 1.89
PCDHGA5Q9Y5G8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHGA5Q9Y5G8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHGA5Q9Y5G8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHGA5Q9Y5G8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms