Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.77■■■□□ 2.52
KDM3AQ9Y4C1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
KDM3AQ9Y4C1 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
KDM3AQ9Y4C1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
KDM3AQ9Y4C1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
KDM3AQ9Y4C1 AL391121.1-201ENST00000607967 1349 ntBASIC30.73■■■□□ 2.51
KDM3AQ9Y4C1 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
KDM3AQ9Y4C1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
KDM3AQ9Y4C1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
KDM3AQ9Y4C1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
KDM3AQ9Y4C1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
KDM3AQ9Y4C1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.5
KDM3AQ9Y4C1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
KDM3AQ9Y4C1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
KDM3AQ9Y4C1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
KDM3AQ9Y4C1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
KDM3AQ9Y4C1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
KDM3AQ9Y4C1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.67■■■□□ 2.5
KDM3AQ9Y4C1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
KDM3AQ9Y4C1 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
KDM3AQ9Y4C1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
KDM3AQ9Y4C1 RPS2P35-201ENST00000443417 897 ntBASIC30.63■■■□□ 2.49
KDM3AQ9Y4C1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
KDM3AQ9Y4C1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.61■■■□□ 2.49
KDM3AQ9Y4C1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
KDM3AQ9Y4C1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
KDM3AQ9Y4C1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
KDM3AQ9Y4C1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
KDM3AQ9Y4C1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
KDM3AQ9Y4C1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.53■■■□□ 2.48
KDM3AQ9Y4C1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
KDM3AQ9Y4C1 AP006261.1-201ENST00000584783 668 ntBASIC30.51■■■□□ 2.48
KDM3AQ9Y4C1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
KDM3AQ9Y4C1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
KDM3AQ9Y4C1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
KDM3AQ9Y4C1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.49■■■□□ 2.47
KDM3AQ9Y4C1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
KDM3AQ9Y4C1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
KDM3AQ9Y4C1 AL162393.1-201ENST00000437852 946 ntBASIC30.47■■■□□ 2.47
KDM3AQ9Y4C1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.47■■■□□ 2.47
KDM3AQ9Y4C1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
KDM3AQ9Y4C1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
KDM3AQ9Y4C1 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
KDM3AQ9Y4C1 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.46■■■□□ 2.47
KDM3AQ9Y4C1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
KDM3AQ9Y4C1 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.44■■■□□ 2.46
KDM3AQ9Y4C1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.44■■■□□ 2.46
KDM3AQ9Y4C1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.43■■■□□ 2.46
KDM3AQ9Y4C1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
KDM3AQ9Y4C1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
KDM3AQ9Y4C1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
KDM3AQ9Y4C1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
KDM3AQ9Y4C1 WASH5P-204ENST00000632292 975 ntBASIC30.39■■■□□ 2.46
KDM3AQ9Y4C1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.45
KDM3AQ9Y4C1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
KDM3AQ9Y4C1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
KDM3AQ9Y4C1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.38■■■□□ 2.45
KDM3AQ9Y4C1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
KDM3AQ9Y4C1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.37■■■□□ 2.45
KDM3AQ9Y4C1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
KDM3AQ9Y4C1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.37■■■□□ 2.45
KDM3AQ9Y4C1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.35■■■□□ 2.45
KDM3AQ9Y4C1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
KDM3AQ9Y4C1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
KDM3AQ9Y4C1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
KDM3AQ9Y4C1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.33■■■□□ 2.45
KDM3AQ9Y4C1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
KDM3AQ9Y4C1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.31■■■□□ 2.44
KDM3AQ9Y4C1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.29■■■□□ 2.44
KDM3AQ9Y4C1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
KDM3AQ9Y4C1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.28■■■□□ 2.44
KDM3AQ9Y4C1 MIR3665-201ENST00000578708 105 ntBASIC30.28■■■□□ 2.44
KDM3AQ9Y4C1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
KDM3AQ9Y4C1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.27■■■□□ 2.44
KDM3AQ9Y4C1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.27■■■□□ 2.44
KDM3AQ9Y4C1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.27■■■□□ 2.44
KDM3AQ9Y4C1 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.27■■■□□ 2.44
KDM3AQ9Y4C1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.26■■■□□ 2.43
KDM3AQ9Y4C1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
KDM3AQ9Y4C1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
KDM3AQ9Y4C1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
KDM3AQ9Y4C1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
KDM3AQ9Y4C1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.25■■■□□ 2.43
KDM3AQ9Y4C1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
KDM3AQ9Y4C1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
KDM3AQ9Y4C1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
KDM3AQ9Y4C1 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.23■■■□□ 2.43
KDM3AQ9Y4C1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
KDM3AQ9Y4C1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
KDM3AQ9Y4C1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
KDM3AQ9Y4C1 MIR762-201ENST00000390236 83 ntBASIC30.21■■■□□ 2.43
KDM3AQ9Y4C1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
KDM3AQ9Y4C1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
KDM3AQ9Y4C1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.19■■■□□ 2.42
KDM3AQ9Y4C1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
KDM3AQ9Y4C1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.19■■■□□ 2.42
KDM3AQ9Y4C1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.18■■■□□ 2.42
KDM3AQ9Y4C1 DUX4L28-201ENST00000623687 678 ntBASIC30.18■■■□□ 2.42
KDM3AQ9Y4C1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
KDM3AQ9Y4C1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms