Protein–RNA interactions for Protein: Q9NR30

DDX21, Nucleolar RNA helicase 2, humanhuman

Known RBP eCLIP

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX21Q9NR30 MAP2K2-206ENST00000597263 552 ntTSL 312.71□□□□□ -0.374e-10■■■■■ 29
DDX21Q9NR30 MAP2K2-207ENST00000599021 314 ntTSL 510.95□□□□□ -0.664e-10■■■■■ 29
DDX21Q9NR30 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC24.37■■□□□ 1.492e-6■■■■■ 28.3
DDX21Q9NR30 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.412e-6■■■■■ 28.3
DDX21Q9NR30 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.352e-6■■■■■ 28.3
DDX21Q9NR30 STXBP2-211ENST00000597068 1785 ntTSL 1 (best)19.6■□□□□ 0.732e-6■■■■■ 28.3
DDX21Q9NR30 STXBP2-214ENST00000599400 811 ntTSL 519.06■□□□□ 0.642e-6■■■■■ 28.3
DDX21Q9NR30 STXBP2-217ENST00000599737 1523 ntTSL 518.92■□□□□ 0.622e-6■■■■■ 28.3
DDX21Q9NR30 STXBP2-219ENST00000600702 770 ntTSL 217.19■□□□□ 0.342e-6■■■■■ 28.3
DDX21Q9NR30 OGFOD3-208ENST00000580445 1274 ntTSL 1 (best)27.87■■■□□ 2.058e-7■■■■■ 27.9
DDX21Q9NR30 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.978e-7■■■■■ 27.9
DDX21Q9NR30 OGFOD3-203ENST00000577495 872 ntTSL 327.29■■□□□ 1.968e-7■■■■■ 27.9
DDX21Q9NR30 OGFOD3-204ENST00000577606 598 ntTSL 425.91■■□□□ 1.748e-7■■■■■ 27.9
DDX21Q9NR30 OGFOD3-212ENST00000583897 896 ntTSL 524.75■■□□□ 1.558e-7■■■■■ 27.9
DDX21Q9NR30 PAXIP1-204ENST00000457196 3990 ntTSL 524.6■■□□□ 1.538e-7■■■■■ 27.9
DDX21Q9NR30 DPH7-210ENST00000479650 1797 ntTSL 523.54■■□□□ 1.368e-7■■■■■ 27.9
DDX21Q9NR30 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC23.41■■□□□ 1.348e-7■■■■■ 27.9
DDX21Q9NR30 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.328e-7■■■■■ 27.9
DDX21Q9NR30 DPH7-207ENST00000475100 919 ntTSL 321.7■■□□□ 1.068e-7■■■■■ 27.9
DDX21Q9NR30 DPH7-206ENST00000472113 1414 ntTSL 519.99■□□□□ 0.798e-7■■■■■ 27.9
DDX21Q9NR30 DPH7-212ENST00000485189 797 ntTSL 319.78■□□□□ 0.768e-7■■■■■ 27.9
DDX21Q9NR30 DPH7-209ENST00000477690 1220 ntTSL 318.53■□□□□ 0.568e-7■■■■■ 27.9
DDX21Q9NR30 DPH7-204ENST00000467768 750 ntTSL 518.51■□□□□ 0.558e-7■■■■■ 27.9
DDX21Q9NR30 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.558e-7■■■■■ 27.9
DDX21Q9NR30 AC007952.4-201ENST00000573866 637 ntBASIC18.08■□□□□ 0.488e-7■■■■■ 27.9
DDX21Q9NR30 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.28e-7■■■■■ 27.9
DDX21Q9NR30 SNORD3D-202ENST00000630092 217 ntBASIC14.39□□□□□ -0.118e-7■■■■■ 27.9
DDX21Q9NR30 SNORD3D-201ENST00000619178 218 ntBASIC14.08□□□□□ -0.168e-7■■■■■ 27.9
DDX21Q9NR30 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.248e-7■■■■■ 27.9
DDX21Q9NR30 PAXIP1-201ENST00000397192 3711 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.288e-7■■■■■ 27.9
DDX21Q9NR30 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.358e-7■■■■■ 27.9
DDX21Q9NR30 PAXIP1-203ENST00000419436 521 ntTSL 48.31□□□□□ -1.088e-7■■■■■ 27.9
DDX21Q9NR30 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.58□□□□□ -1.28e-7■■■■■ 27.9
DDX21Q9NR30 RAD23B-205ENST00000457811 811 ntTSL 36.59□□□□□ -1.358e-7■■■■■ 27.9
DDX21Q9NR30 PEAK1-209ENST00000567808 520 ntTSL 327.32■■□□□ 1.964e-9■■■■■ 27.5
DDX21Q9NR30 PEAK1-206ENST00000564328 2323 ntTSL 524.05■■□□□ 1.444e-9■■■■■ 27.5
DDX21Q9NR30 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.95□□□□□ -1.144e-9■■■■■ 27.5
DDX21Q9NR30 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.484e-9■■■■■ 27.5
DDX21Q9NR30 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.514e-9■■■■■ 27.5
DDX21Q9NR30 PEAK1-207ENST00000565820 558 ntTSL 44.44□□□□□ -1.74e-9■■■■■ 27.5
DDX21Q9NR30 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.037e-12■■■■□ 25.2
DDX21Q9NR30 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC27.72■■■□□ 2.037e-12■■■■□ 25.2
DDX21Q9NR30 AL139158.2-201ENST00000432922 593 ntTSL 527.6■■■□□ 2.015e-6■■■■□ 24.8
DDX21Q9NR30 EPRS-204ENST00000477030 1526 ntTSL 1 (best)26.72■■□□□ 1.875e-6■■■■□ 24.8
DDX21Q9NR30 USP53-203ENST00000507597 503 ntTSL 325.78■■□□□ 1.722e-8■■■■□ 24.8
DDX21Q9NR30 FOXK2-202ENST00000473637 3462 ntTSL 1 (best)24.36■■□□□ 1.495e-6■■■■□ 24.8
DDX21Q9NR30 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.425e-6■■■■□ 24.8
DDX21Q9NR30 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.62■□□□□ 0.735e-6■■■■□ 24.8
DDX21Q9NR30 FOXK2-211ENST00000575578 571 ntTSL 218.58■□□□□ 0.565e-6■■■■□ 24.8
DDX21Q9NR30 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.495e-6■■■■□ 24.8
DDX21Q9NR30 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.25e-6■■■■□ 24.8
DDX21Q9NR30 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.085e-6■■■■□ 24.8
DDX21Q9NR30 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.055e-6■■■■□ 24.8
DDX21Q9NR30 USP53-201ENST00000274030 5936 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.342e-8■■■■□ 24.8
DDX21Q9NR30 EPRS-206ENST00000609181 2968 ntTSL 1 (best)12.86□□□□□ -0.355e-6■■■■□ 24.8
DDX21Q9NR30 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.035e-6■■■■□ 24.8
DDX21Q9NR30 USP53-206ENST00000510737 534 ntTSL 58.26□□□□□ -1.092e-8■■■■□ 24.8
DDX21Q9NR30 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.25e-6■■■■□ 24.8
DDX21Q9NR30 EPRS-202ENST00000464052 770 ntTSL 25.93□□□□□ -1.465e-6■■■■□ 24.8
DDX21Q9NR30 CBFA2T3-210ENST00000569464 1327 ntTSL 1 (best)17.95■□□□□ 0.467e-8■■■■□ 24
DDX21Q9NR30 CBFA2T3-209ENST00000569443 469 ntTSL 516.49■□□□□ 0.237e-8■■■■□ 24
DDX21Q9NR30 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.187e-8■■■■□ 24
DDX21Q9NR30 CBFA2T3-203ENST00000562719 539 ntTSL 513.5□□□□□ -0.257e-8■■■■□ 24
DDX21Q9NR30 SND1-201ENST00000354725 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.421e-6■■■■□ 24
DDX21Q9NR30 FO393415.1-201ENST00000314481 2255 ntTSL 2 BASIC10.5□□□□□ -0.733e-10■■■■□ 23.3
DDX21Q9NR30 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19.04■□□□□ 0.641e-323■■■■□ 22.4
DDX21Q9NR30 RNA5SP426-201ENST00000362901 121 ntBASIC10.55□□□□□ -0.721e-323■■■■□ 22.4
DDX21Q9NR30 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC24.9■■□□□ 1.584e-6■■■■□ 21
DDX21Q9NR30 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC22.62■■□□□ 1.214e-6■■■■□ 21
DDX21Q9NR30 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.01■□□□□ 0.954e-6■■■■□ 21
DDX21Q9NR30 RTN4-211ENST00000438462 656 ntTSL 516.38■□□□□ 0.214e-6■■■■□ 21
DDX21Q9NR30 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC15.69■□□□□ 0.14e-6■■■■□ 21
DDX21Q9NR30 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC9.87□□□□□ -0.834e-6■■■■□ 21
DDX21Q9NR30 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.99□□□□□ -1.134e-6■■■■□ 21
DDX21Q9NR30 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.69□□□□□ -1.664e-6■■■■□ 21
DDX21Q9NR30 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.67□□□□□ -1.664e-6■■■■□ 21
DDX21Q9NR30 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC36.5■■■■□ 3.435e-7■■■■□ 20.7
DDX21Q9NR30 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC7.12□□□□□ -1.274e-15■■■■□ 19.8
DDX21Q9NR30 CBFA2T3-204ENST00000563640 664 ntTSL 220.42■□□□□ 0.864e-6■■■□□ 19
DDX21Q9NR30 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.174e-6■■■□□ 19
DDX21Q9NR30 HERC3-205ENST00000426683 559 ntTSL 423.36■■□□□ 1.333e-6■■■□□ 18.6
DDX21Q9NR30 HERC3-211ENST00000513325 582 ntTSL 522.11■■□□□ 1.133e-6■■■□□ 18.6
DDX21Q9NR30 HERC3-206ENST00000431413 761 ntTSL 519.75■□□□□ 0.753e-6■■■□□ 18.6
DDX21Q9NR30 SCART1-201ENST00000462252 3451 ntTSL 219.27■□□□□ 0.683e-6■■■□□ 18.6
DDX21Q9NR30 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.513e-6■■■□□ 18.6
DDX21Q9NR30 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC15.28■□□□□ 0.043e-6■■■□□ 18.6
DDX21Q9NR30 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.093e-6■■■□□ 18.6
DDX21Q9NR30 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC14.06□□□□□ -0.163e-6■■■□□ 18.6
DDX21Q9NR30 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.193e-6■■■□□ 18.6
DDX21Q9NR30 PCSK9-202ENST00000490692 3891 ntTSL 212.81□□□□□ -0.363e-6■■■□□ 18.6
DDX21Q9NR30 HERC3-204ENST00000422770 579 ntTSL 412.48□□□□□ -0.413e-6■■■□□ 18.6
DDX21Q9NR30 RN7SKP290-201ENST00000606842 195 ntBASIC12.05□□□□□ -0.483e-6■■■□□ 18.6
DDX21Q9NR30 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.653e-6■■■□□ 18.6
DDX21Q9NR30 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.289e-23■■■□□ 18.5
DDX21Q9NR30 GMPR-203ENST00000543191 675 ntTSL 213.21□□□□□ -0.299e-23■■■□□ 18.5
DDX21Q9NR30 ANKRD30BL-204ENST00000470729 1425 ntTSL 1 (best)21.92■■□□□ 1.14e-7■■■□□ 17.6
DDX21Q9NR30 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC24.73■■□□□ 1.556e-9■■■□□ 17.4
DDX21Q9NR30 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.356e-9■■■□□ 17.4
DDX21Q9NR30 GPM6B-206ENST00000468080 587 ntTSL 416.94■□□□□ 0.36e-9■■■□□ 17.4
DDX21Q9NR30 GPM6B-203ENST00000356942 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.226e-9■■■□□ 17.4
Retrieved 100 of 1,140 protein–RNA pairs in 105.8 ms