RNA–Protein interactions for RNA: ENST00000457811.1

RAD23B-205, Transcript of RAD23 homolog B, nucleotide excision repair protein, humanhuman

TSL 3

Gene RAD23B, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23B-205ENST00000457811 AEBP2Q6ZN18 517 aaPredicted RBP25.72■■□□□ 1.71
RAD23B-205ENST00000457811 CHIC1Q5VXU3 224 aa25.42■■□□□ 1.66
RAD23B-205ENST00000457811 PHF23Q9BUL5 403 aaPredicted RBP22.34■■□□□ 1.17
RAD23B-205ENST00000457811 SENP3Q9H4L4 574 aaPredicted RBP21.86■■□□□ 1.09
RAD23B-205ENST00000457811 PLPPR3Q6T4P5 718 aa20.81■□□□□ 0.92
RAD23B-205ENST00000457811 FOXD1Q16676 465 aa20.21■□□□□ 0.83
RAD23B-205ENST00000457811 ADRA2BP18089 450 aa19.67■□□□□ 0.74
RAD23B-205ENST00000457811 PPP6R1Q9UPN7 881 aa19.64■□□□□ 0.73
RAD23B-205ENST00000457811 PIAS4Q8N2W9 510 aaPredicted RBP19.18■□□□□ 0.66
RAD23B-205ENST00000457811 MSH5O43196 834 aa18.59■□□□□ 0.57
RAD23B-205ENST00000457811 PPP4R3CPQ6ZMV5 832 aa18.36■□□□□ 0.53
RAD23B-205ENST00000457811 KCNA4P22459 653 aa18.21■□□□□ 0.51
RAD23B-205ENST00000457811 POTEDQ86YR6 584 aa18.12■□□□□ 0.49
RAD23B-205ENST00000457811 SCAF1Q9H7N4 1312 aaKnown RBP18.08■□□□□ 0.49
RAD23B-205ENST00000457811 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
RAD23B-205ENST00000457811 CNKSR2Q8WXI2 1034 aa17.79■□□□□ 0.44
RAD23B-205ENST00000457811 MAPK8IP2Q13387 824 aaPredicted RBP17.77■□□□□ 0.44
RAD23B-205ENST00000457811 NPM3O75607 178 aaKnown RBP17.67■□□□□ 0.42
RAD23B-205ENST00000457811 DMRT2Q9Y5R5 561 aa17.46■□□□□ 0.39
RAD23B-205ENST00000457811 SLC4A1APQ9BWU0 796 aaKnown RBP17.43■□□□□ 0.38
RAD23B-205ENST00000457811 RNF216Q9NWF9 866 aaPredicted RBP17.36■□□□□ 0.37
RAD23B-205ENST00000457811 EHMT2Q96KQ7 1210 aa17.25■□□□□ 0.35
RAD23B-205ENST00000457811 HOXD11P31277 338 aaPredicted RBP17.19■□□□□ 0.34
RAD23B-205ENST00000457811 DNAJC5BQ9UF47 199 aa17.06■□□□□ 0.32
RAD23B-205ENST00000457811 CSRNP3Q8WYN3 585 aa16.88■□□□□ 0.29
RAD23B-205ENST00000457811 DCAF8L1A6NGE4 600 aa16.8■□□□□ 0.28
RAD23B-205ENST00000457811 ZBTB22O15209 634 aa16.71■□□□□ 0.27
RAD23B-205ENST00000457811 FOXD4L1Q9NU39 408 aa16.71■□□□□ 0.27
RAD23B-205ENST00000457811 SLC4A2P04920 1241 aa16.59■□□□□ 0.25
RAD23B-205ENST00000457811 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.48■□□□□ 0.233e-9■□□□□ 9.6
RAD23B-205ENST00000457811 MYCNP04198 464 aaPredicted RBP16.35■□□□□ 0.21
RAD23B-205ENST00000457811 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
RAD23B-205ENST00000457811 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
RAD23B-205ENST00000457811 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
RAD23B-205ENST00000457811 ATXN8OSP0DMR3 200 aa16.09■□□□□ 0.17
RAD23B-205ENST00000457811 SAMD1Q6SPF0 538 aaPredicted RBP16.07■□□□□ 0.16
RAD23B-205ENST00000457811 APLP2Q06481 763 aa15.92■□□□□ 0.14
RAD23B-205ENST00000457811 RNF39Q9H2S5 420 aa15.9■□□□□ 0.14
RAD23B-205ENST00000457811 ATF5Q9Y2D1 282 aaPredicted RBP15.84■□□□□ 0.13
RAD23B-205ENST00000457811 C1QBPQ07021 282 aaKnown RBP15.78■□□□□ 0.12
RAD23B-205ENST00000457811 CAPN15O75808 1086 aa15.63■□□□□ 0.09
RAD23B-205ENST00000457811 SPINK5Q9NQ38 1064 aaPredicted RBP15.63■□□□□ 0.09
RAD23B-205ENST00000457811 TRHP20396 242 aaPredicted RBP15.62■□□□□ 0.09
RAD23B-205ENST00000457811 ZNF219Q9P2Y4 722 aaPredicted RBP15.62■□□□□ 0.09
RAD23B-205ENST00000457811 POLA2Q14181 598 aa15.4■□□□□ 0.06
RAD23B-205ENST00000457811 CACNB1Q02641 598 aaPredicted RBP15.37■□□□□ 0.05
RAD23B-205ENST00000457811 ABCB7O75027 752 aa15.33■□□□□ 0.04
RAD23B-205ENST00000457811 FKBP8Q14318 412 aa15.3■□□□□ 0.04
RAD23B-205ENST00000457811 FBLN2P98095 1184 aa15.27■□□□□ 0.04
RAD23B-205ENST00000457811 DSG3P32926 999 aa15.24■□□□□ 0.03
RAD23B-205ENST00000457811 ZBTB12Q9Y330 459 aaPredicted RBP15.19■□□□□ 0.02
RAD23B-205ENST00000457811 MKRN4PQ13434 485 aaPredicted RBP15.16■□□□□ 0.02
RAD23B-205ENST00000457811 SPDYE4A6NLX3 237 aa15.02■□□□□ -0
RAD23B-205ENST00000457811 OSCARQ8IYS5 282 aa14.85□□□□□ -0.03
RAD23B-205ENST00000457811 ZNF692Q9BU19 519 aaPredicted RBP14.79□□□□□ -0.04
RAD23B-205ENST00000457811 SPDYE2BA6NHP3 402 aa14.78□□□□□ -0.04
RAD23B-205ENST00000457811 SPDYE6P0CI01 402 aa14.78□□□□□ -0.04
RAD23B-205ENST00000457811 SPDYE2Q495Y8 402 aa14.78□□□□□ -0.04
RAD23B-205ENST00000457811 PROM2Q8N271 834 aa14.72□□□□□ -0.05
RAD23B-205ENST00000457811 FBXO3Q9UK99 471 aa14.72□□□□□ -0.05
RAD23B-205ENST00000457811 SSUH2Q9Y2M2 353 aa14.64□□□□□ -0.07
RAD23B-205ENST00000457811 PABPN1Q86U42 306 aaKnown RBP eCLIP14.59□□□□□ -0.07
RAD23B-205ENST00000457811 RBM42Q9BTD8 480 aaKnown RBP14.57□□□□□ -0.08
RAD23B-205ENST00000457811 VASPP50552 380 aaPredicted RBP14.45□□□□□ -0.1
RAD23B-205ENST00000457811 AKT1S1Q96B36 256 aa14.43□□□□□ -0.1
RAD23B-205ENST00000457811 STAG3Q9UJ98 1225 aa14.43□□□□□ -0.1
RAD23B-205ENST00000457811 AMER1Q5JTC6 1135 aaPredicted RBP14.42□□□□□ -0.1
RAD23B-205ENST00000457811 RTN4Q9NQC3 1192 aaKnown RBP14.33□□□□□ -0.12
RAD23B-205ENST00000457811 SPDYE1Q8NFV5 336 aaPredicted RBP14.3□□□□□ -0.12
RAD23B-205ENST00000457811 REM2Q8IYK8 340 aaPredicted RBP14.28□□□□□ -0.12
RAD23B-205ENST00000457811 PLCD3Q8N3E9 789 aa14.28□□□□□ -0.12
RAD23B-205ENST00000457811 MIER1Q8N108 512 aa14.26□□□□□ -0.13
RAD23B-205ENST00000457811 IFNLR1Q8IU57 520 aaPredicted RBP14.25□□□□□ -0.13
RAD23B-205ENST00000457811 CLEC11AQ9Y240 323 aa14.25□□□□□ -0.13
RAD23B-205ENST00000457811 KLHL34Q8N239 644 aa14.23□□□□□ -0.13
RAD23B-205ENST00000457811 PLEKHG5O94827 1062 aa14.22□□□□□ -0.13
RAD23B-205ENST00000457811 PRR29P0C7W0 189 aa14.16□□□□□ -0.14
RAD23B-205ENST00000457811 SPOCK2Q92563 424 aa14.1□□□□□ -0.15
RAD23B-205ENST00000457811 ZBTB47Q9UFB7 747 aaPredicted RBP14.1□□□□□ -0.15
RAD23B-205ENST00000457811 PITPNM1O00562 1244 aa14.09□□□□□ -0.15
RAD23B-205ENST00000457811 POTEHQ6S545 545 aa14.01□□□□□ -0.17
RAD23B-205ENST00000457811 CREBZFQ9NS37 354 aa13.96□□□□□ -0.17
RAD23B-205ENST00000457811 PKD2Q13563 968 aa13.87□□□□□ -0.19
RAD23B-205ENST00000457811 CIZ1Q9ULV3 898 aaPredicted RBP13.87□□□□□ -0.19
RAD23B-205ENST00000457811 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
RAD23B-205ENST00000457811 NPM1P06748 294 aaKnown RBP eCLIP13.82□□□□□ -0.2
RAD23B-205ENST00000457811 CHADLQ6NUI6 762 aa13.82□□□□□ -0.2
RAD23B-205ENST00000457811 MNX1P50219 401 aaPredicted RBP13.81□□□□□ -0.2
RAD23B-205ENST00000457811 ECM2O94769 699 aaPredicted RBP13.8□□□□□ -0.2
RAD23B-205ENST00000457811 DCAF8L2P0C7V8 631 aa13.78□□□□□ -0.2
RAD23B-205ENST00000457811 PRKAR2AP13861 404 aaKnown RBP13.78□□□□□ -0.2
RAD23B-205ENST00000457811 NUBP1P53384 320 aa13.78□□□□□ -0.2
RAD23B-205ENST00000457811 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.21
RAD23B-205ENST00000457811 GSE1Q14687 1217 aa13.77□□□□□ -0.21
RAD23B-205ENST00000457811 DCAF8Q5TAQ9 597 aa13.77□□□□□ -0.21
RAD23B-205ENST00000457811 FAM212AQ96EL1 285 aa13.73□□□□□ -0.21
RAD23B-205ENST00000457811 FARP1Q9Y4F1 1045 aaPredicted RBP13.73□□□□□ -0.21
RAD23B-205ENST00000457811 TRIM41Q8WV44 630 aa13.71□□□□□ -0.21
RAD23B-205ENST00000457811 PIP4P2Q8N4L2 257 aa13.69□□□□□ -0.22
RAD23B-205ENST00000457811 RASEFQ8IZ41 740 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms