RNA–Protein interactions for RNA: ENST00000462252.1

SCART1-201, Transcript of scavenger receptor family member expressed on T cells 1, humanhuman

TSL 2

Gene SCART1, Length 3,451 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCART1-201ENST00000462252 NISCHQ9Y2I1 1504 aa32.73■■■□□ 2.83
SCART1-201ENST00000462252 DCAF8L2P0C7V8 631 aa29.07■■■□□ 2.24
SCART1-201ENST00000462252 SHROOM4Q9ULL8 1493 aa28.72■■■□□ 2.19
SCART1-201ENST00000462252 SUPT5HO00267 1087 aaKnown RBP28.47■■■□□ 2.15
SCART1-201ENST00000462252 CCDC180Q9P1Z9 1646 aa27.52■■■□□ 2
SCART1-201ENST00000462252 ZCCHC6Q5VYS8 1495 aaKnown RBP27.41■■□□□ 1.98
SCART1-201ENST00000462252 PCGF6Q9BYE7 350 aa27.39■■□□□ 1.98
SCART1-201ENST00000462252 EHMT2Q96KQ7 1210 aa27.38■■□□□ 1.97
SCART1-201ENST00000462252 ABCC9O60706 1549 aa27.21■■□□□ 1.95
SCART1-201ENST00000462252 PPARGC1BQ86YN6 1023 aaKnown RBP27.11■■□□□ 1.93
SCART1-201ENST00000462252 LOC105371045A0A1W2PR82 267 aa26.78■■□□□ 1.88
SCART1-201ENST00000462252 FAM9AQ8IZU1 332 aaPredicted RBP26.72■■□□□ 1.87
SCART1-201ENST00000462252 HRCP23327 699 aa26.66■■□□□ 1.86
SCART1-201ENST00000462252 CHIC1Q5VXU3 224 aa26.63■■□□□ 1.85
SCART1-201ENST00000462252 SCRIBQ14160 1630 aa26.53■■□□□ 1.84
SCART1-201ENST00000462252 TTBK1Q5TCY1 1321 aaPredicted RBP26.43■■□□□ 1.82
SCART1-201ENST00000462252 DCAF1Q9Y4B6 1507 aa26.35■■□□□ 1.81
SCART1-201ENST00000462252 PABPN1Q86U42 306 aaKnown RBP eCLIP26.31■■□□□ 1.8
SCART1-201ENST00000462252 MYO15BQ96JP2 1530 aa26.22■■□□□ 1.79
SCART1-201ENST00000462252 NACADO15069 1562 aa25.94■■□□□ 1.74
SCART1-201ENST00000462252 TRIM41Q8WV44 630 aa25.94■■□□□ 1.74
SCART1-201ENST00000462252 RSF1Q96T23 1441 aaPredicted RBP25.9■■□□□ 1.74
SCART1-201ENST00000462252 CECR2Q9BXF3 1484 aa25.9■■□□□ 1.74
SCART1-201ENST00000462252 RB1CC1Q8TDY2 1594 aa25.8■■□□□ 1.72
SCART1-201ENST00000462252 TRIM26Q12899 539 aaPredicted RBP25.76■■□□□ 1.71
SCART1-201ENST00000462252 MROH2BQ7Z745 1585 aa25.58■■□□□ 1.68
SCART1-201ENST00000462252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.57■■□□□ 1.68
SCART1-201ENST00000462252 CCER1Q8TC90 406 aaPredicted RBP25.52■■□□□ 1.68
SCART1-201ENST00000462252 RANGAP1P46060 587 aaPredicted RBP25.51■■□□□ 1.67
SCART1-201ENST00000462252 YTHDC1Q96MU7 727 aaKnown RBP25.47■■□□□ 1.67
SCART1-201ENST00000462252 WIZO95785 1651 aa25.34■■□□□ 1.65
SCART1-201ENST00000462252 SCAF1Q9H7N4 1312 aaKnown RBP25.22■■□□□ 1.63
SCART1-201ENST00000462252 BAZ1AQ9NRL2 1556 aaPredicted RBP25.18■■□□□ 1.62
SCART1-201ENST00000462252 ZEB1P37275 1124 aaPredicted RBP25.16■■□□□ 1.62
SCART1-201ENST00000462252 UBTFP17480 764 aaKnown RBP25.02■■□□□ 1.6
SCART1-201ENST00000462252 GTF3C3Q9Y5Q9 886 aa24.96■■□□□ 1.59
SCART1-201ENST00000462252 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
SCART1-201ENST00000462252 SMARCA4P51532 1647 aa24.94■■□□□ 1.58
SCART1-201ENST00000462252 UNC13AQ9UPW8 1703 aa24.94■■□□□ 1.58
SCART1-201ENST00000462252 HNRNPUL2Q1KMD3 747 aaKnown RBP24.92■■□□□ 1.58
SCART1-201ENST00000462252 NEUROD1Q13562 356 aa24.91■■□□□ 1.58
SCART1-201ENST00000462252 DIEXFQ68CQ4 756 aaKnown RBP24.9■■□□□ 1.58
SCART1-201ENST00000462252 BICRAQ9NZM4 1560 aa24.88■■□□□ 1.57
SCART1-201ENST00000462252 ABCC8Q09428 1581 aa24.84■■□□□ 1.57
SCART1-201ENST00000462252 CENPBP07199 599 aaPredicted RBP24.81■■□□□ 1.56
SCART1-201ENST00000462252 BAZ1BQ9UIG0 1483 aaKnown RBP24.76■■□□□ 1.55
SCART1-201ENST00000462252 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
SCART1-201ENST00000462252 PELP1Q8IZL8 1130 aaKnown RBP24.69■■□□□ 1.54
SCART1-201ENST00000462252 ATAD2BQ9ULI0 1458 aa24.68■■□□□ 1.54
SCART1-201ENST00000462252 ACIN1Q9UKV3 1341 aaKnown RBP24.68■■□□□ 1.54
SCART1-201ENST00000462252 CSRNP3Q8WYN3 585 aa24.66■■□□□ 1.54
SCART1-201ENST00000462252 SOGA1O94964 1423 aa24.63■■□□□ 1.53
SCART1-201ENST00000462252 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
SCART1-201ENST00000462252 ITGAEP38570 1179 aa24.55■■□□□ 1.52
SCART1-201ENST00000462252 APLP2Q06481 763 aa24.54■■□□□ 1.52
SCART1-201ENST00000462252 WRNQ14191 1432 aaPredicted RBP eCLIP24.53■■□□□ 1.52
SCART1-201ENST00000462252 RUSC2Q8N2Y8 1516 aa24.48■■□□□ 1.51
SCART1-201ENST00000462252 EIF4G1Q04637 1599 aaKnown RBP24.35■■□□□ 1.49
SCART1-201ENST00000462252 MIER1Q8N108 512 aa24.29■■□□□ 1.48
SCART1-201ENST00000462252 ATP1B4Q9UN42 357 aaPredicted RBP24.28■■□□□ 1.48
SCART1-201ENST00000462252 BCANQ96GW7 911 aa24.25■■□□□ 1.47
SCART1-201ENST00000462252 ZNF316A6NFI3 1004 aaPredicted RBP24.23■■□□□ 1.47
SCART1-201ENST00000462252 DNAJC5BQ9UF47 199 aa24.22■■□□□ 1.47
SCART1-201ENST00000462252 CEP162Q5TB80 1403 aa24.19■■□□□ 1.46
SCART1-201ENST00000462252 NCAPD3P42695 1498 aa24.16■■□□□ 1.46
SCART1-201ENST00000462252 P3H3Q8IVL6 736 aa24.1■■□□□ 1.45
SCART1-201ENST00000462252 PEG3Q9GZU2 1588 aa24.1■■□□□ 1.45
SCART1-201ENST00000462252 SYNJ1O43426 1573 aa24.09■■□□□ 1.45
SCART1-201ENST00000462252 TNIKQ9UKE5 1360 aa24.05■■□□□ 1.44
SCART1-201ENST00000462252 GOLGA3Q08378 1498 aa24.03■■□□□ 1.44
SCART1-201ENST00000462252 EEA1Q15075 1411 aa24.02■■□□□ 1.44
SCART1-201ENST00000462252 CADPSQ9ULU8 1353 aa23.99■■□□□ 1.43
SCART1-201ENST00000462252 CLIP1P30622 1438 aa23.97■■□□□ 1.43
SCART1-201ENST00000462252 CNGB1Q14028 1251 aaPredicted RBP23.97■■□□□ 1.43
SCART1-201ENST00000462252 CC2D2AQ9P2K1 1620 aa23.95■■□□□ 1.43
SCART1-201ENST00000462252 RAPGEF2Q9Y4G8 1499 aa23.95■■□□□ 1.42
SCART1-201ENST00000462252 CEP164Q9UPV0 1460 aa23.92■■□□□ 1.42
SCART1-201ENST00000462252 HIRIP3Q9BW71 556 aaPredicted RBP23.91■■□□□ 1.42
SCART1-201ENST00000462252 NESP48681 1621 aa23.87■■□□□ 1.41
SCART1-201ENST00000462252 KIF27Q86VH2 1401 aa23.86■■□□□ 1.41
SCART1-201ENST00000462252 HMGXB3Q12766 1538 aa23.86■■□□□ 1.41
SCART1-201ENST00000462252 CUX2O14529 1486 aa23.85■■□□□ 1.41
SCART1-201ENST00000462252 CFTRP13569 1480 aa23.84■■□□□ 1.41
SCART1-201ENST00000462252 CUX1P39880 1505 aa23.77■■□□□ 1.4
SCART1-201ENST00000462252 FANCD2Q9BXW9 1451 aa23.73■■□□□ 1.39
SCART1-201ENST00000462252 ARID3CA6NKF2 412 aa23.72■■□□□ 1.39
SCART1-201ENST00000462252 TDRD9Q8NDG6 1382 aaKnown RBP23.69■■□□□ 1.38
SCART1-201ENST00000462252 TOP2BQ02880 1626 aa23.67■■□□□ 1.38
SCART1-201ENST00000462252 RAD54L2Q9Y4B4 1467 aa23.67■■□□□ 1.38
SCART1-201ENST00000462252 CARMIL1Q5VZK9 1371 aa23.67■■□□□ 1.38
SCART1-201ENST00000462252 KANK4Q5T7N3 995 aaPredicted RBP23.65■■□□□ 1.38
SCART1-201ENST00000462252 FBLN2P98095 1184 aa23.65■■□□□ 1.38
SCART1-201ENST00000462252 FGD5Q6ZNL6 1462 aa23.64■■□□□ 1.38
SCART1-201ENST00000462252 FAM50AQ14320 339 aaKnown RBP23.64■■□□□ 1.37
SCART1-201ENST00000462252 KCNH8Q96L42 1107 aa23.64■■□□□ 1.37
SCART1-201ENST00000462252 IGF1RP08069 1367 aa23.6■■□□□ 1.37
SCART1-201ENST00000462252 DDX10Q13206 875 aaKnown RBP23.6■■□□□ 1.37
SCART1-201ENST00000462252 TRIM52Q96A61 297 aa23.59■■□□□ 1.37
SCART1-201ENST00000462252 VPS8Q8N3P4 1428 aa23.55■■□□□ 1.36
SCART1-201ENST00000462252 FKBP8Q14318 412 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms