Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 WASH5P-204ENST00000632292 975 ntBASIC30.26■■■□□ 2.43
ATP6V0A4Q9HBG4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
ATP6V0A4Q9HBG4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
ATP6V0A4Q9HBG4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.25■■■□□ 2.43
ATP6V0A4Q9HBG4 AP006261.1-201ENST00000584783 668 ntBASIC30.25■■■□□ 2.43
ATP6V0A4Q9HBG4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.24■■■□□ 2.43
ATP6V0A4Q9HBG4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
ATP6V0A4Q9HBG4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
ATP6V0A4Q9HBG4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
ATP6V0A4Q9HBG4 AL162393.1-201ENST00000437852 946 ntBASIC30.23■■■□□ 2.43
ATP6V0A4Q9HBG4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
ATP6V0A4Q9HBG4 AC120057.4-201ENST00000624722 1615 ntBASIC30.22■■■□□ 2.43
ATP6V0A4Q9HBG4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.21■■■□□ 2.43
ATP6V0A4Q9HBG4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
ATP6V0A4Q9HBG4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.18■■■□□ 2.42
ATP6V0A4Q9HBG4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.18■■■□□ 2.42
ATP6V0A4Q9HBG4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.17■■■□□ 2.42
ATP6V0A4Q9HBG4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
ATP6V0A4Q9HBG4 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.16■■■□□ 2.42
ATP6V0A4Q9HBG4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
ATP6V0A4Q9HBG4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
ATP6V0A4Q9HBG4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.16■■■□□ 2.42
ATP6V0A4Q9HBG4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
ATP6V0A4Q9HBG4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
ATP6V0A4Q9HBG4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
ATP6V0A4Q9HBG4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.12■■■□□ 2.41
ATP6V0A4Q9HBG4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
ATP6V0A4Q9HBG4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
ATP6V0A4Q9HBG4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.11■■■□□ 2.41
ATP6V0A4Q9HBG4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
ATP6V0A4Q9HBG4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
ATP6V0A4Q9HBG4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
ATP6V0A4Q9HBG4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
ATP6V0A4Q9HBG4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
ATP6V0A4Q9HBG4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
ATP6V0A4Q9HBG4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
ATP6V0A4Q9HBG4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
ATP6V0A4Q9HBG4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
ATP6V0A4Q9HBG4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
ATP6V0A4Q9HBG4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
ATP6V0A4Q9HBG4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
ATP6V0A4Q9HBG4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.03■■■□□ 2.4
ATP6V0A4Q9HBG4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.02■■■□□ 2.4
ATP6V0A4Q9HBG4 MIR3665-201ENST00000578708 105 ntBASIC30.02■■■□□ 2.4
ATP6V0A4Q9HBG4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.01■■■□□ 2.39
ATP6V0A4Q9HBG4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30■■■□□ 2.39
ATP6V0A4Q9HBG4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30■■■□□ 2.39
ATP6V0A4Q9HBG4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
ATP6V0A4Q9HBG4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.98■■■□□ 2.39
ATP6V0A4Q9HBG4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
ATP6V0A4Q9HBG4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ATP6V0A4Q9HBG4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ATP6V0A4Q9HBG4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ATP6V0A4Q9HBG4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
ATP6V0A4Q9HBG4 MIR762-201ENST00000390236 83 ntBASIC29.94■■■□□ 2.38
ATP6V0A4Q9HBG4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
ATP6V0A4Q9HBG4 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.94■■■□□ 2.38
ATP6V0A4Q9HBG4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
ATP6V0A4Q9HBG4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
ATP6V0A4Q9HBG4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
ATP6V0A4Q9HBG4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.92■■■□□ 2.38
ATP6V0A4Q9HBG4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
ATP6V0A4Q9HBG4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.9■■■□□ 2.38
ATP6V0A4Q9HBG4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
ATP6V0A4Q9HBG4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
ATP6V0A4Q9HBG4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.88■■■□□ 2.37
ATP6V0A4Q9HBG4 DUX4L28-201ENST00000623687 678 ntBASIC29.88■■■□□ 2.37
ATP6V0A4Q9HBG4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
ATP6V0A4Q9HBG4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
ATP6V0A4Q9HBG4 AC087741.3-201ENST00000624270 1347 ntBASIC29.86■■■□□ 2.37
ATP6V0A4Q9HBG4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.86■■■□□ 2.37
ATP6V0A4Q9HBG4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
ATP6V0A4Q9HBG4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
ATP6V0A4Q9HBG4 AC005559.1-201ENST00000589661 871 ntBASIC29.84■■■□□ 2.37
ATP6V0A4Q9HBG4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
ATP6V0A4Q9HBG4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
ATP6V0A4Q9HBG4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
ATP6V0A4Q9HBG4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.82■■■□□ 2.36
ATP6V0A4Q9HBG4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
ATP6V0A4Q9HBG4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
ATP6V0A4Q9HBG4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.81■■■□□ 2.36
ATP6V0A4Q9HBG4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
ATP6V0A4Q9HBG4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
ATP6V0A4Q9HBG4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
ATP6V0A4Q9HBG4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
ATP6V0A4Q9HBG4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.79■■■□□ 2.36
ATP6V0A4Q9HBG4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
ATP6V0A4Q9HBG4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
ATP6V0A4Q9HBG4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
ATP6V0A4Q9HBG4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.77■■■□□ 2.36
ATP6V0A4Q9HBG4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
ATP6V0A4Q9HBG4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
ATP6V0A4Q9HBG4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.76■■■□□ 2.35
ATP6V0A4Q9HBG4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
ATP6V0A4Q9HBG4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.76■■■□□ 2.35
ATP6V0A4Q9HBG4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ATP6V0A4Q9HBG4 AC044849.2-201ENST00000606596 710 ntBASIC29.75■■■□□ 2.35
ATP6V0A4Q9HBG4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC29.74■■■□□ 2.35
ATP6V0A4Q9HBG4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ATP6V0A4Q9HBG4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms