Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.04■■■□□ 2.72
EFCC1Q9HA90 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
EFCC1Q9HA90 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
EFCC1Q9HA90 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
EFCC1Q9HA90 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
EFCC1Q9HA90 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
EFCC1Q9HA90 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.98■■■□□ 2.71
EFCC1Q9HA90 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
EFCC1Q9HA90 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
EFCC1Q9HA90 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.96■■■□□ 2.71
EFCC1Q9HA90 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
EFCC1Q9HA90 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.95■■■□□ 2.71
EFCC1Q9HA90 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.95■■■□□ 2.71
EFCC1Q9HA90 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
EFCC1Q9HA90 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
EFCC1Q9HA90 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
EFCC1Q9HA90 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
EFCC1Q9HA90 MIR4449-201ENST00000578365 66 ntBASIC31.91■■■□□ 2.7
EFCC1Q9HA90 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
EFCC1Q9HA90 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
EFCC1Q9HA90 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
EFCC1Q9HA90 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
EFCC1Q9HA90 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
EFCC1Q9HA90 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
EFCC1Q9HA90 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.86■■■□□ 2.69
EFCC1Q9HA90 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.85■■■□□ 2.69
EFCC1Q9HA90 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.85■■■□□ 2.69
EFCC1Q9HA90 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
EFCC1Q9HA90 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.84■■■□□ 2.69
EFCC1Q9HA90 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
EFCC1Q9HA90 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
EFCC1Q9HA90 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
EFCC1Q9HA90 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.8■■■□□ 2.68
EFCC1Q9HA90 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
EFCC1Q9HA90 MIR639-201ENST00000384974 98 ntBASIC31.78■■■□□ 2.68
EFCC1Q9HA90 DUX4L29-201ENST00000425409 679 ntBASIC31.77■■■□□ 2.68
EFCC1Q9HA90 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.75■■■□□ 2.67
EFCC1Q9HA90 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.74■■■□□ 2.67
EFCC1Q9HA90 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.72■■■□□ 2.67
EFCC1Q9HA90 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.72■■■□□ 2.67
EFCC1Q9HA90 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
EFCC1Q9HA90 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
EFCC1Q9HA90 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
EFCC1Q9HA90 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
EFCC1Q9HA90 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.68■■■□□ 2.66
EFCC1Q9HA90 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
EFCC1Q9HA90 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.66■■■□□ 2.66
EFCC1Q9HA90 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.65■■■□□ 2.66
EFCC1Q9HA90 HSD17B1P1-201ENST00000590052 955 ntBASIC31.64■■■□□ 2.66
EFCC1Q9HA90 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.64■■■□□ 2.66
EFCC1Q9HA90 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
EFCC1Q9HA90 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
EFCC1Q9HA90 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
EFCC1Q9HA90 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
EFCC1Q9HA90 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
EFCC1Q9HA90 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
EFCC1Q9HA90 WASH5P-204ENST00000632292 975 ntBASIC31.57■■■□□ 2.64
EFCC1Q9HA90 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
EFCC1Q9HA90 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.56■■■□□ 2.64
EFCC1Q9HA90 AC021231.2-201ENST00000594613 730 ntBASIC31.56■■■□□ 2.64
EFCC1Q9HA90 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
EFCC1Q9HA90 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.55■■■□□ 2.64
EFCC1Q9HA90 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.55■■■□□ 2.64
EFCC1Q9HA90 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
EFCC1Q9HA90 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.53■■■□□ 2.64
EFCC1Q9HA90 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
EFCC1Q9HA90 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.52■■■□□ 2.64
EFCC1Q9HA90 MIR3648-2-201ENST00000581792 180 ntBASIC31.52■■■□□ 2.64
EFCC1Q9HA90 AC016575.1-201ENST00000607026 382 ntBASIC31.52■■■□□ 2.64
EFCC1Q9HA90 MIR3648-1-201ENST00000615959 180 ntBASIC31.52■■■□□ 2.64
EFCC1Q9HA90 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.52■■■□□ 2.64
EFCC1Q9HA90 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
EFCC1Q9HA90 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
EFCC1Q9HA90 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
EFCC1Q9HA90 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.51■■■□□ 2.63
EFCC1Q9HA90 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.5■■■□□ 2.63
EFCC1Q9HA90 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
EFCC1Q9HA90 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.49■■■□□ 2.63
EFCC1Q9HA90 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.49■■■□□ 2.63
EFCC1Q9HA90 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
EFCC1Q9HA90 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
EFCC1Q9HA90 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
EFCC1Q9HA90 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.44■■■□□ 2.62
EFCC1Q9HA90 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
EFCC1Q9HA90 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
EFCC1Q9HA90 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
EFCC1Q9HA90 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
EFCC1Q9HA90 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
EFCC1Q9HA90 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.4■■■□□ 2.62
EFCC1Q9HA90 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.39■■■□□ 2.62
EFCC1Q9HA90 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
EFCC1Q9HA90 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
EFCC1Q9HA90 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
EFCC1Q9HA90 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
EFCC1Q9HA90 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.35■■■□□ 2.61
EFCC1Q9HA90 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
EFCC1Q9HA90 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
EFCC1Q9HA90 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.6
EFCC1Q9HA90 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.32■■■□□ 2.6
EFCC1Q9HA90 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.32■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms