Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC33.18■■■□□ 2.9
RPAP1Q9BWH6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC33.18■■■□□ 2.9
RPAP1Q9BWH6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC33.17■■■□□ 2.9
RPAP1Q9BWH6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC33.17■■■□□ 2.9
RPAP1Q9BWH6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
RPAP1Q9BWH6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC33.16■■■□□ 2.9
RPAP1Q9BWH6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
RPAP1Q9BWH6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
RPAP1Q9BWH6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC33.15■■■□□ 2.9
RPAP1Q9BWH6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC33.14■■■□□ 2.9
RPAP1Q9BWH6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC33.14■■■□□ 2.9
RPAP1Q9BWH6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
RPAP1Q9BWH6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC33.13■■■□□ 2.89
RPAP1Q9BWH6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC33.13■■■□□ 2.89
RPAP1Q9BWH6 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
RPAP1Q9BWH6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
RPAP1Q9BWH6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC33.1■■■□□ 2.89
RPAP1Q9BWH6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
RPAP1Q9BWH6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC33.09■■■□□ 2.89
RPAP1Q9BWH6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
RPAP1Q9BWH6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
RPAP1Q9BWH6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC33.06■■■□□ 2.88
RPAP1Q9BWH6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
RPAP1Q9BWH6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC33.05■■■□□ 2.88
RPAP1Q9BWH6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
RPAP1Q9BWH6 MIR3665-201ENST00000578708 105 ntBASIC33.03■■■□□ 2.88
RPAP1Q9BWH6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC33.03■■■□□ 2.88
RPAP1Q9BWH6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC33.03■■■□□ 2.88
RPAP1Q9BWH6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
RPAP1Q9BWH6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC33.02■■■□□ 2.88
RPAP1Q9BWH6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC33.02■■■□□ 2.88
RPAP1Q9BWH6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
RPAP1Q9BWH6 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
RPAP1Q9BWH6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC33■■■□□ 2.87
RPAP1Q9BWH6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
RPAP1Q9BWH6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
RPAP1Q9BWH6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.97■■■□□ 2.87
RPAP1Q9BWH6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC32.96■■■□□ 2.87
RPAP1Q9BWH6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
RPAP1Q9BWH6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.96■■■□□ 2.87
RPAP1Q9BWH6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.95■■■□□ 2.86
RPAP1Q9BWH6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
RPAP1Q9BWH6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC32.95■■■□□ 2.86
RPAP1Q9BWH6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.86
RPAP1Q9BWH6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC32.95■■■□□ 2.86
RPAP1Q9BWH6 DUX4L28-201ENST00000623687 678 ntBASIC32.95■■■□□ 2.86
RPAP1Q9BWH6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
RPAP1Q9BWH6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
RPAP1Q9BWH6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
RPAP1Q9BWH6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC32.93■■■□□ 2.86
RPAP1Q9BWH6 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
RPAP1Q9BWH6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
RPAP1Q9BWH6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.91■■■□□ 2.86
RPAP1Q9BWH6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
RPAP1Q9BWH6 CHML-205ENST00000638160 705 ntTSL 3 BASIC32.9■■■□□ 2.86
RPAP1Q9BWH6 AC087741.3-201ENST00000624270 1347 ntBASIC32.9■■■□□ 2.86
RPAP1Q9BWH6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
RPAP1Q9BWH6 MIR762-201ENST00000390236 83 ntBASIC32.87■■■□□ 2.85
RPAP1Q9BWH6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC32.86■■■□□ 2.85
RPAP1Q9BWH6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC32.85■■■□□ 2.85
RPAP1Q9BWH6 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
RPAP1Q9BWH6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
RPAP1Q9BWH6 AC120057.4-201ENST00000624722 1615 ntBASIC32.84■■■□□ 2.85
RPAP1Q9BWH6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC32.83■■■□□ 2.85
RPAP1Q9BWH6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.82■■■□□ 2.84
RPAP1Q9BWH6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.81■■■□□ 2.84
RPAP1Q9BWH6 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
RPAP1Q9BWH6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
RPAP1Q9BWH6 AC005559.1-201ENST00000589661 871 ntBASIC32.79■■■□□ 2.84
RPAP1Q9BWH6 AC044849.2-201ENST00000606596 710 ntBASIC32.79■■■□□ 2.84
RPAP1Q9BWH6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC32.78■■■□□ 2.84
RPAP1Q9BWH6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
RPAP1Q9BWH6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
RPAP1Q9BWH6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
RPAP1Q9BWH6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
RPAP1Q9BWH6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC32.75■■■□□ 2.83
RPAP1Q9BWH6 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
RPAP1Q9BWH6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
RPAP1Q9BWH6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC32.74■■■□□ 2.83
RPAP1Q9BWH6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC32.74■■■□□ 2.83
RPAP1Q9BWH6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
RPAP1Q9BWH6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC32.73■■■□□ 2.83
RPAP1Q9BWH6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.73■■■□□ 2.83
RPAP1Q9BWH6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
RPAP1Q9BWH6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
RPAP1Q9BWH6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC32.72■■■□□ 2.83
RPAP1Q9BWH6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
RPAP1Q9BWH6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
RPAP1Q9BWH6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
RPAP1Q9BWH6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
RPAP1Q9BWH6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
RPAP1Q9BWH6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC32.7■■■□□ 2.82
RPAP1Q9BWH6 WASH5P-204ENST00000632292 975 ntBASIC32.69■■■□□ 2.82
RPAP1Q9BWH6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC32.68■■■□□ 2.82
RPAP1Q9BWH6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
RPAP1Q9BWH6 ABHD17AP4-201ENST00000411545 909 ntBASIC32.68■■■□□ 2.82
RPAP1Q9BWH6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
RPAP1Q9BWH6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
RPAP1Q9BWH6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC32.67■■■□□ 2.82
RPAP1Q9BWH6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC32.66■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms