Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
ZKSCAN3Q9BRR0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
ZKSCAN3Q9BRR0 WASH5P-204ENST00000632292 975 ntBASIC32.05■■■□□ 2.72
ZKSCAN3Q9BRR0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
ZKSCAN3Q9BRR0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
ZKSCAN3Q9BRR0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.04■■■□□ 2.72
ZKSCAN3Q9BRR0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.04■■■□□ 2.72
ZKSCAN3Q9BRR0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
ZKSCAN3Q9BRR0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
ZKSCAN3Q9BRR0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
ZKSCAN3Q9BRR0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
ZKSCAN3Q9BRR0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
ZKSCAN3Q9BRR0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.01■■■□□ 2.71
ZKSCAN3Q9BRR0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.71
ZKSCAN3Q9BRR0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
ZKSCAN3Q9BRR0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
ZKSCAN3Q9BRR0 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32■■■□□ 2.71
ZKSCAN3Q9BRR0 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
ZKSCAN3Q9BRR0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.98■■■□□ 2.71
ZKSCAN3Q9BRR0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
ZKSCAN3Q9BRR0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
ZKSCAN3Q9BRR0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
ZKSCAN3Q9BRR0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
ZKSCAN3Q9BRR0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ZKSCAN3Q9BRR0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
ZKSCAN3Q9BRR0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ZKSCAN3Q9BRR0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
ZKSCAN3Q9BRR0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
ZKSCAN3Q9BRR0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ZKSCAN3Q9BRR0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
ZKSCAN3Q9BRR0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ZKSCAN3Q9BRR0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
ZKSCAN3Q9BRR0 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
ZKSCAN3Q9BRR0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.87■■■□□ 2.69
ZKSCAN3Q9BRR0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
ZKSCAN3Q9BRR0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
ZKSCAN3Q9BRR0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.84■■■□□ 2.69
ZKSCAN3Q9BRR0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
ZKSCAN3Q9BRR0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
ZKSCAN3Q9BRR0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
ZKSCAN3Q9BRR0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ZKSCAN3Q9BRR0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.81■■■□□ 2.68
ZKSCAN3Q9BRR0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
ZKSCAN3Q9BRR0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
ZKSCAN3Q9BRR0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
ZKSCAN3Q9BRR0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
ZKSCAN3Q9BRR0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
ZKSCAN3Q9BRR0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
ZKSCAN3Q9BRR0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ZKSCAN3Q9BRR0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.7■■■□□ 2.66
ZKSCAN3Q9BRR0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
ZKSCAN3Q9BRR0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.69■■■□□ 2.66
ZKSCAN3Q9BRR0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.69■■■□□ 2.66
ZKSCAN3Q9BRR0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
ZKSCAN3Q9BRR0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
ZKSCAN3Q9BRR0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
ZKSCAN3Q9BRR0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
ZKSCAN3Q9BRR0 AL161658.1-201ENST00000623641 1967 ntBASIC31.68■■■□□ 2.66
ZKSCAN3Q9BRR0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
ZKSCAN3Q9BRR0 MIR762-201ENST00000390236 83 ntBASIC31.66■■■□□ 2.66
ZKSCAN3Q9BRR0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
ZKSCAN3Q9BRR0 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.65■■■□□ 2.66
ZKSCAN3Q9BRR0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
ZKSCAN3Q9BRR0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
ZKSCAN3Q9BRR0 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
ZKSCAN3Q9BRR0 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
ZKSCAN3Q9BRR0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.62■■■□□ 2.65
ZKSCAN3Q9BRR0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
ZKSCAN3Q9BRR0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ZKSCAN3Q9BRR0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ZKSCAN3Q9BRR0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
ZKSCAN3Q9BRR0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.6■■■□□ 2.65
ZKSCAN3Q9BRR0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ZKSCAN3Q9BRR0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.59■■■□□ 2.65
ZKSCAN3Q9BRR0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
ZKSCAN3Q9BRR0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.58■■■□□ 2.65
ZKSCAN3Q9BRR0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
ZKSCAN3Q9BRR0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
ZKSCAN3Q9BRR0 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.58■■■□□ 2.65
ZKSCAN3Q9BRR0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
ZKSCAN3Q9BRR0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ZKSCAN3Q9BRR0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.57■■■□□ 2.64
ZKSCAN3Q9BRR0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
ZKSCAN3Q9BRR0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.57■■■□□ 2.64
ZKSCAN3Q9BRR0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.56■■■□□ 2.64
ZKSCAN3Q9BRR0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
ZKSCAN3Q9BRR0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ZKSCAN3Q9BRR0 AL162393.1-201ENST00000437852 946 ntBASIC31.54■■■□□ 2.64
ZKSCAN3Q9BRR0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
ZKSCAN3Q9BRR0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.53■■■□□ 2.64
ZKSCAN3Q9BRR0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
ZKSCAN3Q9BRR0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZKSCAN3Q9BRR0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
ZKSCAN3Q9BRR0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
ZKSCAN3Q9BRR0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZKSCAN3Q9BRR0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZKSCAN3Q9BRR0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZKSCAN3Q9BRR0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZKSCAN3Q9BRR0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZKSCAN3Q9BRR0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms