Protein–RNA interactions for Protein: Q96N87

SLC6A18, Sodium-dependent neutral amino acid transporter B(0)AT3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18Q96N87 AC044849.2-201ENST00000606596 710 ntBASIC27.15■■□□□ 1.94
SLC6A18Q96N87 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SLC6A18Q96N87 ABHD17AP4-201ENST00000411545 909 ntBASIC27.13■■□□□ 1.93
SLC6A18Q96N87 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
SLC6A18Q96N87 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
SLC6A18Q96N87 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SLC6A18Q96N87 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.11■■□□□ 1.93
SLC6A18Q96N87 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SLC6A18Q96N87 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SLC6A18Q96N87 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.1■■□□□ 1.93
SLC6A18Q96N87 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SLC6A18Q96N87 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SLC6A18Q96N87 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SLC6A18Q96N87 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.07■■□□□ 1.92
SLC6A18Q96N87 MIR7108-201ENST00000614319 87 ntBASIC27.07■■□□□ 1.92
SLC6A18Q96N87 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SLC6A18Q96N87 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SLC6A18Q96N87 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.04■■□□□ 1.92
SLC6A18Q96N87 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SLC6A18Q96N87 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SLC6A18Q96N87 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
SLC6A18Q96N87 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27■■□□□ 1.91
SLC6A18Q96N87 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SLC6A18Q96N87 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SLC6A18Q96N87 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SLC6A18Q96N87 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.98■■□□□ 1.91
SLC6A18Q96N87 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SLC6A18Q96N87 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.98■■□□□ 1.91
SLC6A18Q96N87 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
SLC6A18Q96N87 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.98■■□□□ 1.91
SLC6A18Q96N87 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.97■■□□□ 1.91
SLC6A18Q96N87 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
SLC6A18Q96N87 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SLC6A18Q96N87 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.96■■□□□ 1.91
SLC6A18Q96N87 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.96■■□□□ 1.91
SLC6A18Q96N87 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
SLC6A18Q96N87 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SLC6A18Q96N87 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SLC6A18Q96N87 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SLC6A18Q96N87 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.94■■□□□ 1.9
SLC6A18Q96N87 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SLC6A18Q96N87 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.93■■□□□ 1.9
SLC6A18Q96N87 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SLC6A18Q96N87 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SLC6A18Q96N87 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SLC6A18Q96N87 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SLC6A18Q96N87 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.91■■□□□ 1.9
SLC6A18Q96N87 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.91■■□□□ 1.9
SLC6A18Q96N87 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.9■■□□□ 1.9
SLC6A18Q96N87 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.89■■□□□ 1.9
SLC6A18Q96N87 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SLC6A18Q96N87 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
SLC6A18Q96N87 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.88■■□□□ 1.89
SLC6A18Q96N87 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.88■■□□□ 1.89
SLC6A18Q96N87 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
SLC6A18Q96N87 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SLC6A18Q96N87 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SLC6A18Q96N87 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.86■■□□□ 1.89
SLC6A18Q96N87 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SLC6A18Q96N87 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.85■■□□□ 1.89
SLC6A18Q96N87 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SLC6A18Q96N87 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SLC6A18Q96N87 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
SLC6A18Q96N87 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.83■■□□□ 1.89
SLC6A18Q96N87 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SLC6A18Q96N87 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.83■■□□□ 1.89
SLC6A18Q96N87 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
SLC6A18Q96N87 ZNRF2P2-203ENST00000454624 420 ntBASIC26.82■■□□□ 1.88
SLC6A18Q96N87 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
SLC6A18Q96N87 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SLC6A18Q96N87 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.81■■□□□ 1.88
SLC6A18Q96N87 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SLC6A18Q96N87 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SLC6A18Q96N87 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.8■■□□□ 1.88
SLC6A18Q96N87 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SLC6A18Q96N87 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.79■■□□□ 1.88
SLC6A18Q96N87 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SLC6A18Q96N87 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SLC6A18Q96N87 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.78■■□□□ 1.88
SLC6A18Q96N87 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SLC6A18Q96N87 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.78■■□□□ 1.88
SLC6A18Q96N87 HLA-V-202ENST00000446817 847 ntBASIC26.77■■□□□ 1.88
SLC6A18Q96N87 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SLC6A18Q96N87 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.76■■□□□ 1.87
SLC6A18Q96N87 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SLC6A18Q96N87 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.75■■□□□ 1.87
SLC6A18Q96N87 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.74■■□□□ 1.87
SLC6A18Q96N87 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.74■■□□□ 1.87
SLC6A18Q96N87 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SLC6A18Q96N87 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SLC6A18Q96N87 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SLC6A18Q96N87 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SLC6A18Q96N87 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
SLC6A18Q96N87 DUX4L29-201ENST00000425409 679 ntBASIC26.71■■□□□ 1.87
SLC6A18Q96N87 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.71■■□□□ 1.87
SLC6A18Q96N87 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SLC6A18Q96N87 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.7■■□□□ 1.86
SLC6A18Q96N87 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SLC6A18Q96N87 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SLC6A18Q96N87 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms