Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
PHC3Q8NDX5 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PHC3Q8NDX5 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PHC3Q8NDX5 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.93■■□□□ 1.9
PHC3Q8NDX5 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PHC3Q8NDX5 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.91■■□□□ 1.9
PHC3Q8NDX5 AC139426.1-201ENST00000568218 2529 ntBASIC26.9■■□□□ 1.9
PHC3Q8NDX5 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
PHC3Q8NDX5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
PHC3Q8NDX5 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.88■■□□□ 1.89
PHC3Q8NDX5 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PHC3Q8NDX5 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
PHC3Q8NDX5 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.86■■□□□ 1.89
PHC3Q8NDX5 AC097358.2-201ENST00000607541 1159 ntBASIC26.86■■□□□ 1.89
PHC3Q8NDX5 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PHC3Q8NDX5 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.85■■□□□ 1.89
PHC3Q8NDX5 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PHC3Q8NDX5 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PHC3Q8NDX5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PHC3Q8NDX5 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PHC3Q8NDX5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PHC3Q8NDX5 AL133380.1-201ENST00000506013 324 ntBASIC26.82■■□□□ 1.88
PHC3Q8NDX5 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PHC3Q8NDX5 AC136428.2-201ENST00000563187 214 ntBASIC26.8■■□□□ 1.88
PHC3Q8NDX5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.8■■□□□ 1.88
PHC3Q8NDX5 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PHC3Q8NDX5 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.79■■□□□ 1.88
PHC3Q8NDX5 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
PHC3Q8NDX5 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
PHC3Q8NDX5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.78■■□□□ 1.88
PHC3Q8NDX5 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PHC3Q8NDX5 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.76■■□□□ 1.87
PHC3Q8NDX5 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PHC3Q8NDX5 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.75■■□□□ 1.87
PHC3Q8NDX5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
PHC3Q8NDX5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.74■■□□□ 1.87
PHC3Q8NDX5 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PHC3Q8NDX5 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PHC3Q8NDX5 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PHC3Q8NDX5 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
PHC3Q8NDX5 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.7■■□□□ 1.86
PHC3Q8NDX5 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.7■■□□□ 1.86
PHC3Q8NDX5 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PHC3Q8NDX5 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
PHC3Q8NDX5 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.69■■□□□ 1.86
PHC3Q8NDX5 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PHC3Q8NDX5 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
PHC3Q8NDX5 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PHC3Q8NDX5 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PHC3Q8NDX5 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
PHC3Q8NDX5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PHC3Q8NDX5 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.65■■□□□ 1.86
PHC3Q8NDX5 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.65■■□□□ 1.86
PHC3Q8NDX5 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PHC3Q8NDX5 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PHC3Q8NDX5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
PHC3Q8NDX5 CAHM-201ENST00000604200 896 ntBASIC26.64■■□□□ 1.86
PHC3Q8NDX5 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PHC3Q8NDX5 AC120057.4-201ENST00000624722 1615 ntBASIC26.63■■□□□ 1.85
PHC3Q8NDX5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.62■■□□□ 1.85
PHC3Q8NDX5 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PHC3Q8NDX5 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PHC3Q8NDX5 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
PHC3Q8NDX5 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.62■■□□□ 1.85
PHC3Q8NDX5 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
PHC3Q8NDX5 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.6■■□□□ 1.85
PHC3Q8NDX5 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PHC3Q8NDX5 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PHC3Q8NDX5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PHC3Q8NDX5 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PHC3Q8NDX5 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
PHC3Q8NDX5 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PHC3Q8NDX5 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PHC3Q8NDX5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
PHC3Q8NDX5 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
PHC3Q8NDX5 AL391121.1-201ENST00000607967 1349 ntBASIC26.56■■□□□ 1.84
PHC3Q8NDX5 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PHC3Q8NDX5 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PHC3Q8NDX5 SUZ12P1-203ENST00000578195 985 ntBASIC26.54■■□□□ 1.84
PHC3Q8NDX5 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PHC3Q8NDX5 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PHC3Q8NDX5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PHC3Q8NDX5 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PHC3Q8NDX5 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.52■■□□□ 1.84
PHC3Q8NDX5 WASH5P-204ENST00000632292 975 ntBASIC26.52■■□□□ 1.84
PHC3Q8NDX5 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PHC3Q8NDX5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PHC3Q8NDX5 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PHC3Q8NDX5 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PHC3Q8NDX5 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PHC3Q8NDX5 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PHC3Q8NDX5 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PHC3Q8NDX5 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
PHC3Q8NDX5 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.47■■□□□ 1.83
PHC3Q8NDX5 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PHC3Q8NDX5 ABCB10P1-201ENST00000614297 2181 ntBASIC26.47■■□□□ 1.83
PHC3Q8NDX5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
PHC3Q8NDX5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.45■■□□□ 1.82
PHC3Q8NDX5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.45■■□□□ 1.82
PHC3Q8NDX5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms