Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.65■■■□□ 2.5
SLC17A8Q8NDX2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.65■■■□□ 2.5
SLC17A8Q8NDX2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SLC17A8Q8NDX2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SLC17A8Q8NDX2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SLC17A8Q8NDX2 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SLC17A8Q8NDX2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.61■■■□□ 2.49
SLC17A8Q8NDX2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
SLC17A8Q8NDX2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
SLC17A8Q8NDX2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.6■■■□□ 2.49
SLC17A8Q8NDX2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
SLC17A8Q8NDX2 HSD17B1P1-201ENST00000590052 955 ntBASIC30.59■■■□□ 2.49
SLC17A8Q8NDX2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.59■■■□□ 2.49
SLC17A8Q8NDX2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.58■■■□□ 2.49
SLC17A8Q8NDX2 AL391121.1-201ENST00000607967 1349 ntBASIC30.58■■■□□ 2.49
SLC17A8Q8NDX2 AC044849.2-201ENST00000606596 710 ntBASIC30.58■■■□□ 2.49
SLC17A8Q8NDX2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
SLC17A8Q8NDX2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SLC17A8Q8NDX2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.56■■■□□ 2.48
SLC17A8Q8NDX2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
SLC17A8Q8NDX2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.56■■■□□ 2.48
SLC17A8Q8NDX2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SLC17A8Q8NDX2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.55■■■□□ 2.48
SLC17A8Q8NDX2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SLC17A8Q8NDX2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
SLC17A8Q8NDX2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
SLC17A8Q8NDX2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
SLC17A8Q8NDX2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
SLC17A8Q8NDX2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.52■■■□□ 2.48
SLC17A8Q8NDX2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
SLC17A8Q8NDX2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.49■■■□□ 2.47
SLC17A8Q8NDX2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SLC17A8Q8NDX2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SLC17A8Q8NDX2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.47■■■□□ 2.47
SLC17A8Q8NDX2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SLC17A8Q8NDX2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SLC17A8Q8NDX2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SLC17A8Q8NDX2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
SLC17A8Q8NDX2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SLC17A8Q8NDX2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.45■■■□□ 2.47
SLC17A8Q8NDX2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.44■■■□□ 2.46
SLC17A8Q8NDX2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.43■■■□□ 2.46
SLC17A8Q8NDX2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.42■■■□□ 2.46
SLC17A8Q8NDX2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SLC17A8Q8NDX2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SLC17A8Q8NDX2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
SLC17A8Q8NDX2 DUX4L28-201ENST00000623687 678 ntBASIC30.38■■■□□ 2.45
SLC17A8Q8NDX2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
SLC17A8Q8NDX2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC17A8Q8NDX2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC17A8Q8NDX2 MIR639-201ENST00000384974 98 ntBASIC30.36■■■□□ 2.45
SLC17A8Q8NDX2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.36■■■□□ 2.45
SLC17A8Q8NDX2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC17A8Q8NDX2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC17A8Q8NDX2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
SLC17A8Q8NDX2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SLC17A8Q8NDX2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SLC17A8Q8NDX2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SLC17A8Q8NDX2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SLC17A8Q8NDX2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SLC17A8Q8NDX2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.29■■■□□ 2.44
SLC17A8Q8NDX2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.27■■■□□ 2.44
SLC17A8Q8NDX2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
SLC17A8Q8NDX2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
SLC17A8Q8NDX2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SLC17A8Q8NDX2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.24■■■□□ 2.43
SLC17A8Q8NDX2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.24■■■□□ 2.43
SLC17A8Q8NDX2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.23■■■□□ 2.43
SLC17A8Q8NDX2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.22■■■□□ 2.43
SLC17A8Q8NDX2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.22■■■□□ 2.43
SLC17A8Q8NDX2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.21■■■□□ 2.43
SLC17A8Q8NDX2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
SLC17A8Q8NDX2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.21■■■□□ 2.43
SLC17A8Q8NDX2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.2■■■□□ 2.43
SLC17A8Q8NDX2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SLC17A8Q8NDX2 AL133380.1-201ENST00000506013 324 ntBASIC30.19■■■□□ 2.42
SLC17A8Q8NDX2 AC120057.4-201ENST00000624722 1615 ntBASIC30.18■■■□□ 2.42
SLC17A8Q8NDX2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SLC17A8Q8NDX2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SLC17A8Q8NDX2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SLC17A8Q8NDX2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.16■■■□□ 2.42
SLC17A8Q8NDX2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.16■■■□□ 2.42
SLC17A8Q8NDX2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SLC17A8Q8NDX2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.15■■■□□ 2.42
SLC17A8Q8NDX2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SLC17A8Q8NDX2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.14■■■□□ 2.42
SLC17A8Q8NDX2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SLC17A8Q8NDX2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
SLC17A8Q8NDX2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
SLC17A8Q8NDX2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.14■■■□□ 2.42
SLC17A8Q8NDX2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.12■■■□□ 2.41
SLC17A8Q8NDX2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SLC17A8Q8NDX2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SLC17A8Q8NDX2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
SLC17A8Q8NDX2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.11■■■□□ 2.41
SLC17A8Q8NDX2 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.11■■■□□ 2.41
SLC17A8Q8NDX2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SLC17A8Q8NDX2 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.09■■■□□ 2.41
SLC17A8Q8NDX2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SLC17A8Q8NDX2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms