Protein–RNA interactions for Protein: Q8NC96

NECAP1, Adaptin ear-binding coat-associated protein 1, humanhuman

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1Q8NC96 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NECAP1Q8NC96 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NECAP1Q8NC96 AC139426.1-201ENST00000568218 2529 ntBASIC21.71■■□□□ 1.07
NECAP1Q8NC96 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
NECAP1Q8NC96 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
NECAP1Q8NC96 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC21.7■■□□□ 1.06
NECAP1Q8NC96 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
NECAP1Q8NC96 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NECAP1Q8NC96 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.69■■□□□ 1.06
NECAP1Q8NC96 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NECAP1Q8NC96 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NECAP1Q8NC96 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NECAP1Q8NC96 ABCB10P1-201ENST00000614297 2181 ntBASIC21.67■■□□□ 1.06
NECAP1Q8NC96 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NECAP1Q8NC96 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.66■■□□□ 1.06
NECAP1Q8NC96 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.66■■□□□ 1.06
NECAP1Q8NC96 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NECAP1Q8NC96 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
NECAP1Q8NC96 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NECAP1Q8NC96 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.63■■□□□ 1.05
NECAP1Q8NC96 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NECAP1Q8NC96 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.62■■□□□ 1.05
NECAP1Q8NC96 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NECAP1Q8NC96 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.61■■□□□ 1.05
NECAP1Q8NC96 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.61■■□□□ 1.05
NECAP1Q8NC96 ABCB10P3-201ENST00000561950 2166 ntBASIC21.61■■□□□ 1.05
NECAP1Q8NC96 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.61■■□□□ 1.05
NECAP1Q8NC96 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.6■■□□□ 1.05
NECAP1Q8NC96 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
NECAP1Q8NC96 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NECAP1Q8NC96 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NECAP1Q8NC96 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NECAP1Q8NC96 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NECAP1Q8NC96 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.59■■□□□ 1.05
NECAP1Q8NC96 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
NECAP1Q8NC96 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NECAP1Q8NC96 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
NECAP1Q8NC96 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NECAP1Q8NC96 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.56■■□□□ 1.04
NECAP1Q8NC96 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
NECAP1Q8NC96 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NECAP1Q8NC96 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NECAP1Q8NC96 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NECAP1Q8NC96 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NECAP1Q8NC96 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.53■■□□□ 1.04
NECAP1Q8NC96 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
NECAP1Q8NC96 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
NECAP1Q8NC96 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NECAP1Q8NC96 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
NECAP1Q8NC96 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.52■■□□□ 1.04
NECAP1Q8NC96 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.51■■□□□ 1.03
NECAP1Q8NC96 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NECAP1Q8NC96 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NECAP1Q8NC96 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.5■■□□□ 1.03
NECAP1Q8NC96 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NECAP1Q8NC96 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NECAP1Q8NC96 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.48■■□□□ 1.03
NECAP1Q8NC96 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NECAP1Q8NC96 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NECAP1Q8NC96 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NECAP1Q8NC96 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
NECAP1Q8NC96 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NECAP1Q8NC96 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NECAP1Q8NC96 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NECAP1Q8NC96 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.44■■□□□ 1.02
NECAP1Q8NC96 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NECAP1Q8NC96 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.44■■□□□ 1.02
NECAP1Q8NC96 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NECAP1Q8NC96 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.43■■□□□ 1.02
NECAP1Q8NC96 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.43■■□□□ 1.02
NECAP1Q8NC96 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NECAP1Q8NC96 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NECAP1Q8NC96 AC120057.4-201ENST00000624722 1615 ntBASIC21.43■■□□□ 1.02
NECAP1Q8NC96 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.43■■□□□ 1.02
NECAP1Q8NC96 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NECAP1Q8NC96 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NECAP1Q8NC96 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NECAP1Q8NC96 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.41■■□□□ 1.02
NECAP1Q8NC96 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NECAP1Q8NC96 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
NECAP1Q8NC96 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
NECAP1Q8NC96 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
NECAP1Q8NC96 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
NECAP1Q8NC96 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.39■■□□□ 1.01
NECAP1Q8NC96 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NECAP1Q8NC96 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NECAP1Q8NC96 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.35■■□□□ 1.01
NECAP1Q8NC96 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
NECAP1Q8NC96 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NECAP1Q8NC96 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NECAP1Q8NC96 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NECAP1Q8NC96 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NECAP1Q8NC96 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NECAP1Q8NC96 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.33■■□□□ 1
NECAP1Q8NC96 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NECAP1Q8NC96 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NECAP1Q8NC96 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
NECAP1Q8NC96 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
NECAP1Q8NC96 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NECAP1Q8NC96 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms