Protein–RNA interactions for Protein: Q8N9B8

RASGEF1A, Ras-GEF domain-containing family member 1A, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1AQ8N9B8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RASGEF1AQ8N9B8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RASGEF1AQ8N9B8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
RASGEF1AQ8N9B8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RASGEF1AQ8N9B8 SUZ12P1-203ENST00000578195 985 ntBASIC26.84■■□□□ 1.89
RASGEF1AQ8N9B8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RASGEF1AQ8N9B8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RASGEF1AQ8N9B8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RASGEF1AQ8N9B8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
RASGEF1AQ8N9B8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.82■■□□□ 1.88
RASGEF1AQ8N9B8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RASGEF1AQ8N9B8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RASGEF1AQ8N9B8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RASGEF1AQ8N9B8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RASGEF1AQ8N9B8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.78■■□□□ 1.88
RASGEF1AQ8N9B8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
RASGEF1AQ8N9B8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
RASGEF1AQ8N9B8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RASGEF1AQ8N9B8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RASGEF1AQ8N9B8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.76■■□□□ 1.87
RASGEF1AQ8N9B8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
RASGEF1AQ8N9B8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RASGEF1AQ8N9B8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
RASGEF1AQ8N9B8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
RASGEF1AQ8N9B8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RASGEF1AQ8N9B8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.74■■□□□ 1.87
RASGEF1AQ8N9B8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
RASGEF1AQ8N9B8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
RASGEF1AQ8N9B8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RASGEF1AQ8N9B8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RASGEF1AQ8N9B8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
RASGEF1AQ8N9B8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
RASGEF1AQ8N9B8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.7■■□□□ 1.86
RASGEF1AQ8N9B8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
RASGEF1AQ8N9B8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.69■■□□□ 1.86
RASGEF1AQ8N9B8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.69■■□□□ 1.86
RASGEF1AQ8N9B8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.68■■□□□ 1.86
RASGEF1AQ8N9B8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RASGEF1AQ8N9B8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RASGEF1AQ8N9B8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RASGEF1AQ8N9B8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RASGEF1AQ8N9B8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
RASGEF1AQ8N9B8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
RASGEF1AQ8N9B8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RASGEF1AQ8N9B8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RASGEF1AQ8N9B8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RASGEF1AQ8N9B8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RASGEF1AQ8N9B8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RASGEF1AQ8N9B8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
RASGEF1AQ8N9B8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.57■■□□□ 1.84
RASGEF1AQ8N9B8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
RASGEF1AQ8N9B8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
RASGEF1AQ8N9B8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RASGEF1AQ8N9B8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RASGEF1AQ8N9B8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.54■■□□□ 1.84
RASGEF1AQ8N9B8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RASGEF1AQ8N9B8 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RASGEF1AQ8N9B8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RASGEF1AQ8N9B8 AL161658.1-201ENST00000623641 1967 ntBASIC26.51■■□□□ 1.83
RASGEF1AQ8N9B8 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
RASGEF1AQ8N9B8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RASGEF1AQ8N9B8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RASGEF1AQ8N9B8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.5■■□□□ 1.83
RASGEF1AQ8N9B8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.49■■□□□ 1.83
RASGEF1AQ8N9B8 MIR762-201ENST00000390236 83 ntBASIC26.49■■□□□ 1.83
RASGEF1AQ8N9B8 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.49■■□□□ 1.83
RASGEF1AQ8N9B8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RASGEF1AQ8N9B8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RASGEF1AQ8N9B8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RASGEF1AQ8N9B8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
RASGEF1AQ8N9B8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RASGEF1AQ8N9B8 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.46■■□□□ 1.83
RASGEF1AQ8N9B8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
RASGEF1AQ8N9B8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RASGEF1AQ8N9B8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RASGEF1AQ8N9B8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.46■■□□□ 1.83
RASGEF1AQ8N9B8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
RASGEF1AQ8N9B8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RASGEF1AQ8N9B8 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.45■■□□□ 1.82
RASGEF1AQ8N9B8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
RASGEF1AQ8N9B8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.44■■□□□ 1.82
RASGEF1AQ8N9B8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.44■■□□□ 1.82
RASGEF1AQ8N9B8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
RASGEF1AQ8N9B8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RASGEF1AQ8N9B8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RASGEF1AQ8N9B8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RASGEF1AQ8N9B8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.42■■□□□ 1.82
RASGEF1AQ8N9B8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RASGEF1AQ8N9B8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RASGEF1AQ8N9B8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RASGEF1AQ8N9B8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RASGEF1AQ8N9B8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.41■■□□□ 1.82
RASGEF1AQ8N9B8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RASGEF1AQ8N9B8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
RASGEF1AQ8N9B8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RASGEF1AQ8N9B8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.39■■□□□ 1.82
RASGEF1AQ8N9B8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RASGEF1AQ8N9B8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RASGEF1AQ8N9B8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RASGEF1AQ8N9B8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.38■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms