Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
TTC9BQ8N6N2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
TTC9BQ8N6N2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
TTC9BQ8N6N2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.83■■■□□ 2.21
TTC9BQ8N6N2 DUX4L28-201ENST00000623687 678 ntBASIC28.83■■■□□ 2.21
TTC9BQ8N6N2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
TTC9BQ8N6N2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.81■■■□□ 2.2
TTC9BQ8N6N2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
TTC9BQ8N6N2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
TTC9BQ8N6N2 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.81■■■□□ 2.2
TTC9BQ8N6N2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
TTC9BQ8N6N2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.8■■■□□ 2.2
TTC9BQ8N6N2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.8■■■□□ 2.2
TTC9BQ8N6N2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.8■■■□□ 2.2
TTC9BQ8N6N2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
TTC9BQ8N6N2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC28.8■■■□□ 2.2
TTC9BQ8N6N2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
TTC9BQ8N6N2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
TTC9BQ8N6N2 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
TTC9BQ8N6N2 MIR3665-201ENST00000578708 105 ntBASIC28.77■■■□□ 2.2
TTC9BQ8N6N2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.77■■■□□ 2.2
TTC9BQ8N6N2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
TTC9BQ8N6N2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
TTC9BQ8N6N2 AC087741.3-201ENST00000624270 1347 ntBASIC28.73■■■□□ 2.19
TTC9BQ8N6N2 AC005559.1-201ENST00000589661 871 ntBASIC28.73■■■□□ 2.19
TTC9BQ8N6N2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
TTC9BQ8N6N2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
TTC9BQ8N6N2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.72■■■□□ 2.19
TTC9BQ8N6N2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
TTC9BQ8N6N2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.18
TTC9BQ8N6N2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
TTC9BQ8N6N2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
TTC9BQ8N6N2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
TTC9BQ8N6N2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
TTC9BQ8N6N2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
TTC9BQ8N6N2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
TTC9BQ8N6N2 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TTC9BQ8N6N2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TTC9BQ8N6N2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
TTC9BQ8N6N2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
TTC9BQ8N6N2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
TTC9BQ8N6N2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.62■■■□□ 2.17
TTC9BQ8N6N2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TTC9BQ8N6N2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.61■■■□□ 2.17
TTC9BQ8N6N2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.6■■■□□ 2.17
TTC9BQ8N6N2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.6■■■□□ 2.17
TTC9BQ8N6N2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
TTC9BQ8N6N2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
TTC9BQ8N6N2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.59■■■□□ 2.17
TTC9BQ8N6N2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
TTC9BQ8N6N2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TTC9BQ8N6N2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.57■■■□□ 2.16
TTC9BQ8N6N2 AC120057.4-201ENST00000624722 1615 ntBASIC28.57■■■□□ 2.16
TTC9BQ8N6N2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.56■■■□□ 2.16
TTC9BQ8N6N2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TTC9BQ8N6N2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
TTC9BQ8N6N2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
TTC9BQ8N6N2 AC044849.2-201ENST00000606596 710 ntBASIC28.53■■■□□ 2.16
TTC9BQ8N6N2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TTC9BQ8N6N2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.52■■■□□ 2.16
TTC9BQ8N6N2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
TTC9BQ8N6N2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
TTC9BQ8N6N2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TTC9BQ8N6N2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
TTC9BQ8N6N2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
TTC9BQ8N6N2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
TTC9BQ8N6N2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
TTC9BQ8N6N2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.46■■■□□ 2.15
TTC9BQ8N6N2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
TTC9BQ8N6N2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.45■■■□□ 2.14
TTC9BQ8N6N2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.45■■■□□ 2.14
TTC9BQ8N6N2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.45■■■□□ 2.14
TTC9BQ8N6N2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
TTC9BQ8N6N2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TTC9BQ8N6N2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
TTC9BQ8N6N2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TTC9BQ8N6N2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TTC9BQ8N6N2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC28.42■■■□□ 2.14
TTC9BQ8N6N2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.41■■■□□ 2.14
TTC9BQ8N6N2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
TTC9BQ8N6N2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TTC9BQ8N6N2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TTC9BQ8N6N2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
TTC9BQ8N6N2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.41■■■□□ 2.14
TTC9BQ8N6N2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
TTC9BQ8N6N2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TTC9BQ8N6N2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TTC9BQ8N6N2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TTC9BQ8N6N2 ABHD17AP4-201ENST00000411545 909 ntBASIC28.39■■■□□ 2.14
TTC9BQ8N6N2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
TTC9BQ8N6N2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TTC9BQ8N6N2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
TTC9BQ8N6N2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TTC9BQ8N6N2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.37■■■□□ 2.13
TTC9BQ8N6N2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TTC9BQ8N6N2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TTC9BQ8N6N2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TTC9BQ8N6N2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
TTC9BQ8N6N2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.36■■■□□ 2.13
TTC9BQ8N6N2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms