Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.63■■□□□ 1.69
SLC44A2Q8IWA5 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
SLC44A2Q8IWA5 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SLC44A2Q8IWA5 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SLC44A2Q8IWA5 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SLC44A2Q8IWA5 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.6■■□□□ 1.69
SLC44A2Q8IWA5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.6■■□□□ 1.69
SLC44A2Q8IWA5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.59■■□□□ 1.69
SLC44A2Q8IWA5 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
SLC44A2Q8IWA5 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
SLC44A2Q8IWA5 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
SLC44A2Q8IWA5 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SLC44A2Q8IWA5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.55■■□□□ 1.68
SLC44A2Q8IWA5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SLC44A2Q8IWA5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.54■■□□□ 1.68
SLC44A2Q8IWA5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.53■■□□□ 1.68
SLC44A2Q8IWA5 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.51■■□□□ 1.67
SLC44A2Q8IWA5 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC44A2Q8IWA5 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SLC44A2Q8IWA5 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SLC44A2Q8IWA5 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC44A2Q8IWA5 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC44A2Q8IWA5 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC44A2Q8IWA5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC44A2Q8IWA5 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.46■■□□□ 1.67
SLC44A2Q8IWA5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.45■■□□□ 1.66
SLC44A2Q8IWA5 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SLC44A2Q8IWA5 RARRES2P7-201ENST00000567349 469 ntBASIC25.44■■□□□ 1.66
SLC44A2Q8IWA5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SLC44A2Q8IWA5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SLC44A2Q8IWA5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SLC44A2Q8IWA5 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.43■■□□□ 1.66
SLC44A2Q8IWA5 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.42■■□□□ 1.66
SLC44A2Q8IWA5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.41■■□□□ 1.66
SLC44A2Q8IWA5 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SLC44A2Q8IWA5 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SLC44A2Q8IWA5 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.4■■□□□ 1.66
SLC44A2Q8IWA5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SLC44A2Q8IWA5 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SLC44A2Q8IWA5 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.38■■□□□ 1.65
SLC44A2Q8IWA5 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SLC44A2Q8IWA5 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SLC44A2Q8IWA5 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SLC44A2Q8IWA5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SLC44A2Q8IWA5 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SLC44A2Q8IWA5 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SLC44A2Q8IWA5 ABCB10P1-201ENST00000614297 2181 ntBASIC25.33■■□□□ 1.65
SLC44A2Q8IWA5 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SLC44A2Q8IWA5 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SLC44A2Q8IWA5 SETD8P1-201ENST00000623146 1180 ntBASIC25.3■■□□□ 1.64
SLC44A2Q8IWA5 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
SLC44A2Q8IWA5 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SLC44A2Q8IWA5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
SLC44A2Q8IWA5 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.29■■□□□ 1.64
SLC44A2Q8IWA5 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SLC44A2Q8IWA5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.29■■□□□ 1.64
SLC44A2Q8IWA5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SLC44A2Q8IWA5 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.28■■□□□ 1.64
SLC44A2Q8IWA5 AL133380.1-201ENST00000506013 324 ntBASIC25.28■■□□□ 1.64
SLC44A2Q8IWA5 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SLC44A2Q8IWA5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.26■■□□□ 1.63
SLC44A2Q8IWA5 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
SLC44A2Q8IWA5 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SLC44A2Q8IWA5 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SLC44A2Q8IWA5 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SLC44A2Q8IWA5 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
SLC44A2Q8IWA5 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
SLC44A2Q8IWA5 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.21■■□□□ 1.63
SLC44A2Q8IWA5 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SLC44A2Q8IWA5 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SLC44A2Q8IWA5 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SLC44A2Q8IWA5 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
SLC44A2Q8IWA5 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SLC44A2Q8IWA5 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.18■■□□□ 1.62
SLC44A2Q8IWA5 AL161658.1-201ENST00000623641 1967 ntBASIC25.17■■□□□ 1.62
SLC44A2Q8IWA5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SLC44A2Q8IWA5 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SLC44A2Q8IWA5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
SLC44A2Q8IWA5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
SLC44A2Q8IWA5 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SLC44A2Q8IWA5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.14■■□□□ 1.61
SLC44A2Q8IWA5 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.13■■□□□ 1.61
SLC44A2Q8IWA5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SLC44A2Q8IWA5 AC097358.2-201ENST00000607541 1159 ntBASIC25.13■■□□□ 1.61
SLC44A2Q8IWA5 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
SLC44A2Q8IWA5 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.12■■□□□ 1.61
SLC44A2Q8IWA5 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SLC44A2Q8IWA5 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SLC44A2Q8IWA5 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SLC44A2Q8IWA5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC44A2Q8IWA5 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.11■■□□□ 1.61
SLC44A2Q8IWA5 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC44A2Q8IWA5 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SLC44A2Q8IWA5 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC44A2Q8IWA5 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SLC44A2Q8IWA5 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SLC44A2Q8IWA5 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SLC44A2Q8IWA5 WASH5P-204ENST00000632292 975 ntBASIC25.1■■□□□ 1.61
SLC44A2Q8IWA5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
SLC44A2Q8IWA5 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms