Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFE4Q86UQ8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFE4Q86UQ8 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFE4Q86UQ8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.2■□□□□ 0.66
NFE4Q86UQ8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.2■□□□□ 0.66
NFE4Q86UQ8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.2■□□□□ 0.66
NFE4Q86UQ8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NFE4Q86UQ8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFE4Q86UQ8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFE4Q86UQ8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
NFE4Q86UQ8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFE4Q86UQ8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NFE4Q86UQ8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFE4Q86UQ8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFE4Q86UQ8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NFE4Q86UQ8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.16■□□□□ 0.66
NFE4Q86UQ8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.16■□□□□ 0.66
NFE4Q86UQ8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFE4Q86UQ8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.15■□□□□ 0.66
NFE4Q86UQ8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.15■□□□□ 0.66
NFE4Q86UQ8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NFE4Q86UQ8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NFE4Q86UQ8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.14■□□□□ 0.65
NFE4Q86UQ8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.13■□□□□ 0.65
NFE4Q86UQ8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
NFE4Q86UQ8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.13■□□□□ 0.65
NFE4Q86UQ8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFE4Q86UQ8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFE4Q86UQ8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFE4Q86UQ8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NFE4Q86UQ8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.1■□□□□ 0.65
NFE4Q86UQ8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFE4Q86UQ8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.09■□□□□ 0.65
NFE4Q86UQ8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFE4Q86UQ8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.09■□□□□ 0.65
NFE4Q86UQ8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NFE4Q86UQ8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
NFE4Q86UQ8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.08■□□□□ 0.64
NFE4Q86UQ8 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NFE4Q86UQ8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
NFE4Q86UQ8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
NFE4Q86UQ8 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.07■□□□□ 0.64
NFE4Q86UQ8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.07■□□□□ 0.64
NFE4Q86UQ8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NFE4Q86UQ8 AC120057.4-201ENST00000624722 1615 ntBASIC19.06■□□□□ 0.64
NFE4Q86UQ8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NFE4Q86UQ8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
NFE4Q86UQ8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NFE4Q86UQ8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NFE4Q86UQ8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFE4Q86UQ8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFE4Q86UQ8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFE4Q86UQ8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFE4Q86UQ8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NFE4Q86UQ8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
NFE4Q86UQ8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NFE4Q86UQ8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NFE4Q86UQ8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
NFE4Q86UQ8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NFE4Q86UQ8 RARRES2P7-201ENST00000567349 469 ntBASIC19■□□□□ 0.63
NFE4Q86UQ8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NFE4Q86UQ8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NFE4Q86UQ8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NFE4Q86UQ8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NFE4Q86UQ8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
NFE4Q86UQ8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NFE4Q86UQ8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.96■□□□□ 0.63
NFE4Q86UQ8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NFE4Q86UQ8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC18.94■□□□□ 0.62
NFE4Q86UQ8 AC135731.1-201ENST00000569415 2548 ntBASIC18.94■□□□□ 0.62
NFE4Q86UQ8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
NFE4Q86UQ8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.94■□□□□ 0.62
NFE4Q86UQ8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
NFE4Q86UQ8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.93■□□□□ 0.62
NFE4Q86UQ8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NFE4Q86UQ8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NFE4Q86UQ8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.91■□□□□ 0.62
NFE4Q86UQ8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NFE4Q86UQ8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NFE4Q86UQ8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NFE4Q86UQ8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NFE4Q86UQ8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NFE4Q86UQ8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NFE4Q86UQ8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NFE4Q86UQ8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
NFE4Q86UQ8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NFE4Q86UQ8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
NFE4Q86UQ8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC18.88■□□□□ 0.61
NFE4Q86UQ8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFE4Q86UQ8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
NFE4Q86UQ8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NFE4Q86UQ8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NFE4Q86UQ8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.87■□□□□ 0.61
NFE4Q86UQ8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NFE4Q86UQ8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC18.86■□□□□ 0.61
NFE4Q86UQ8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFE4Q86UQ8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NFE4Q86UQ8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC18.84■□□□□ 0.61
NFE4Q86UQ8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFE4Q86UQ8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms