Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS13BQ7Z7G8 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS13BQ7Z7G8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS13BQ7Z7G8 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS13BQ7Z7G8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS13BQ7Z7G8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS13BQ7Z7G8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VPS13BQ7Z7G8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VPS13BQ7Z7G8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC17.13■□□□□ 0.33
VPS13BQ7Z7G8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC17.13■□□□□ 0.33
VPS13BQ7Z7G8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17.12■□□□□ 0.33
VPS13BQ7Z7G8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.12■□□□□ 0.33
VPS13BQ7Z7G8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS13BQ7Z7G8 ZNRF2P2-203ENST00000454624 420 ntBASIC17.12■□□□□ 0.33
VPS13BQ7Z7G8 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
VPS13BQ7Z7G8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VPS13BQ7Z7G8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VPS13BQ7Z7G8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC17.11■□□□□ 0.33
VPS13BQ7Z7G8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.11■□□□□ 0.33
VPS13BQ7Z7G8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.1■□□□□ 0.33
VPS13BQ7Z7G8 MIR639-201ENST00000384974 98 ntBASIC17.1■□□□□ 0.33
VPS13BQ7Z7G8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC17.1■□□□□ 0.33
VPS13BQ7Z7G8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS13BQ7Z7G8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
VPS13BQ7Z7G8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
VPS13BQ7Z7G8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS13BQ7Z7G8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC17.09■□□□□ 0.33
VPS13BQ7Z7G8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS13BQ7Z7G8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS13BQ7Z7G8 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS13BQ7Z7G8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.08■□□□□ 0.33
VPS13BQ7Z7G8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC17.08■□□□□ 0.32
VPS13BQ7Z7G8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS13BQ7Z7G8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS13BQ7Z7G8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS13BQ7Z7G8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS13BQ7Z7G8 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VPS13BQ7Z7G8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VPS13BQ7Z7G8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VPS13BQ7Z7G8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.06■□□□□ 0.32
VPS13BQ7Z7G8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
VPS13BQ7Z7G8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS13BQ7Z7G8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
VPS13BQ7Z7G8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
VPS13BQ7Z7G8 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS13BQ7Z7G8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
VPS13BQ7Z7G8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.04■□□□□ 0.32
VPS13BQ7Z7G8 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VPS13BQ7Z7G8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS13BQ7Z7G8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
VPS13BQ7Z7G8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS13BQ7Z7G8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.03■□□□□ 0.32
VPS13BQ7Z7G8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS13BQ7Z7G8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS13BQ7Z7G8 MIR3648-2-201ENST00000581792 180 ntBASIC17.02■□□□□ 0.31
VPS13BQ7Z7G8 MIR3648-1-201ENST00000615959 180 ntBASIC17.02■□□□□ 0.31
VPS13BQ7Z7G8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS13BQ7Z7G8 AC021231.2-201ENST00000594613 730 ntBASIC17.01■□□□□ 0.31
VPS13BQ7Z7G8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VPS13BQ7Z7G8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17■□□□□ 0.31
VPS13BQ7Z7G8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS13BQ7Z7G8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VPS13BQ7Z7G8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC16.99■□□□□ 0.31
VPS13BQ7Z7G8 CR559946.2-201ENST00000623684 991 ntBASIC16.99■□□□□ 0.31
VPS13BQ7Z7G8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS13BQ7Z7G8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC16.99■□□□□ 0.31
VPS13BQ7Z7G8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS13BQ7Z7G8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC16.98■□□□□ 0.31
VPS13BQ7Z7G8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.98■□□□□ 0.31
VPS13BQ7Z7G8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
VPS13BQ7Z7G8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VPS13BQ7Z7G8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS13BQ7Z7G8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS13BQ7Z7G8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC16.96■□□□□ 0.31
VPS13BQ7Z7G8 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS13BQ7Z7G8 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
VPS13BQ7Z7G8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
VPS13BQ7Z7G8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS13BQ7Z7G8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC16.94■□□□□ 0.3
VPS13BQ7Z7G8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VPS13BQ7Z7G8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.93■□□□□ 0.3
VPS13BQ7Z7G8 AC016575.1-201ENST00000607026 382 ntBASIC16.93■□□□□ 0.3
VPS13BQ7Z7G8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VPS13BQ7Z7G8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VPS13BQ7Z7G8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC16.92■□□□□ 0.3
VPS13BQ7Z7G8 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VPS13BQ7Z7G8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC16.92■□□□□ 0.3
VPS13BQ7Z7G8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
VPS13BQ7Z7G8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS13BQ7Z7G8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS13BQ7Z7G8 DUX4L29-201ENST00000425409 679 ntBASIC16.89■□□□□ 0.29
VPS13BQ7Z7G8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS13BQ7Z7G8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC16.87■□□□□ 0.29
VPS13BQ7Z7G8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC16.87■□□□□ 0.29
VPS13BQ7Z7G8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC16.86■□□□□ 0.29
VPS13BQ7Z7G8 WASH5P-204ENST00000632292 975 ntBASIC16.86■□□□□ 0.29
VPS13BQ7Z7G8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VPS13BQ7Z7G8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS13BQ7Z7G8 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS13BQ7Z7G8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms