Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RAPH1Q70E73 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
RAPH1Q70E73 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
RAPH1Q70E73 AL031258.1-201ENST00000623562 325 ntBASIC27.06■■□□□ 1.92
RAPH1Q70E73 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
RAPH1Q70E73 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
RAPH1Q70E73 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.05■■□□□ 1.92
RAPH1Q70E73 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RAPH1Q70E73 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RAPH1Q70E73 ABCB10P1-201ENST00000614297 2181 ntBASIC27.04■■□□□ 1.92
RAPH1Q70E73 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RAPH1Q70E73 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RAPH1Q70E73 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RAPH1Q70E73 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RAPH1Q70E73 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27■■□□□ 1.91
RAPH1Q70E73 AP002365.1-201ENST00000603448 772 ntBASIC27■■□□□ 1.91
RAPH1Q70E73 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27■■□□□ 1.91
RAPH1Q70E73 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27■■□□□ 1.91
RAPH1Q70E73 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.98■■□□□ 1.91
RAPH1Q70E73 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RAPH1Q70E73 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.97■■□□□ 1.91
RAPH1Q70E73 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RAPH1Q70E73 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.96■■□□□ 1.91
RAPH1Q70E73 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.95■■□□□ 1.9
RAPH1Q70E73 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RAPH1Q70E73 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.93■■□□□ 1.9
RAPH1Q70E73 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
RAPH1Q70E73 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RAPH1Q70E73 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RAPH1Q70E73 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
RAPH1Q70E73 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RAPH1Q70E73 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
RAPH1Q70E73 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.87■■□□□ 1.89
RAPH1Q70E73 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RAPH1Q70E73 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RAPH1Q70E73 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RAPH1Q70E73 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.85■■□□□ 1.89
RAPH1Q70E73 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RAPH1Q70E73 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RAPH1Q70E73 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.85■■□□□ 1.89
RAPH1Q70E73 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
RAPH1Q70E73 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RAPH1Q70E73 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
RAPH1Q70E73 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.83■■□□□ 1.89
RAPH1Q70E73 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.83■■□□□ 1.89
RAPH1Q70E73 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.83■■□□□ 1.88
RAPH1Q70E73 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
RAPH1Q70E73 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
RAPH1Q70E73 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
RAPH1Q70E73 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RAPH1Q70E73 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RAPH1Q70E73 AL161658.1-201ENST00000623641 1967 ntBASIC26.78■■□□□ 1.88
RAPH1Q70E73 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
RAPH1Q70E73 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
RAPH1Q70E73 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RAPH1Q70E73 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.77■■□□□ 1.88
RAPH1Q70E73 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.77■■□□□ 1.88
RAPH1Q70E73 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
RAPH1Q70E73 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.77■■□□□ 1.88
RAPH1Q70E73 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RAPH1Q70E73 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RAPH1Q70E73 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RAPH1Q70E73 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
RAPH1Q70E73 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RAPH1Q70E73 ABCB10P3-201ENST00000561950 2166 ntBASIC26.75■■□□□ 1.87
RAPH1Q70E73 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
RAPH1Q70E73 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.74■■□□□ 1.87
RAPH1Q70E73 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RAPH1Q70E73 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RAPH1Q70E73 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RAPH1Q70E73 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
RAPH1Q70E73 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.73■■□□□ 1.87
RAPH1Q70E73 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RAPH1Q70E73 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.72■■□□□ 1.87
RAPH1Q70E73 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RAPH1Q70E73 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RAPH1Q70E73 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.72■■□□□ 1.87
RAPH1Q70E73 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RAPH1Q70E73 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RAPH1Q70E73 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RAPH1Q70E73 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
RAPH1Q70E73 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.7■■□□□ 1.86
RAPH1Q70E73 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.68■■□□□ 1.86
RAPH1Q70E73 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.68■■□□□ 1.86
RAPH1Q70E73 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
RAPH1Q70E73 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
RAPH1Q70E73 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RAPH1Q70E73 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.66■■□□□ 1.86
RAPH1Q70E73 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.65■■□□□ 1.86
RAPH1Q70E73 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RAPH1Q70E73 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
RAPH1Q70E73 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.64■■□□□ 1.85
RAPH1Q70E73 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
RAPH1Q70E73 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RAPH1Q70E73 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RAPH1Q70E73 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
RAPH1Q70E73 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
RAPH1Q70E73 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RAPH1Q70E73 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RAPH1Q70E73 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms