Protein–RNA interactions for Protein: Q6ZSC3

RBM43, RNA-binding protein 43, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM43Q6ZSC3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
RBM43Q6ZSC3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.71■■■□□ 2.51
RBM43Q6ZSC3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
RBM43Q6ZSC3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
RBM43Q6ZSC3 AC006077.2-201ENST00000623591 457 ntBASIC30.69■■■□□ 2.5
RBM43Q6ZSC3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
RBM43Q6ZSC3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
RBM43Q6ZSC3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
RBM43Q6ZSC3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.67■■■□□ 2.5
RBM43Q6ZSC3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
RBM43Q6ZSC3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
RBM43Q6ZSC3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RBM43Q6ZSC3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.64■■■□□ 2.5
RBM43Q6ZSC3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
RBM43Q6ZSC3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
RBM43Q6ZSC3 AC139426.1-201ENST00000568218 2529 ntBASIC30.63■■■□□ 2.49
RBM43Q6ZSC3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RBM43Q6ZSC3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RBM43Q6ZSC3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.62■■■□□ 2.49
RBM43Q6ZSC3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.61■■■□□ 2.49
RBM43Q6ZSC3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
RBM43Q6ZSC3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RBM43Q6ZSC3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.59■■■□□ 2.49
RBM43Q6ZSC3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
RBM43Q6ZSC3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.58■■■□□ 2.49
RBM43Q6ZSC3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
RBM43Q6ZSC3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.58■■■□□ 2.49
RBM43Q6ZSC3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
RBM43Q6ZSC3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
RBM43Q6ZSC3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
RBM43Q6ZSC3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.56■■■□□ 2.48
RBM43Q6ZSC3 ST7-AS1-201ENST00000456775 1889 ntBASIC30.56■■■□□ 2.48
RBM43Q6ZSC3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RBM43Q6ZSC3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RBM43Q6ZSC3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
RBM43Q6ZSC3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
RBM43Q6ZSC3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
RBM43Q6ZSC3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.54■■■□□ 2.48
RBM43Q6ZSC3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RBM43Q6ZSC3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RBM43Q6ZSC3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
RBM43Q6ZSC3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.48
RBM43Q6ZSC3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.51■■■□□ 2.48
RBM43Q6ZSC3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.49■■■□□ 2.47
RBM43Q6ZSC3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
RBM43Q6ZSC3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
RBM43Q6ZSC3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.48■■■□□ 2.47
RBM43Q6ZSC3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
RBM43Q6ZSC3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
RBM43Q6ZSC3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.46
RBM43Q6ZSC3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.43■■■□□ 2.46
RBM43Q6ZSC3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
RBM43Q6ZSC3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RBM43Q6ZSC3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
RBM43Q6ZSC3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RBM43Q6ZSC3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RBM43Q6ZSC3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RBM43Q6ZSC3 AL161658.1-201ENST00000623641 1967 ntBASIC30.41■■■□□ 2.46
RBM43Q6ZSC3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
RBM43Q6ZSC3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
RBM43Q6ZSC3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RBM43Q6ZSC3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RBM43Q6ZSC3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
RBM43Q6ZSC3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
RBM43Q6ZSC3 ZNRF2P1-201ENST00000441407 443 ntBASIC30.36■■■□□ 2.45
RBM43Q6ZSC3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
RBM43Q6ZSC3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
RBM43Q6ZSC3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
RBM43Q6ZSC3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.33■■■□□ 2.45
RBM43Q6ZSC3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
RBM43Q6ZSC3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
RBM43Q6ZSC3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
RBM43Q6ZSC3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RBM43Q6ZSC3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
RBM43Q6ZSC3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RBM43Q6ZSC3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
RBM43Q6ZSC3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.28■■■□□ 2.44
RBM43Q6ZSC3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
RBM43Q6ZSC3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.27■■■□□ 2.44
RBM43Q6ZSC3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
RBM43Q6ZSC3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
RBM43Q6ZSC3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.25■■■□□ 2.43
RBM43Q6ZSC3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
RBM43Q6ZSC3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RBM43Q6ZSC3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RBM43Q6ZSC3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RBM43Q6ZSC3 DYNLL1-208ENST00000550178 581 ntBASIC30.24■■■□□ 2.43
RBM43Q6ZSC3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RBM43Q6ZSC3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RBM43Q6ZSC3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
RBM43Q6ZSC3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.21■■■□□ 2.43
RBM43Q6ZSC3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
RBM43Q6ZSC3 AL135925.1-201ENST00000605920 1701 ntBASIC30.2■■■□□ 2.43
RBM43Q6ZSC3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
RBM43Q6ZSC3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.19■■■□□ 2.42
RBM43Q6ZSC3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
RBM43Q6ZSC3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.18■■■□□ 2.42
RBM43Q6ZSC3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RBM43Q6ZSC3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RBM43Q6ZSC3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms