Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC39.96■■■■□ 3.99
SPHKAPQ2M3C7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC39.94■■■■□ 3.98
SPHKAPQ2M3C7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC39.94■■■■□ 3.98
SPHKAPQ2M3C7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC39.91■■■■□ 3.98
SPHKAPQ2M3C7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC39.91■■■■□ 3.98
SPHKAPQ2M3C7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.98
SPHKAPQ2M3C7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC39.9■■■■□ 3.98
SPHKAPQ2M3C7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC39.89■■■■□ 3.98
SPHKAPQ2M3C7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
SPHKAPQ2M3C7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
SPHKAPQ2M3C7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC39.89■■■■□ 3.98
SPHKAPQ2M3C7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC39.89■■■■□ 3.98
SPHKAPQ2M3C7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.98
SPHKAPQ2M3C7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC39.88■■■■□ 3.98
SPHKAPQ2M3C7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC39.87■■■■□ 3.97
SPHKAPQ2M3C7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC39.83■■■■□ 3.97
SPHKAPQ2M3C7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.97
SPHKAPQ2M3C7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC39.82■■■■□ 3.97
SPHKAPQ2M3C7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC39.79■■■■□ 3.96
SPHKAPQ2M3C7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC39.79■■■■□ 3.96
SPHKAPQ2M3C7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC39.79■■■■□ 3.96
SPHKAPQ2M3C7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC39.76■■■■□ 3.96
SPHKAPQ2M3C7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.96
SPHKAPQ2M3C7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
SPHKAPQ2M3C7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
SPHKAPQ2M3C7 MIR7108-201ENST00000614319 87 ntBASIC39.74■■■■□ 3.95
SPHKAPQ2M3C7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
SPHKAPQ2M3C7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
SPHKAPQ2M3C7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
SPHKAPQ2M3C7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
SPHKAPQ2M3C7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC39.71■■■■□ 3.95
SPHKAPQ2M3C7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC39.7■■■■□ 3.95
SPHKAPQ2M3C7 ABHD17AP4-201ENST00000411545 909 ntBASIC39.7■■■■□ 3.95
SPHKAPQ2M3C7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC39.7■■■■□ 3.95
SPHKAPQ2M3C7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC39.7■■■■□ 3.95
SPHKAPQ2M3C7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC39.69■■■■□ 3.94
SPHKAPQ2M3C7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC39.68■■■■□ 3.94
SPHKAPQ2M3C7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC39.68■■■■□ 3.94
SPHKAPQ2M3C7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
SPHKAPQ2M3C7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC39.66■■■■□ 3.94
SPHKAPQ2M3C7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC39.66■■■■□ 3.94
SPHKAPQ2M3C7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC39.65■■■■□ 3.94
SPHKAPQ2M3C7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC39.65■■■■□ 3.94
SPHKAPQ2M3C7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC39.65■■■■□ 3.94
SPHKAPQ2M3C7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC39.65■■■■□ 3.94
SPHKAPQ2M3C7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC39.63■■■■□ 3.94
SPHKAPQ2M3C7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
SPHKAPQ2M3C7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC39.62■■■■□ 3.93
SPHKAPQ2M3C7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC39.62■■■■□ 3.93
SPHKAPQ2M3C7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC39.62■■■■□ 3.93
SPHKAPQ2M3C7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC39.62■■■■□ 3.93
SPHKAPQ2M3C7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC39.62■■■■□ 3.93
SPHKAPQ2M3C7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
SPHKAPQ2M3C7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC39.61■■■■□ 3.93
SPHKAPQ2M3C7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC39.61■■■■□ 3.93
SPHKAPQ2M3C7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC39.59■■■■□ 3.93
SPHKAPQ2M3C7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
SPHKAPQ2M3C7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC39.58■■■■□ 3.93
SPHKAPQ2M3C7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC39.56■■■■□ 3.92
SPHKAPQ2M3C7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC39.54■■■■□ 3.92
SPHKAPQ2M3C7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
SPHKAPQ2M3C7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC39.53■■■■□ 3.92
SPHKAPQ2M3C7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC39.51■■■■□ 3.92
SPHKAPQ2M3C7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
SPHKAPQ2M3C7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
SPHKAPQ2M3C7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC39.49■■■■□ 3.91
SPHKAPQ2M3C7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC39.49■■■■□ 3.91
SPHKAPQ2M3C7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC39.49■■■■□ 3.91
SPHKAPQ2M3C7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC39.48■■■■□ 3.91
SPHKAPQ2M3C7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC39.48■■■■□ 3.91
SPHKAPQ2M3C7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
SPHKAPQ2M3C7 HLA-V-202ENST00000446817 847 ntBASIC39.47■■■■□ 3.91
SPHKAPQ2M3C7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC39.46■■■■□ 3.91
SPHKAPQ2M3C7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC39.46■■■■□ 3.91
SPHKAPQ2M3C7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC39.46■■■■□ 3.91
SPHKAPQ2M3C7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC39.45■■■■□ 3.91
SPHKAPQ2M3C7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC39.45■■■■□ 3.91
SPHKAPQ2M3C7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
SPHKAPQ2M3C7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
SPHKAPQ2M3C7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
SPHKAPQ2M3C7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC39.43■■■■□ 3.9
SPHKAPQ2M3C7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC39.43■■■■□ 3.9
SPHKAPQ2M3C7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC39.42■■■■□ 3.9
SPHKAPQ2M3C7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC39.41■■■■□ 3.9
SPHKAPQ2M3C7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC39.41■■■■□ 3.9
SPHKAPQ2M3C7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC39.4■■■■□ 3.9
SPHKAPQ2M3C7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC39.4■■■■□ 3.9
SPHKAPQ2M3C7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC39.37■■■■□ 3.89
SPHKAPQ2M3C7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
SPHKAPQ2M3C7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
SPHKAPQ2M3C7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC39.35■■■■□ 3.89
SPHKAPQ2M3C7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC39.35■■■■□ 3.89
SPHKAPQ2M3C7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC39.35■■■■□ 3.89
SPHKAPQ2M3C7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC39.34■■■■□ 3.89
SPHKAPQ2M3C7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC39.34■■■■□ 3.89
SPHKAPQ2M3C7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC39.33■■■■□ 3.89
SPHKAPQ2M3C7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC39.32■■■■□ 3.89
SPHKAPQ2M3C7 AC120057.4-201ENST00000624722 1615 ntBASIC39.31■■■■□ 3.88
SPHKAPQ2M3C7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC39.31■■■■□ 3.88
SPHKAPQ2M3C7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms