Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
HIST1H1CP16403 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
HIST1H1CP16403 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.39■■□□□ 1.5
HIST1H1CP16403 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC24.39■■□□□ 1.49
HIST1H1CP16403 AP002365.1-201ENST00000603448 772 ntBASIC24.39■■□□□ 1.49
HIST1H1CP16403 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
HIST1H1CP16403 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
HIST1H1CP16403 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.36■■□□□ 1.49
HIST1H1CP16403 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
HIST1H1CP16403 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.32■■□□□ 1.48
HIST1H1CP16403 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
HIST1H1CP16403 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
HIST1H1CP16403 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
HIST1H1CP16403 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HIST1H1CP16403 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
HIST1H1CP16403 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.28■■□□□ 1.48
HIST1H1CP16403 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
HIST1H1CP16403 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
HIST1H1CP16403 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
HIST1H1CP16403 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
HIST1H1CP16403 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.26■■□□□ 1.47
HIST1H1CP16403 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
HIST1H1CP16403 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
HIST1H1CP16403 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
HIST1H1CP16403 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
HIST1H1CP16403 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
HIST1H1CP16403 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.22■■□□□ 1.47
HIST1H1CP16403 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
HIST1H1CP16403 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.22■■□□□ 1.47
HIST1H1CP16403 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
HIST1H1CP16403 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
HIST1H1CP16403 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.2■■□□□ 1.47
HIST1H1CP16403 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
HIST1H1CP16403 AL161658.1-201ENST00000623641 1967 ntBASIC24.2■■□□□ 1.46
HIST1H1CP16403 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
HIST1H1CP16403 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
HIST1H1CP16403 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
HIST1H1CP16403 ABCB10P3-201ENST00000561950 2166 ntBASIC24.19■■□□□ 1.46
HIST1H1CP16403 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
HIST1H1CP16403 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
HIST1H1CP16403 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.18■■□□□ 1.46
HIST1H1CP16403 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.18■■□□□ 1.46
HIST1H1CP16403 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
HIST1H1CP16403 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.18■■□□□ 1.46
HIST1H1CP16403 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
HIST1H1CP16403 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
HIST1H1CP16403 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
HIST1H1CP16403 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
HIST1H1CP16403 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HIST1H1CP16403 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
HIST1H1CP16403 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
HIST1H1CP16403 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
HIST1H1CP16403 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HIST1H1CP16403 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HIST1H1CP16403 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
HIST1H1CP16403 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
HIST1H1CP16403 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC24.13■■□□□ 1.45
HIST1H1CP16403 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
HIST1H1CP16403 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
HIST1H1CP16403 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HIST1H1CP16403 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
HIST1H1CP16403 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HIST1H1CP16403 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.11■■□□□ 1.45
HIST1H1CP16403 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC24.11■■□□□ 1.45
HIST1H1CP16403 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
HIST1H1CP16403 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC24.1■■□□□ 1.45
HIST1H1CP16403 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC24.1■■□□□ 1.45
HIST1H1CP16403 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HIST1H1CP16403 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
HIST1H1CP16403 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
HIST1H1CP16403 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.09■■□□□ 1.45
HIST1H1CP16403 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
HIST1H1CP16403 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
HIST1H1CP16403 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
HIST1H1CP16403 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HIST1H1CP16403 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
HIST1H1CP16403 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HIST1H1CP16403 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.06■■□□□ 1.44
HIST1H1CP16403 ST7-AS1-201ENST00000456775 1889 ntBASIC24.06■■□□□ 1.44
HIST1H1CP16403 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
HIST1H1CP16403 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
HIST1H1CP16403 AC139426.1-201ENST00000568218 2529 ntBASIC24.05■■□□□ 1.44
HIST1H1CP16403 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
HIST1H1CP16403 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HIST1H1CP16403 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
HIST1H1CP16403 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HIST1H1CP16403 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
HIST1H1CP16403 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
HIST1H1CP16403 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
HIST1H1CP16403 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
HIST1H1CP16403 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
HIST1H1CP16403 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
HIST1H1CP16403 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
HIST1H1CP16403 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
HIST1H1CP16403 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
HIST1H1CP16403 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
HIST1H1CP16403 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
HIST1H1CP16403 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
HIST1H1CP16403 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
HIST1H1CP16403 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms