Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 AP006261.1-201ENST00000584783 668 ntBASIC24.11■■□□□ 1.45
PPP3CBP16298 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PPP3CBP16298 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PPP3CBP16298 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PPP3CBP16298 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PPP3CBP16298 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PPP3CBP16298 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PPP3CBP16298 RPS2P35-201ENST00000443417 897 ntBASIC24.05■■□□□ 1.44
PPP3CBP16298 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.04■■□□□ 1.44
PPP3CBP16298 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
PPP3CBP16298 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.03■■□□□ 1.44
PPP3CBP16298 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC24.02■■□□□ 1.44
PPP3CBP16298 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PPP3CBP16298 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
PPP3CBP16298 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
PPP3CBP16298 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
PPP3CBP16298 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PPP3CBP16298 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.98■■□□□ 1.43
PPP3CBP16298 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PPP3CBP16298 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.97■■□□□ 1.43
PPP3CBP16298 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.96■■□□□ 1.43
PPP3CBP16298 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.96■■□□□ 1.43
PPP3CBP16298 AL161658.1-201ENST00000623641 1967 ntBASIC23.96■■□□□ 1.43
PPP3CBP16298 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PPP3CBP16298 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.95■■□□□ 1.42
PPP3CBP16298 AL162393.1-201ENST00000437852 946 ntBASIC23.95■■□□□ 1.42
PPP3CBP16298 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PPP3CBP16298 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PPP3CBP16298 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.94■■□□□ 1.42
PPP3CBP16298 MIR3665-201ENST00000578708 105 ntBASIC23.94■■□□□ 1.42
PPP3CBP16298 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PPP3CBP16298 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
PPP3CBP16298 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC23.93■■□□□ 1.42
PPP3CBP16298 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PPP3CBP16298 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PPP3CBP16298 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
PPP3CBP16298 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
PPP3CBP16298 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PPP3CBP16298 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.9■■□□□ 1.42
PPP3CBP16298 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PPP3CBP16298 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.9■■□□□ 1.42
PPP3CBP16298 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PPP3CBP16298 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.89■■□□□ 1.41
PPP3CBP16298 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PPP3CBP16298 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PPP3CBP16298 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PPP3CBP16298 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PPP3CBP16298 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PPP3CBP16298 WASH5P-204ENST00000632292 975 ntBASIC23.88■■□□□ 1.41
PPP3CBP16298 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PPP3CBP16298 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PPP3CBP16298 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
PPP3CBP16298 MIR762-201ENST00000390236 83 ntBASIC23.85■■□□□ 1.41
PPP3CBP16298 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.85■■□□□ 1.41
PPP3CBP16298 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.85■■□□□ 1.41
PPP3CBP16298 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PPP3CBP16298 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PPP3CBP16298 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PPP3CBP16298 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.84■■□□□ 1.41
PPP3CBP16298 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PPP3CBP16298 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PPP3CBP16298 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PPP3CBP16298 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PPP3CBP16298 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.82■■□□□ 1.4
PPP3CBP16298 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
PPP3CBP16298 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PPP3CBP16298 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PPP3CBP16298 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PPP3CBP16298 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PPP3CBP16298 AC005559.1-201ENST00000589661 871 ntBASIC23.8■■□□□ 1.4
PPP3CBP16298 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.79■■□□□ 1.4
PPP3CBP16298 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.79■■□□□ 1.4
PPP3CBP16298 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PPP3CBP16298 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PPP3CBP16298 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PPP3CBP16298 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PPP3CBP16298 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.76■■□□□ 1.39
PPP3CBP16298 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PPP3CBP16298 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.75■■□□□ 1.39
PPP3CBP16298 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PPP3CBP16298 DUX4L28-201ENST00000623687 678 ntBASIC23.75■■□□□ 1.39
PPP3CBP16298 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PPP3CBP16298 AC087741.3-201ENST00000624270 1347 ntBASIC23.73■■□□□ 1.39
PPP3CBP16298 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.72■■□□□ 1.39
PPP3CBP16298 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
PPP3CBP16298 AC044849.2-201ENST00000606596 710 ntBASIC23.72■■□□□ 1.39
PPP3CBP16298 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PPP3CBP16298 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
PPP3CBP16298 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PPP3CBP16298 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.71■■□□□ 1.39
PPP3CBP16298 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PPP3CBP16298 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.71■■□□□ 1.39
PPP3CBP16298 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
PPP3CBP16298 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PPP3CBP16298 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PPP3CBP16298 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.7■■□□□ 1.38
PPP3CBP16298 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
PPP3CBP16298 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.67■■□□□ 1.38
PPP3CBP16298 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PPP3CBP16298 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms