Protein–RNA interactions for Protein: P0CG21

NHLRC4, NHL-repeat-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4P0CG21 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NHLRC4P0CG21 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NHLRC4P0CG21 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NHLRC4P0CG21 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NHLRC4P0CG21 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NHLRC4P0CG21 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NHLRC4P0CG21 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
NHLRC4P0CG21 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NHLRC4P0CG21 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.09■□□□□ 0.81
NHLRC4P0CG21 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.09■□□□□ 0.81
NHLRC4P0CG21 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NHLRC4P0CG21 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NHLRC4P0CG21 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NHLRC4P0CG21 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NHLRC4P0CG21 DUX4L29-201ENST00000425409 679 ntBASIC20.06■□□□□ 0.8
NHLRC4P0CG21 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NHLRC4P0CG21 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NHLRC4P0CG21 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
NHLRC4P0CG21 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.05■□□□□ 0.8
NHLRC4P0CG21 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NHLRC4P0CG21 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NHLRC4P0CG21 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NHLRC4P0CG21 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.04■□□□□ 0.8
NHLRC4P0CG21 MIR4449-201ENST00000578365 66 ntBASIC20.04■□□□□ 0.8
NHLRC4P0CG21 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.04■□□□□ 0.8
NHLRC4P0CG21 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.02■□□□□ 0.8
NHLRC4P0CG21 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NHLRC4P0CG21 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
NHLRC4P0CG21 MIR639-201ENST00000384974 98 ntBASIC20■□□□□ 0.79
NHLRC4P0CG21 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20■□□□□ 0.79
NHLRC4P0CG21 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NHLRC4P0CG21 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NHLRC4P0CG21 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NHLRC4P0CG21 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NHLRC4P0CG21 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.98■□□□□ 0.79
NHLRC4P0CG21 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.97■□□□□ 0.79
NHLRC4P0CG21 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NHLRC4P0CG21 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NHLRC4P0CG21 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NHLRC4P0CG21 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NHLRC4P0CG21 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.94■□□□□ 0.78
NHLRC4P0CG21 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.94■□□□□ 0.78
NHLRC4P0CG21 WASH5P-204ENST00000632292 975 ntBASIC19.94■□□□□ 0.78
NHLRC4P0CG21 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.93■□□□□ 0.78
NHLRC4P0CG21 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NHLRC4P0CG21 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NHLRC4P0CG21 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.93■□□□□ 0.78
NHLRC4P0CG21 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.92■□□□□ 0.78
NHLRC4P0CG21 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.92■□□□□ 0.78
NHLRC4P0CG21 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.91■□□□□ 0.78
NHLRC4P0CG21 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NHLRC4P0CG21 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC19.88■□□□□ 0.77
NHLRC4P0CG21 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.88■□□□□ 0.77
NHLRC4P0CG21 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NHLRC4P0CG21 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NHLRC4P0CG21 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NHLRC4P0CG21 AL161658.1-201ENST00000623641 1967 ntBASIC19.86■□□□□ 0.77
NHLRC4P0CG21 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NHLRC4P0CG21 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
NHLRC4P0CG21 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.85■□□□□ 0.77
NHLRC4P0CG21 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.85■□□□□ 0.77
NHLRC4P0CG21 AC021231.2-201ENST00000594613 730 ntBASIC19.85■□□□□ 0.77
NHLRC4P0CG21 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NHLRC4P0CG21 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
NHLRC4P0CG21 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.84■□□□□ 0.77
NHLRC4P0CG21 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NHLRC4P0CG21 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NHLRC4P0CG21 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NHLRC4P0CG21 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NHLRC4P0CG21 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NHLRC4P0CG21 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.83■□□□□ 0.77
NHLRC4P0CG21 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.83■□□□□ 0.77
NHLRC4P0CG21 MIR3648-2-201ENST00000581792 180 ntBASIC19.83■□□□□ 0.77
NHLRC4P0CG21 MIR3648-1-201ENST00000615959 180 ntBASIC19.83■□□□□ 0.77
NHLRC4P0CG21 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NHLRC4P0CG21 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NHLRC4P0CG21 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NHLRC4P0CG21 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.82■□□□□ 0.76
NHLRC4P0CG21 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NHLRC4P0CG21 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NHLRC4P0CG21 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NHLRC4P0CG21 AC108673.1-201ENST00000510422 1159 ntBASIC19.81■□□□□ 0.76
NHLRC4P0CG21 HSD17B1P1-201ENST00000590052 955 ntBASIC19.81■□□□□ 0.76
NHLRC4P0CG21 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.81■□□□□ 0.76
NHLRC4P0CG21 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.81■□□□□ 0.76
NHLRC4P0CG21 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.81■□□□□ 0.76
NHLRC4P0CG21 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NHLRC4P0CG21 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.8■□□□□ 0.76
NHLRC4P0CG21 AC016575.1-201ENST00000607026 382 ntBASIC19.79■□□□□ 0.76
NHLRC4P0CG21 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NHLRC4P0CG21 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.78■□□□□ 0.76
NHLRC4P0CG21 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NHLRC4P0CG21 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NHLRC4P0CG21 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NHLRC4P0CG21 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NHLRC4P0CG21 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
NHLRC4P0CG21 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.75■□□□□ 0.75
NHLRC4P0CG21 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NHLRC4P0CG21 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.75■□□□□ 0.75
NHLRC4P0CG21 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms