Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
COL1A2P08123 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
COL1A2P08123 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
COL1A2P08123 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
COL1A2P08123 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
COL1A2P08123 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
COL1A2P08123 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
COL1A2P08123 DUX4L28-201ENST00000623687 678 ntBASIC30.25■■■□□ 2.43
COL1A2P08123 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.24■■■□□ 2.43
COL1A2P08123 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
COL1A2P08123 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
COL1A2P08123 AC005559.1-201ENST00000589661 871 ntBASIC30.23■■■□□ 2.43
COL1A2P08123 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.23■■■□□ 2.43
COL1A2P08123 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
COL1A2P08123 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
COL1A2P08123 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
COL1A2P08123 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
COL1A2P08123 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
COL1A2P08123 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.18■■■□□ 2.42
COL1A2P08123 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
COL1A2P08123 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
COL1A2P08123 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
COL1A2P08123 AC087741.3-201ENST00000624270 1347 ntBASIC30.17■■■□□ 2.42
COL1A2P08123 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
COL1A2P08123 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
COL1A2P08123 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.15■■■□□ 2.42
COL1A2P08123 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
COL1A2P08123 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.14■■■□□ 2.41
COL1A2P08123 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
COL1A2P08123 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL1A2P08123 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL1A2P08123 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
COL1A2P08123 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.11■■■□□ 2.41
COL1A2P08123 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
COL1A2P08123 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.08■■■□□ 2.41
COL1A2P08123 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
COL1A2P08123 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.07■■■□□ 2.4
COL1A2P08123 AC044849.2-201ENST00000606596 710 ntBASIC30.06■■■□□ 2.4
COL1A2P08123 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.05■■■□□ 2.4
COL1A2P08123 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
COL1A2P08123 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.03■■■□□ 2.4
COL1A2P08123 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
COL1A2P08123 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
COL1A2P08123 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
COL1A2P08123 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
COL1A2P08123 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30■■■□□ 2.39
COL1A2P08123 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
COL1A2P08123 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
COL1A2P08123 AC120057.4-201ENST00000624722 1615 ntBASIC29.98■■■□□ 2.39
COL1A2P08123 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
COL1A2P08123 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
COL1A2P08123 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.98■■■□□ 2.39
COL1A2P08123 RPS2-209ENST00000529806 993 ntTSL 3 BASIC29.98■■■□□ 2.39
COL1A2P08123 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.98■■■□□ 2.39
COL1A2P08123 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
COL1A2P08123 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.95■■■□□ 2.39
COL1A2P08123 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
COL1A2P08123 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.94■■■□□ 2.38
COL1A2P08123 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
COL1A2P08123 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
COL1A2P08123 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
COL1A2P08123 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
COL1A2P08123 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
COL1A2P08123 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
COL1A2P08123 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
COL1A2P08123 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
COL1A2P08123 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
COL1A2P08123 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
COL1A2P08123 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.87■■■□□ 2.37
COL1A2P08123 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
COL1A2P08123 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.87■■■□□ 2.37
COL1A2P08123 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.86■■■□□ 2.37
COL1A2P08123 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.86■■■□□ 2.37
COL1A2P08123 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
COL1A2P08123 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC29.86■■■□□ 2.37
COL1A2P08123 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
COL1A2P08123 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.85■■■□□ 2.37
COL1A2P08123 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
COL1A2P08123 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
COL1A2P08123 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
COL1A2P08123 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
COL1A2P08123 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
COL1A2P08123 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
COL1A2P08123 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.82■■■□□ 2.36
COL1A2P08123 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.8■■■□□ 2.36
COL1A2P08123 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.8■■■□□ 2.36
COL1A2P08123 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
COL1A2P08123 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.8■■■□□ 2.36
COL1A2P08123 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
COL1A2P08123 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.78■■■□□ 2.36
COL1A2P08123 ABHD17AP4-201ENST00000411545 909 ntBASIC29.77■■■□□ 2.36
COL1A2P08123 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
COL1A2P08123 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
COL1A2P08123 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
COL1A2P08123 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
COL1A2P08123 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
COL1A2P08123 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
COL1A2P08123 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.75■■■□□ 2.35
COL1A2P08123 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
COL1A2P08123 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms