Protein–RNA interactions for Protein: P05388

RPLP0, 60S acidic ribosomal protein P0, humanhuman

Known RBP Predictions only

Length 317 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0P05388 AC087741.3-201ENST00000624270 1347 ntBASIC26.52■■□□□ 1.84
RPLP0P05388 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
RPLP0P05388 AC005559.1-201ENST00000589661 871 ntBASIC26.51■■□□□ 1.83
RPLP0P05388 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RPLP0P05388 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.5■■□□□ 1.83
RPLP0P05388 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.49■■□□□ 1.83
RPLP0P05388 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RPLP0P05388 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
RPLP0P05388 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RPLP0P05388 WASH5P-204ENST00000632292 975 ntBASIC26.46■■□□□ 1.83
RPLP0P05388 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RPLP0P05388 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
RPLP0P05388 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.45■■□□□ 1.82
RPLP0P05388 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.44■■□□□ 1.82
RPLP0P05388 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
RPLP0P05388 AC044849.2-201ENST00000606596 710 ntBASIC26.44■■□□□ 1.82
RPLP0P05388 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
RPLP0P05388 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RPLP0P05388 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
RPLP0P05388 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RPLP0P05388 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RPLP0P05388 ABHD17AP4-201ENST00000411545 909 ntBASIC26.39■■□□□ 1.82
RPLP0P05388 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.39■■□□□ 1.81
RPLP0P05388 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
RPLP0P05388 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RPLP0P05388 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RPLP0P05388 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RPLP0P05388 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RPLP0P05388 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.37■■□□□ 1.81
RPLP0P05388 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RPLP0P05388 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.36■■□□□ 1.81
RPLP0P05388 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.36■■□□□ 1.81
RPLP0P05388 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RPLP0P05388 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.35■■□□□ 1.81
RPLP0P05388 MIR7108-201ENST00000614319 87 ntBASIC26.34■■□□□ 1.81
RPLP0P05388 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RPLP0P05388 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.33■■□□□ 1.81
RPLP0P05388 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RPLP0P05388 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RPLP0P05388 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RPLP0P05388 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RPLP0P05388 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RPLP0P05388 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.31■■□□□ 1.8
RPLP0P05388 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RPLP0P05388 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPLP0P05388 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPLP0P05388 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPLP0P05388 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
RPLP0P05388 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPLP0P05388 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RPLP0P05388 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.27■■□□□ 1.8
RPLP0P05388 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
RPLP0P05388 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
RPLP0P05388 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RPLP0P05388 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.25■■□□□ 1.79
RPLP0P05388 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.24■■□□□ 1.79
RPLP0P05388 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RPLP0P05388 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.23■■□□□ 1.79
RPLP0P05388 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.23■■□□□ 1.79
RPLP0P05388 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
RPLP0P05388 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
RPLP0P05388 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.23■■□□□ 1.79
RPLP0P05388 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RPLP0P05388 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RPLP0P05388 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
RPLP0P05388 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RPLP0P05388 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RPLP0P05388 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RPLP0P05388 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.2■■□□□ 1.78
RPLP0P05388 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RPLP0P05388 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RPLP0P05388 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RPLP0P05388 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RPLP0P05388 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.19■■□□□ 1.78
RPLP0P05388 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.19■■□□□ 1.78
RPLP0P05388 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RPLP0P05388 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.18■■□□□ 1.78
RPLP0P05388 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RPLP0P05388 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.18■■□□□ 1.78
RPLP0P05388 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
RPLP0P05388 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.15■■□□□ 1.78
RPLP0P05388 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.15■■□□□ 1.78
RPLP0P05388 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.15■■□□□ 1.78
RPLP0P05388 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.15■■□□□ 1.78
RPLP0P05388 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.15■■□□□ 1.78
RPLP0P05388 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.15■■□□□ 1.78
RPLP0P05388 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RPLP0P05388 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
RPLP0P05388 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
RPLP0P05388 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
RPLP0P05388 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
RPLP0P05388 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
RPLP0P05388 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RPLP0P05388 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RPLP0P05388 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RPLP0P05388 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.12■■□□□ 1.77
RPLP0P05388 ZNRF2P2-203ENST00000454624 420 ntBASIC26.1■■□□□ 1.77
RPLP0P05388 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
RPLP0P05388 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RPLP0P05388 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms