Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
CHGBP05060 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CHGBP05060 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CHGBP05060 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.9■■■□□ 2.86
CHGBP05060 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.89■■■□□ 2.86
CHGBP05060 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32.89■■■□□ 2.86
CHGBP05060 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.85
CHGBP05060 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
CHGBP05060 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CHGBP05060 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CHGBP05060 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CHGBP05060 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CHGBP05060 WASH5P-204ENST00000632292 975 ntBASIC32.87■■■□□ 2.85
CHGBP05060 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC32.87■■■□□ 2.85
CHGBP05060 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CHGBP05060 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.85■■■□□ 2.85
CHGBP05060 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CHGBP05060 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
CHGBP05060 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC32.83■■■□□ 2.85
CHGBP05060 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CHGBP05060 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.83■■■□□ 2.85
CHGBP05060 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CHGBP05060 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
CHGBP05060 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
CHGBP05060 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
CHGBP05060 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CHGBP05060 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CHGBP05060 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
CHGBP05060 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
CHGBP05060 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.77■■■□□ 2.84
CHGBP05060 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
CHGBP05060 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
CHGBP05060 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
CHGBP05060 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CHGBP05060 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
CHGBP05060 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC32.74■■■□□ 2.83
CHGBP05060 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CHGBP05060 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
CHGBP05060 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC32.72■■■□□ 2.83
CHGBP05060 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CHGBP05060 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
CHGBP05060 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.65■■■□□ 2.82
CHGBP05060 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CHGBP05060 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.65■■■□□ 2.82
CHGBP05060 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CHGBP05060 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC32.64■■■□□ 2.82
CHGBP05060 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CHGBP05060 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC32.62■■■□□ 2.81
CHGBP05060 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
CHGBP05060 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.62■■■□□ 2.81
CHGBP05060 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
CHGBP05060 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
CHGBP05060 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC32.6■■■□□ 2.81
CHGBP05060 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CHGBP05060 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC32.55■■■□□ 2.8
CHGBP05060 AL161658.1-201ENST00000623641 1967 ntBASIC32.55■■■□□ 2.8
CHGBP05060 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
CHGBP05060 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CHGBP05060 NRG1-221ENST00000614767 762 ntTSL 5 BASIC32.54■■■□□ 2.8
CHGBP05060 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CHGBP05060 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.52■■■□□ 2.8
CHGBP05060 DENR-202ENST00000455982 1052 ntTSL 5 BASIC32.51■■■□□ 2.79
CHGBP05060 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC32.5■■■□□ 2.79
CHGBP05060 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.49■■■□□ 2.79
CHGBP05060 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CHGBP05060 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CHGBP05060 MIR762-201ENST00000390236 83 ntBASIC32.48■■■□□ 2.79
CHGBP05060 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC32.48■■■□□ 2.79
CHGBP05060 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC32.48■■■□□ 2.79
CHGBP05060 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CHGBP05060 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CHGBP05060 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CHGBP05060 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
CHGBP05060 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CHGBP05060 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CHGBP05060 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC32.46■■■□□ 2.79
CHGBP05060 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CHGBP05060 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CHGBP05060 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.45■■■□□ 2.79
CHGBP05060 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
CHGBP05060 HNRNPLP2-201ENST00000568980 1570 ntBASIC32.45■■■□□ 2.78
CHGBP05060 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32.44■■■□□ 2.78
CHGBP05060 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
CHGBP05060 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
CHGBP05060 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CHGBP05060 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CHGBP05060 ST7-205ENST00000393446 2114 ntTSL 5 BASIC32.42■■■□□ 2.78
CHGBP05060 AL162393.1-201ENST00000437852 946 ntBASIC32.42■■■□□ 2.78
CHGBP05060 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC32.42■■■□□ 2.78
CHGBP05060 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CHGBP05060 RPS2P35-201ENST00000443417 897 ntBASIC32.39■■■□□ 2.78
CHGBP05060 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC32.37■■■□□ 2.77
CHGBP05060 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CHGBP05060 DUX4L28-201ENST00000623687 678 ntBASIC32.37■■■□□ 2.77
CHGBP05060 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CHGBP05060 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
CHGBP05060 CHML-205ENST00000638160 705 ntTSL 3 BASIC32.36■■■□□ 2.77
CHGBP05060 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC32.36■■■□□ 2.77
CHGBP05060 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC32.35■■■□□ 2.77
CHGBP05060 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms