Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC044849.2-201ENST00000606596 710 ntBASIC30.1■■■□□ 2.41
CHRNA1P02708 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CHRNA1P02708 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CHRNA1P02708 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
CHRNA1P02708 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.08■■■□□ 2.41
CHRNA1P02708 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHRNA1P02708 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHRNA1P02708 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
CHRNA1P02708 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CHRNA1P02708 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.05■■■□□ 2.4
CHRNA1P02708 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.03■■■□□ 2.4
CHRNA1P02708 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CHRNA1P02708 MIR7108-201ENST00000614319 87 ntBASIC30.02■■■□□ 2.4
CHRNA1P02708 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
CHRNA1P02708 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30■■■□□ 2.39
CHRNA1P02708 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30■■■□□ 2.39
CHRNA1P02708 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.99■■■□□ 2.39
CHRNA1P02708 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHRNA1P02708 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.96■■■□□ 2.39
CHRNA1P02708 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHRNA1P02708 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
CHRNA1P02708 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CHRNA1P02708 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.94■■■□□ 2.38
CHRNA1P02708 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.94■■■□□ 2.38
CHRNA1P02708 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
CHRNA1P02708 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CHRNA1P02708 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CHRNA1P02708 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
CHRNA1P02708 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.91■■■□□ 2.38
CHRNA1P02708 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CHRNA1P02708 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.91■■■□□ 2.38
CHRNA1P02708 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CHRNA1P02708 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.9■■■□□ 2.38
CHRNA1P02708 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CHRNA1P02708 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.89■■■□□ 2.38
CHRNA1P02708 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CHRNA1P02708 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.87■■■□□ 2.37
CHRNA1P02708 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHRNA1P02708 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.87■■■□□ 2.37
CHRNA1P02708 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CHRNA1P02708 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
CHRNA1P02708 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CHRNA1P02708 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CHRNA1P02708 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHRNA1P02708 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHRNA1P02708 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHRNA1P02708 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.84■■■□□ 2.37
CHRNA1P02708 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CHRNA1P02708 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CHRNA1P02708 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.83■■■□□ 2.37
CHRNA1P02708 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.83■■■□□ 2.37
CHRNA1P02708 RPS2-209ENST00000529806 993 ntTSL 3 BASIC29.83■■■□□ 2.37
CHRNA1P02708 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CHRNA1P02708 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.82■■■□□ 2.36
CHRNA1P02708 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC29.81■■■□□ 2.36
CHRNA1P02708 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC29.8■■■□□ 2.36
CHRNA1P02708 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CHRNA1P02708 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.8■■■□□ 2.36
CHRNA1P02708 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.8■■■□□ 2.36
CHRNA1P02708 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CHRNA1P02708 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CHRNA1P02708 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
CHRNA1P02708 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.79■■■□□ 2.36
CHRNA1P02708 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHRNA1P02708 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHRNA1P02708 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHRNA1P02708 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.78■■■□□ 2.36
CHRNA1P02708 ZNRF2P2-203ENST00000454624 420 ntBASIC29.78■■■□□ 2.36
CHRNA1P02708 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHRNA1P02708 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.76■■■□□ 2.35
CHRNA1P02708 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CHRNA1P02708 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.75■■■□□ 2.35
CHRNA1P02708 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CHRNA1P02708 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.74■■■□□ 2.35
CHRNA1P02708 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.73■■■□□ 2.35
CHRNA1P02708 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CHRNA1P02708 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CHRNA1P02708 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.71■■■□□ 2.35
CHRNA1P02708 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CHRNA1P02708 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.71■■■□□ 2.35
CHRNA1P02708 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CHRNA1P02708 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.34
CHRNA1P02708 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CHRNA1P02708 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.69■■■□□ 2.34
CHRNA1P02708 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CHRNA1P02708 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.68■■■□□ 2.34
CHRNA1P02708 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.68■■■□□ 2.34
CHRNA1P02708 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CHRNA1P02708 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
CHRNA1P02708 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.67■■■□□ 2.34
CHRNA1P02708 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.66■■■□□ 2.34
CHRNA1P02708 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CHRNA1P02708 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
CHRNA1P02708 HLA-V-202ENST00000446817 847 ntBASIC29.64■■■□□ 2.34
CHRNA1P02708 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CHRNA1P02708 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CHRNA1P02708 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
CHRNA1P02708 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CHRNA1P02708 DUX4L29-201ENST00000425409 679 ntBASIC29.63■■■□□ 2.33
CHRNA1P02708 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.63■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms