Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.45■■□□□ 1.5
CLDN1O95832 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLDN1O95832 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.43■■□□□ 1.5
CLDN1O95832 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
CLDN1O95832 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
CLDN1O95832 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.41■■□□□ 1.5
CLDN1O95832 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CLDN1O95832 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CLDN1O95832 MIR639-201ENST00000384974 98 ntBASIC24.37■■□□□ 1.49
CLDN1O95832 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CLDN1O95832 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CLDN1O95832 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.34■■□□□ 1.49
CLDN1O95832 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC24.34■■□□□ 1.49
CLDN1O95832 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CLDN1O95832 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CLDN1O95832 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.33■■□□□ 1.49
CLDN1O95832 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.32■■□□□ 1.48
CLDN1O95832 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CLDN1O95832 HSD17B1P1-201ENST00000590052 955 ntBASIC24.31■■□□□ 1.48
CLDN1O95832 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CLDN1O95832 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CLDN1O95832 DUX4L29-201ENST00000425409 679 ntBASIC24.3■■□□□ 1.48
CLDN1O95832 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.29■■□□□ 1.48
CLDN1O95832 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.27■■□□□ 1.48
CLDN1O95832 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CLDN1O95832 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CLDN1O95832 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.26■■□□□ 1.47
CLDN1O95832 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CLDN1O95832 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CLDN1O95832 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.25■■□□□ 1.47
CLDN1O95832 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.25■■□□□ 1.47
CLDN1O95832 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CLDN1O95832 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.24■■□□□ 1.47
CLDN1O95832 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CLDN1O95832 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
CLDN1O95832 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.2■■□□□ 1.47
CLDN1O95832 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
CLDN1O95832 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC24.2■■□□□ 1.47
CLDN1O95832 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.18■■□□□ 1.46
CLDN1O95832 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CLDN1O95832 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.18■■□□□ 1.46
CLDN1O95832 AC016575.1-201ENST00000607026 382 ntBASIC24.18■■□□□ 1.46
CLDN1O95832 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.18■■□□□ 1.46
CLDN1O95832 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
CLDN1O95832 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLDN1O95832 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CLDN1O95832 AC021231.2-201ENST00000594613 730 ntBASIC24.17■■□□□ 1.46
CLDN1O95832 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLDN1O95832 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.15■■□□□ 1.46
CLDN1O95832 MIR3648-2-201ENST00000581792 180 ntBASIC24.15■■□□□ 1.46
CLDN1O95832 MIR3648-1-201ENST00000615959 180 ntBASIC24.15■■□□□ 1.46
CLDN1O95832 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CLDN1O95832 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CLDN1O95832 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.13■■□□□ 1.45
CLDN1O95832 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.12■■□□□ 1.45
CLDN1O95832 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.12■■□□□ 1.45
CLDN1O95832 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CLDN1O95832 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CLDN1O95832 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CLDN1O95832 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CLDN1O95832 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.09■■□□□ 1.45
CLDN1O95832 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC24.08■■□□□ 1.45
CLDN1O95832 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CLDN1O95832 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
CLDN1O95832 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CLDN1O95832 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.06■■□□□ 1.44
CLDN1O95832 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CLDN1O95832 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.05■■□□□ 1.44
CLDN1O95832 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CLDN1O95832 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
CLDN1O95832 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.04■■□□□ 1.44
CLDN1O95832 WASH5P-204ENST00000632292 975 ntBASIC24.04■■□□□ 1.44
CLDN1O95832 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CLDN1O95832 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CLDN1O95832 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.03■■□□□ 1.44
CLDN1O95832 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CLDN1O95832 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.01■■□□□ 1.43
CLDN1O95832 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24■■□□□ 1.43
CLDN1O95832 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24■■□□□ 1.43
CLDN1O95832 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24■■□□□ 1.43
CLDN1O95832 CR559946.2-201ENST00000623684 991 ntBASIC24■■□□□ 1.43
CLDN1O95832 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
CLDN1O95832 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLDN1O95832 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLDN1O95832 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC23.97■■□□□ 1.43
CLDN1O95832 DUX4L11-201ENST00000611504 1267 ntBASIC23.96■■□□□ 1.43
CLDN1O95832 DUX4L12-201ENST00000614593 1267 ntBASIC23.96■■□□□ 1.43
CLDN1O95832 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.96■■□□□ 1.43
CLDN1O95832 DUX4L14-201ENST00000621227 1267 ntBASIC23.96■■□□□ 1.43
CLDN1O95832 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CLDN1O95832 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CLDN1O95832 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.94■■□□□ 1.42
CLDN1O95832 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.94■■□□□ 1.42
CLDN1O95832 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLDN1O95832 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLDN1O95832 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CLDN1O95832 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CLDN1O95832 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CLDN1O95832 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLDN1O95832 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms