Protein–RNA interactions for Protein: O60896

RAMP3, Receptor activity-modifying protein 3, humanhuman

Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAMP3O60896 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
RAMP3O60896 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC22.19■■□□□ 1.14
RAMP3O60896 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC22.19■■□□□ 1.14
RAMP3O60896 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RAMP3O60896 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
RAMP3O60896 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAMP3O60896 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.17■■□□□ 1.14
RAMP3O60896 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAMP3O60896 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAMP3O60896 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAMP3O60896 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
RAMP3O60896 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.16■■□□□ 1.14
RAMP3O60896 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAMP3O60896 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAMP3O60896 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
RAMP3O60896 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RAMP3O60896 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RAMP3O60896 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAMP3O60896 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RAMP3O60896 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.1■■□□□ 1.13
RAMP3O60896 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RAMP3O60896 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RAMP3O60896 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RAMP3O60896 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC22.09■■□□□ 1.13
RAMP3O60896 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC22.09■■□□□ 1.13
RAMP3O60896 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RAMP3O60896 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RAMP3O60896 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RAMP3O60896 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
RAMP3O60896 EBPL-203ENST00000378270 579 ntTSL 2 BASIC22.08■■□□□ 1.13
RAMP3O60896 ABCB10P3-201ENST00000561950 2166 ntBASIC22.07■■□□□ 1.12
RAMP3O60896 AL031258.1-201ENST00000623562 325 ntBASIC22.07■■□□□ 1.12
RAMP3O60896 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RAMP3O60896 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAMP3O60896 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
RAMP3O60896 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAMP3O60896 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAMP3O60896 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAMP3O60896 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RAMP3O60896 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RAMP3O60896 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RAMP3O60896 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
RAMP3O60896 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAMP3O60896 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAMP3O60896 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.11
RAMP3O60896 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
RAMP3O60896 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAMP3O60896 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RAMP3O60896 AC139426.1-201ENST00000568218 2529 ntBASIC21.97■■□□□ 1.11
RAMP3O60896 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAMP3O60896 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAMP3O60896 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAMP3O60896 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RAMP3O60896 AL161658.1-201ENST00000623641 1967 ntBASIC21.96■■□□□ 1.11
RAMP3O60896 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.95■■□□□ 1.1
RAMP3O60896 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RAMP3O60896 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RAMP3O60896 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RAMP3O60896 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RAMP3O60896 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.94■■□□□ 1.1
RAMP3O60896 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RAMP3O60896 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RAMP3O60896 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.93■■□□□ 1.1
RAMP3O60896 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAMP3O60896 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
RAMP3O60896 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RAMP3O60896 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.91■■□□□ 1.1
RAMP3O60896 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RAMP3O60896 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAMP3O60896 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.9■■□□□ 1.1
RAMP3O60896 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAMP3O60896 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RAMP3O60896 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAMP3O60896 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAMP3O60896 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAMP3O60896 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAMP3O60896 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAMP3O60896 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.87■■□□□ 1.09
RAMP3O60896 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
RAMP3O60896 ST7-AS1-201ENST00000456775 1889 ntBASIC21.87■■□□□ 1.09
RAMP3O60896 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAMP3O60896 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RAMP3O60896 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.85■■□□□ 1.09
RAMP3O60896 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.85■■□□□ 1.09
RAMP3O60896 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAMP3O60896 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAMP3O60896 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAMP3O60896 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAMP3O60896 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAMP3O60896 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.83■■□□□ 1.09
RAMP3O60896 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.83■■□□□ 1.09
RAMP3O60896 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.83■■□□□ 1.08
RAMP3O60896 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RAMP3O60896 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAMP3O60896 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
RAMP3O60896 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RAMP3O60896 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAMP3O60896 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAMP3O60896 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.8■■□□□ 1.08
RAMP3O60896 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms