Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
HTR3EA5X5Y0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.88■■□□□ 1.57
HTR3EA5X5Y0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.87■■□□□ 1.57
HTR3EA5X5Y0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
HTR3EA5X5Y0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HTR3EA5X5Y0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
HTR3EA5X5Y0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC24.83■■□□□ 1.57
HTR3EA5X5Y0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.83■■□□□ 1.56
HTR3EA5X5Y0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
HTR3EA5X5Y0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
HTR3EA5X5Y0 AL031258.1-201ENST00000623562 325 ntBASIC24.82■■□□□ 1.56
HTR3EA5X5Y0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HTR3EA5X5Y0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HTR3EA5X5Y0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.81■■□□□ 1.56
HTR3EA5X5Y0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HTR3EA5X5Y0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HTR3EA5X5Y0 AP002365.1-201ENST00000603448 772 ntBASIC24.8■■□□□ 1.56
HTR3EA5X5Y0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HTR3EA5X5Y0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
HTR3EA5X5Y0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
HTR3EA5X5Y0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
HTR3EA5X5Y0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
HTR3EA5X5Y0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
HTR3EA5X5Y0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
HTR3EA5X5Y0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC24.74■■□□□ 1.55
HTR3EA5X5Y0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.73■■□□□ 1.55
HTR3EA5X5Y0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HTR3EA5X5Y0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
HTR3EA5X5Y0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC24.73■■□□□ 1.55
HTR3EA5X5Y0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC24.73■■□□□ 1.55
HTR3EA5X5Y0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HTR3EA5X5Y0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HTR3EA5X5Y0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
HTR3EA5X5Y0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HTR3EA5X5Y0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
HTR3EA5X5Y0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.7■■□□□ 1.54
HTR3EA5X5Y0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
HTR3EA5X5Y0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
HTR3EA5X5Y0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.69■■□□□ 1.54
HTR3EA5X5Y0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HTR3EA5X5Y0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
HTR3EA5X5Y0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
HTR3EA5X5Y0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
HTR3EA5X5Y0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
HTR3EA5X5Y0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.67■■□□□ 1.54
HTR3EA5X5Y0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.67■■□□□ 1.54
HTR3EA5X5Y0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
HTR3EA5X5Y0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
HTR3EA5X5Y0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.64■■□□□ 1.54
HTR3EA5X5Y0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.64■■□□□ 1.54
HTR3EA5X5Y0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
HTR3EA5X5Y0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
HTR3EA5X5Y0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HTR3EA5X5Y0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
HTR3EA5X5Y0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
HTR3EA5X5Y0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
HTR3EA5X5Y0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HTR3EA5X5Y0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
HTR3EA5X5Y0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HTR3EA5X5Y0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
HTR3EA5X5Y0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
HTR3EA5X5Y0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HTR3EA5X5Y0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HTR3EA5X5Y0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.55■■□□□ 1.52
HTR3EA5X5Y0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HTR3EA5X5Y0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
HTR3EA5X5Y0 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
HTR3EA5X5Y0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HTR3EA5X5Y0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.53■■□□□ 1.52
HTR3EA5X5Y0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.52■■□□□ 1.52
HTR3EA5X5Y0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
HTR3EA5X5Y0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.5■■□□□ 1.51
HTR3EA5X5Y0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
HTR3EA5X5Y0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
HTR3EA5X5Y0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC24.5■■□□□ 1.51
HTR3EA5X5Y0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
HTR3EA5X5Y0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
HTR3EA5X5Y0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
HTR3EA5X5Y0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
HTR3EA5X5Y0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HTR3EA5X5Y0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC24.46■■□□□ 1.51
HTR3EA5X5Y0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.46■■□□□ 1.51
HTR3EA5X5Y0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
HTR3EA5X5Y0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
HTR3EA5X5Y0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
HTR3EA5X5Y0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
HTR3EA5X5Y0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.45■■□□□ 1.5
HTR3EA5X5Y0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.45■■□□□ 1.5
HTR3EA5X5Y0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
HTR3EA5X5Y0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.43■■□□□ 1.5
HTR3EA5X5Y0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
HTR3EA5X5Y0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HTR3EA5X5Y0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HTR3EA5X5Y0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HTR3EA5X5Y0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC24.41■■□□□ 1.5
HTR3EA5X5Y0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC24.41■■□□□ 1.5
HTR3EA5X5Y0 ABCB10P3-201ENST00000561950 2166 ntBASIC24.41■■□□□ 1.5
HTR3EA5X5Y0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
HTR3EA5X5Y0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.4■■□□□ 1.5
HTR3EA5X5Y0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms