Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.18■□□□□ 0.66
TRBV6-4A0A1B0GX49 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV6-4A0A1B0GX49 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV6-4A0A1B0GX49 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.16■□□□□ 0.66
TRBV6-4A0A1B0GX49 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV6-4A0A1B0GX49 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV6-4A0A1B0GX49 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV6-4A0A1B0GX49 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV6-4A0A1B0GX49 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
TRBV6-4A0A1B0GX49 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.12■□□□□ 0.65
TRBV6-4A0A1B0GX49 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TRBV6-4A0A1B0GX49 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.1■□□□□ 0.65
TRBV6-4A0A1B0GX49 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV6-4A0A1B0GX49 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.1■□□□□ 0.65
TRBV6-4A0A1B0GX49 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV6-4A0A1B0GX49 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV6-4A0A1B0GX49 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV6-4A0A1B0GX49 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
TRBV6-4A0A1B0GX49 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV6-4A0A1B0GX49 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV6-4A0A1B0GX49 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV6-4A0A1B0GX49 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
TRBV6-4A0A1B0GX49 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.06■□□□□ 0.64
TRBV6-4A0A1B0GX49 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV6-4A0A1B0GX49 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV6-4A0A1B0GX49 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TRBV6-4A0A1B0GX49 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.04■□□□□ 0.64
TRBV6-4A0A1B0GX49 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
TRBV6-4A0A1B0GX49 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV6-4A0A1B0GX49 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV6-4A0A1B0GX49 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TRBV6-4A0A1B0GX49 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
TRBV6-4A0A1B0GX49 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.01■□□□□ 0.63
TRBV6-4A0A1B0GX49 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19■□□□□ 0.63
TRBV6-4A0A1B0GX49 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.99■□□□□ 0.63
TRBV6-4A0A1B0GX49 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV6-4A0A1B0GX49 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV6-4A0A1B0GX49 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV6-4A0A1B0GX49 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV6-4A0A1B0GX49 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV6-4A0A1B0GX49 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV6-4A0A1B0GX49 AL133380.1-201ENST00000506013 324 ntBASIC18.97■□□□□ 0.63
TRBV6-4A0A1B0GX49 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV6-4A0A1B0GX49 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRBV6-4A0A1B0GX49 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV6-4A0A1B0GX49 AL161658.1-201ENST00000623641 1967 ntBASIC18.95■□□□□ 0.62
TRBV6-4A0A1B0GX49 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TRBV6-4A0A1B0GX49 WASH5P-204ENST00000632292 975 ntBASIC18.95■□□□□ 0.62
TRBV6-4A0A1B0GX49 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV6-4A0A1B0GX49 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
TRBV6-4A0A1B0GX49 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV6-4A0A1B0GX49 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV6-4A0A1B0GX49 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV6-4A0A1B0GX49 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.93■□□□□ 0.62
TRBV6-4A0A1B0GX49 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV6-4A0A1B0GX49 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.93■□□□□ 0.62
TRBV6-4A0A1B0GX49 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV6-4A0A1B0GX49 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.91■□□□□ 0.62
TRBV6-4A0A1B0GX49 RARRES2P7-201ENST00000567349 469 ntBASIC18.91■□□□□ 0.62
TRBV6-4A0A1B0GX49 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV6-4A0A1B0GX49 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV6-4A0A1B0GX49 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRBV6-4A0A1B0GX49 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV6-4A0A1B0GX49 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.89■□□□□ 0.61
TRBV6-4A0A1B0GX49 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV6-4A0A1B0GX49 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV6-4A0A1B0GX49 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV6-4A0A1B0GX49 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV6-4A0A1B0GX49 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRBV6-4A0A1B0GX49 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV6-4A0A1B0GX49 ABCB10P1-201ENST00000614297 2181 ntBASIC18.86■□□□□ 0.61
TRBV6-4A0A1B0GX49 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TRBV6-4A0A1B0GX49 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV6-4A0A1B0GX49 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.85■□□□□ 0.61
TRBV6-4A0A1B0GX49 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV6-4A0A1B0GX49 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV6-4A0A1B0GX49 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV6-4A0A1B0GX49 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV6-4A0A1B0GX49 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV6-4A0A1B0GX49 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV6-4A0A1B0GX49 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV6-4A0A1B0GX49 SETD8P1-201ENST00000623146 1180 ntBASIC18.84■□□□□ 0.61
TRBV6-4A0A1B0GX49 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRBV6-4A0A1B0GX49 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV6-4A0A1B0GX49 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV6-4A0A1B0GX49 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV6-4A0A1B0GX49 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV6-4A0A1B0GX49 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV6-4A0A1B0GX49 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV6-4A0A1B0GX49 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV6-4A0A1B0GX49 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV6-4A0A1B0GX49 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV6-4A0A1B0GX49 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV6-4A0A1B0GX49 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV6-4A0A1B0GX49 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV6-4A0A1B0GX49 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-4A0A1B0GX49 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-4A0A1B0GX49 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.79■□□□□ 0.6
TRBV6-4A0A1B0GX49 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-4A0A1B0GX49 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms