Protein–RNA interactions for Protein: A0A1B0GVV1

SMIM35, Small integral membrane protein 35, humanhuman

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM35A0A1B0GVV1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.15■■■□□ 2.42
SMIM35A0A1B0GVV1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.15■■■□□ 2.42
SMIM35A0A1B0GVV1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SMIM35A0A1B0GVV1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.14■■■□□ 2.41
SMIM35A0A1B0GVV1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.14■■■□□ 2.41
SMIM35A0A1B0GVV1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
SMIM35A0A1B0GVV1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SMIM35A0A1B0GVV1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SMIM35A0A1B0GVV1 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SMIM35A0A1B0GVV1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
SMIM35A0A1B0GVV1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
SMIM35A0A1B0GVV1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.11■■■□□ 2.41
SMIM35A0A1B0GVV1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SMIM35A0A1B0GVV1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.09■■■□□ 2.41
SMIM35A0A1B0GVV1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.08■■■□□ 2.41
SMIM35A0A1B0GVV1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SMIM35A0A1B0GVV1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SMIM35A0A1B0GVV1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
SMIM35A0A1B0GVV1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
SMIM35A0A1B0GVV1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.07■■■□□ 2.4
SMIM35A0A1B0GVV1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.07■■■□□ 2.4
SMIM35A0A1B0GVV1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
SMIM35A0A1B0GVV1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SMIM35A0A1B0GVV1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SMIM35A0A1B0GVV1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SMIM35A0A1B0GVV1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SMIM35A0A1B0GVV1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SMIM35A0A1B0GVV1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SMIM35A0A1B0GVV1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
SMIM35A0A1B0GVV1 AC044849.2-201ENST00000606596 710 ntBASIC30.04■■■□□ 2.4
SMIM35A0A1B0GVV1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SMIM35A0A1B0GVV1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SMIM35A0A1B0GVV1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.01■■■□□ 2.4
SMIM35A0A1B0GVV1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SMIM35A0A1B0GVV1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
SMIM35A0A1B0GVV1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC29.99■■■□□ 2.39
SMIM35A0A1B0GVV1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SMIM35A0A1B0GVV1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
SMIM35A0A1B0GVV1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
SMIM35A0A1B0GVV1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.96■■■□□ 2.39
SMIM35A0A1B0GVV1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SMIM35A0A1B0GVV1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
SMIM35A0A1B0GVV1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.95■■■□□ 2.39
SMIM35A0A1B0GVV1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.94■■■□□ 2.38
SMIM35A0A1B0GVV1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SMIM35A0A1B0GVV1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SMIM35A0A1B0GVV1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SMIM35A0A1B0GVV1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SMIM35A0A1B0GVV1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
SMIM35A0A1B0GVV1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
SMIM35A0A1B0GVV1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
SMIM35A0A1B0GVV1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SMIM35A0A1B0GVV1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SMIM35A0A1B0GVV1 ABHD17AP4-201ENST00000411545 909 ntBASIC29.89■■■□□ 2.38
SMIM35A0A1B0GVV1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.89■■■□□ 2.38
SMIM35A0A1B0GVV1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
SMIM35A0A1B0GVV1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC29.88■■■□□ 2.37
SMIM35A0A1B0GVV1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
SMIM35A0A1B0GVV1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.86■■■□□ 2.37
SMIM35A0A1B0GVV1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
SMIM35A0A1B0GVV1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SMIM35A0A1B0GVV1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
SMIM35A0A1B0GVV1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SMIM35A0A1B0GVV1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
SMIM35A0A1B0GVV1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.82■■■□□ 2.36
SMIM35A0A1B0GVV1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.8■■■□□ 2.36
SMIM35A0A1B0GVV1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
SMIM35A0A1B0GVV1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SMIM35A0A1B0GVV1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
SMIM35A0A1B0GVV1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SMIM35A0A1B0GVV1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SMIM35A0A1B0GVV1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.77■■■□□ 2.36
SMIM35A0A1B0GVV1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
SMIM35A0A1B0GVV1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.77■■■□□ 2.36
SMIM35A0A1B0GVV1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.76■■■□□ 2.35
SMIM35A0A1B0GVV1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
SMIM35A0A1B0GVV1 MIR7108-201ENST00000614319 87 ntBASIC29.75■■■□□ 2.35
SMIM35A0A1B0GVV1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
SMIM35A0A1B0GVV1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SMIM35A0A1B0GVV1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.74■■■□□ 2.35
SMIM35A0A1B0GVV1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.74■■■□□ 2.35
SMIM35A0A1B0GVV1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SMIM35A0A1B0GVV1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
SMIM35A0A1B0GVV1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
SMIM35A0A1B0GVV1 AC120057.4-201ENST00000624722 1615 ntBASIC29.72■■■□□ 2.35
SMIM35A0A1B0GVV1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.72■■■□□ 2.35
SMIM35A0A1B0GVV1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
SMIM35A0A1B0GVV1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.71■■■□□ 2.35
SMIM35A0A1B0GVV1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.71■■■□□ 2.35
SMIM35A0A1B0GVV1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.71■■■□□ 2.35
SMIM35A0A1B0GVV1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.71■■■□□ 2.35
SMIM35A0A1B0GVV1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.71■■■□□ 2.35
SMIM35A0A1B0GVV1 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
SMIM35A0A1B0GVV1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SMIM35A0A1B0GVV1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SMIM35A0A1B0GVV1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.68■■■□□ 2.34
SMIM35A0A1B0GVV1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.68■■■□□ 2.34
SMIM35A0A1B0GVV1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SMIM35A0A1B0GVV1 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SMIM35A0A1B0GVV1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.65■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms