Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
TRAV19A0A0A6YYK7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
TRAV19A0A0A6YYK7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.37■■■□□ 2.13
TRAV19A0A0A6YYK7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TRAV19A0A0A6YYK7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.37■■■□□ 2.13
TRAV19A0A0A6YYK7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TRAV19A0A0A6YYK7 AC087741.3-201ENST00000624270 1347 ntBASIC28.37■■■□□ 2.13
TRAV19A0A0A6YYK7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TRAV19A0A0A6YYK7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
TRAV19A0A0A6YYK7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
TRAV19A0A0A6YYK7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
TRAV19A0A0A6YYK7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC28.36■■■□□ 2.13
TRAV19A0A0A6YYK7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TRAV19A0A0A6YYK7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.35■■■□□ 2.13
TRAV19A0A0A6YYK7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRAV19A0A0A6YYK7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
TRAV19A0A0A6YYK7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRAV19A0A0A6YYK7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.33■■■□□ 2.13
TRAV19A0A0A6YYK7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRAV19A0A0A6YYK7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.32■■■□□ 2.12
TRAV19A0A0A6YYK7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
TRAV19A0A0A6YYK7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TRAV19A0A0A6YYK7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TRAV19A0A0A6YYK7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
TRAV19A0A0A6YYK7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.3■■■□□ 2.12
TRAV19A0A0A6YYK7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TRAV19A0A0A6YYK7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC28.29■■■□□ 2.12
TRAV19A0A0A6YYK7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
TRAV19A0A0A6YYK7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TRAV19A0A0A6YYK7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRAV19A0A0A6YYK7 AC044849.2-201ENST00000606596 710 ntBASIC28.28■■■□□ 2.12
TRAV19A0A0A6YYK7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TRAV19A0A0A6YYK7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TRAV19A0A0A6YYK7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TRAV19A0A0A6YYK7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRAV19A0A0A6YYK7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TRAV19A0A0A6YYK7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.22■■■□□ 2.11
TRAV19A0A0A6YYK7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TRAV19A0A0A6YYK7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
TRAV19A0A0A6YYK7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
TRAV19A0A0A6YYK7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.2■■■□□ 2.11
TRAV19A0A0A6YYK7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRAV19A0A0A6YYK7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.18■■■□□ 2.1
TRAV19A0A0A6YYK7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.18■■■□□ 2.1
TRAV19A0A0A6YYK7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TRAV19A0A0A6YYK7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.17■■■□□ 2.1
TRAV19A0A0A6YYK7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRAV19A0A0A6YYK7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRAV19A0A0A6YYK7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TRAV19A0A0A6YYK7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRAV19A0A0A6YYK7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TRAV19A0A0A6YYK7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TRAV19A0A0A6YYK7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TRAV19A0A0A6YYK7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
TRAV19A0A0A6YYK7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.12■■■□□ 2.09
TRAV19A0A0A6YYK7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
TRAV19A0A0A6YYK7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TRAV19A0A0A6YYK7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TRAV19A0A0A6YYK7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TRAV19A0A0A6YYK7 ABHD17AP4-201ENST00000411545 909 ntBASIC28.09■■■□□ 2.09
TRAV19A0A0A6YYK7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TRAV19A0A0A6YYK7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.09■■■□□ 2.09
TRAV19A0A0A6YYK7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
TRAV19A0A0A6YYK7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.08■■■□□ 2.09
TRAV19A0A0A6YYK7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TRAV19A0A0A6YYK7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
TRAV19A0A0A6YYK7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.05■■■□□ 2.08
TRAV19A0A0A6YYK7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
TRAV19A0A0A6YYK7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
TRAV19A0A0A6YYK7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
TRAV19A0A0A6YYK7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.03■■■□□ 2.08
TRAV19A0A0A6YYK7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
TRAV19A0A0A6YYK7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
TRAV19A0A0A6YYK7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
TRAV19A0A0A6YYK7 AC120057.4-201ENST00000624722 1615 ntBASIC28.01■■■□□ 2.07
TRAV19A0A0A6YYK7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28■■■□□ 2.07
TRAV19A0A0A6YYK7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
TRAV19A0A0A6YYK7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28■■■□□ 2.07
TRAV19A0A0A6YYK7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28■■■□□ 2.07
TRAV19A0A0A6YYK7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
TRAV19A0A0A6YYK7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.99■■■□□ 2.07
TRAV19A0A0A6YYK7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.99■■■□□ 2.07
TRAV19A0A0A6YYK7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
TRAV19A0A0A6YYK7 MIR7108-201ENST00000614319 87 ntBASIC27.99■■■□□ 2.07
TRAV19A0A0A6YYK7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
TRAV19A0A0A6YYK7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.98■■■□□ 2.07
TRAV19A0A0A6YYK7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
TRAV19A0A0A6YYK7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
TRAV19A0A0A6YYK7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
TRAV19A0A0A6YYK7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.97■■■□□ 2.07
TRAV19A0A0A6YYK7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.97■■■□□ 2.07
TRAV19A0A0A6YYK7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
TRAV19A0A0A6YYK7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.96■■■□□ 2.07
TRAV19A0A0A6YYK7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
TRAV19A0A0A6YYK7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
TRAV19A0A0A6YYK7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.93■■■□□ 2.06
TRAV19A0A0A6YYK7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.93■■■□□ 2.06
TRAV19A0A0A6YYK7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.92■■■□□ 2.06
TRAV19A0A0A6YYK7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
TRAV19A0A0A6YYK7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.91■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms