Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV1A0A0A0MS02 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV1A0A0A0MS02 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV1A0A0A0MS02 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV1A0A0A0MS02 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRGV1A0A0A0MS02 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRGV1A0A0A0MS02 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRGV1A0A0A0MS02 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
TRGV1A0A0A0MS02 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.58■□□□□ 0.72
TRGV1A0A0A0MS02 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRGV1A0A0A0MS02 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRGV1A0A0A0MS02 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.56■□□□□ 0.72
TRGV1A0A0A0MS02 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.56■□□□□ 0.72
TRGV1A0A0A0MS02 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRGV1A0A0A0MS02 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TRGV1A0A0A0MS02 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
TRGV1A0A0A0MS02 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRGV1A0A0A0MS02 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRGV1A0A0A0MS02 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRGV1A0A0A0MS02 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.5■□□□□ 0.71
TRGV1A0A0A0MS02 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRGV1A0A0A0MS02 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRGV1A0A0A0MS02 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
TRGV1A0A0A0MS02 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRGV1A0A0A0MS02 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.48■□□□□ 0.71
TRGV1A0A0A0MS02 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRGV1A0A0A0MS02 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRGV1A0A0A0MS02 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRGV1A0A0A0MS02 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRGV1A0A0A0MS02 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.47■□□□□ 0.71
TRGV1A0A0A0MS02 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRGV1A0A0A0MS02 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRGV1A0A0A0MS02 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.46■□□□□ 0.71
TRGV1A0A0A0MS02 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRGV1A0A0A0MS02 RARRES2P7-201ENST00000567349 469 ntBASIC19.44■□□□□ 0.7
TRGV1A0A0A0MS02 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRGV1A0A0A0MS02 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRGV1A0A0A0MS02 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.43■□□□□ 0.7
TRGV1A0A0A0MS02 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.42■□□□□ 0.7
TRGV1A0A0A0MS02 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRGV1A0A0A0MS02 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRGV1A0A0A0MS02 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TRGV1A0A0A0MS02 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRGV1A0A0A0MS02 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.4■□□□□ 0.7
TRGV1A0A0A0MS02 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.39■□□□□ 0.69
TRGV1A0A0A0MS02 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRGV1A0A0A0MS02 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRGV1A0A0A0MS02 AL133380.1-201ENST00000506013 324 ntBASIC19.36■□□□□ 0.69
TRGV1A0A0A0MS02 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
TRGV1A0A0A0MS02 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRGV1A0A0A0MS02 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.35■□□□□ 0.69
TRGV1A0A0A0MS02 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRGV1A0A0A0MS02 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRGV1A0A0A0MS02 SETD8P1-201ENST00000623146 1180 ntBASIC19.34■□□□□ 0.69
TRGV1A0A0A0MS02 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRGV1A0A0A0MS02 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
TRGV1A0A0A0MS02 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRGV1A0A0A0MS02 AL161658.1-201ENST00000623641 1967 ntBASIC19.32■□□□□ 0.68
TRGV1A0A0A0MS02 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
TRGV1A0A0A0MS02 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
TRGV1A0A0A0MS02 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRGV1A0A0A0MS02 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRGV1A0A0A0MS02 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRGV1A0A0A0MS02 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRGV1A0A0A0MS02 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.3■□□□□ 0.68
TRGV1A0A0A0MS02 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRGV1A0A0A0MS02 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRGV1A0A0A0MS02 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRGV1A0A0A0MS02 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRGV1A0A0A0MS02 WASH5P-204ENST00000632292 975 ntBASIC19.29■□□□□ 0.68
TRGV1A0A0A0MS02 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRGV1A0A0A0MS02 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.28■□□□□ 0.68
TRGV1A0A0A0MS02 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRGV1A0A0A0MS02 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRGV1A0A0A0MS02 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TRGV1A0A0A0MS02 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TRGV1A0A0A0MS02 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRGV1A0A0A0MS02 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRGV1A0A0A0MS02 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRGV1A0A0A0MS02 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRGV1A0A0A0MS02 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRGV1A0A0A0MS02 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRGV1A0A0A0MS02 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRGV1A0A0A0MS02 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRGV1A0A0A0MS02 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRGV1A0A0A0MS02 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.22■□□□□ 0.67
TRGV1A0A0A0MS02 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRGV1A0A0A0MS02 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRGV1A0A0A0MS02 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRGV1A0A0A0MS02 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.22■□□□□ 0.67
TRGV1A0A0A0MS02 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRGV1A0A0A0MS02 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TRGV1A0A0A0MS02 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRGV1A0A0A0MS02 ABCB10P1-201ENST00000614297 2181 ntBASIC19.2■□□□□ 0.66
TRGV1A0A0A0MS02 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRGV1A0A0A0MS02 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRGV1A0A0A0MS02 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRGV1A0A0A0MS02 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRGV1A0A0A0MS02 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.19■□□□□ 0.66
TRGV1A0A0A0MS02 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms