Protein–RNA interactions for Protein: P08949

NMB, Neuromedin-B, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMBP08949 AC026471.1-201ENST00000564629 3026 ntBASIC17.71■□□□□ 0.43
NMBP08949 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.71■□□□□ 0.42
NMBP08949 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NMBP08949 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NMBP08949 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NMBP08949 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.7■□□□□ 0.42
NMBP08949 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.7■□□□□ 0.42
NMBP08949 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NMBP08949 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NMBP08949 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NMBP08949 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.7■□□□□ 0.42
NMBP08949 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NMBP08949 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NMBP08949 AC025884.2-201ENST00000553429 711 ntBASIC17.7■□□□□ 0.42
NMBP08949 MIR3960-201ENST00000583311 91 ntBASIC17.7■□□□□ 0.42
NMBP08949 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NMBP08949 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.7■□□□□ 0.42
NMBP08949 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NMBP08949 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NMBP08949 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NMBP08949 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NMBP08949 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NMBP08949 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.69■□□□□ 0.42
NMBP08949 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NMBP08949 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NMBP08949 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NMBP08949 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NMBP08949 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.69■□□□□ 0.42
NMBP08949 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.69■□□□□ 0.42
NMBP08949 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NMBP08949 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.69■□□□□ 0.42
NMBP08949 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NMBP08949 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NMBP08949 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NMBP08949 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NMBP08949 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NMBP08949 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NMBP08949 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NMBP08949 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NMBP08949 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.68■□□□□ 0.42
NMBP08949 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.68■□□□□ 0.42
NMBP08949 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.68■□□□□ 0.42
NMBP08949 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.68■□□□□ 0.42
NMBP08949 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.68■□□□□ 0.42
NMBP08949 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
NMBP08949 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NMBP08949 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NMBP08949 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.68■□□□□ 0.42
NMBP08949 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
NMBP08949 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NMBP08949 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NMBP08949 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.67■□□□□ 0.42
NMBP08949 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.67■□□□□ 0.42
NMBP08949 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NMBP08949 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NMBP08949 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.67■□□□□ 0.42
NMBP08949 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NMBP08949 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.67■□□□□ 0.42
NMBP08949 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NMBP08949 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NMBP08949 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.67■□□□□ 0.42
NMBP08949 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NMBP08949 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NMBP08949 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.67■□□□□ 0.42
NMBP08949 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NMBP08949 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NMBP08949 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NMBP08949 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NMBP08949 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.67■□□□□ 0.42
NMBP08949 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NMBP08949 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NMBP08949 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NMBP08949 AL157400.5-201ENST00000507624 621 ntBASIC17.66■□□□□ 0.42
NMBP08949 AC060814.1-201ENST00000554326 538 ntBASIC17.66■□□□□ 0.42
NMBP08949 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.66■□□□□ 0.42
NMBP08949 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NMBP08949 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
NMBP08949 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NMBP08949 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NMBP08949 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.66■□□□□ 0.42
NMBP08949 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms